Information report for POPTR_008G080900v3
Gene Details
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Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Citrullus lanatus: Cla97C09G184470
- Glycine max: Glyma.15G265300, Glyma.08G162300
- Gossypium hirsutum: Gohir.D01G085300, Gohir.A01G100800
- Juglans regia: Jr06_11960, Jr06_11950, Jr06_11970, Jr15_08850
- Manihot esculenta: MANES_16G052800
- Medicago truncatula: Medtr2g063480
- Prunus persica: PRUPE_4G125000
- Rosa chinensis: RchiOBHm_Chr5g0023031
- Vitis vinifera: VIT_19s0085g01090
Gene Resources
- Pfam: PF07926
- UniProt: A0A3N7GSG1
- EMBL: CM009297
- InterPro: IPR012929
- PANTHER: PTHR18898 , PTHR18898:SF2
- STRING: 3694.A0A3N7GSG1
Sequences
CDS Sequence
- >POPTR_008G080900v3
ATGGAGGTTTCGGAATTGCACAAGTCGAAGAGGCAGTTGATTGAGTTAGTGGAGCAGAAGGATTTGGAGATTAGTGAGAAGAATGCTACTTTCAATGGTTATCTTGACAAGATTGTCAATTTGACTGATAGAGCAGCAAATAGGGAGGCTCGAATAAGCGAACTTGAGGCAGAGTTGGCCCGTTCTCAGGCTACTTGTACTCGTCTTTTGCAGGAGAAAGAACTTATTGAGAGGCATAATGCATGGCTAAATGATGAATTGACTGCCAAAGTTGACACTCTCATGGAGTTACGCCGAAGGCATGCTGATCTTGAGGAGGATGTATCTACCAAGCTTGCAGATGCAGAGAGACGGTTCAATGAAAGCTCTAGTTCATCGAAGAGGAGCATGGAAAGGGTGAAGGAGTTAGAACTGAAATTGACATCCATGCAGGAGGAATTATGCTCCTCTAGAGATGCTGCTGCAGCCAATGAAGAGCGATTGTCTGCTGAACTCTCAACTGTAAATAAGCTTGTTGAATTGTACAAAGAAAGCTCTGAGGAATGGTCTCAAAAGGCAGGAGAGCTCGAGGGTGTGATCAAAGCTCTAGAAACACATTTGAGTCAAGTTGAAAATGACTACAAAGAGAGATTGGAGAAGGAAATATCTGCTCGAAAACAATTAGAGAAGGAGGCGGGGGATTTGAAAGACAAACTTGAAAGGTGCGAAGCTGATATTGAAAGTAGCAGGAAAACTAATGAACTGAGTCTTCTTCCTCTCAACAGTTACACTACAGAAAGATGGATGGATCCGCTCAATAATGATGATCTTGCTGATGGTAACAGCATGGTTGTCTCCAAGATCCCAGTTGGTGTTTCAGGAACTGCATTAGCAGCTTCTCTGCTCCGTGATGGTTGGAGTCTGGCTAAAATGTATGCAAAGTACCAAGAAGCGGTTGATGCTCTTCGCCATGAGCAATTGGGAAGGAAGGAATCAGAGGCAGTACTGCAACGGGTTTTGTGTGAACTAGAGGAGAAAGCAGGTGTAATTTTGGATGAAAGAGTTGAATATGAGAGAATGGTAGAATCATACTCTGTCATCAACCAAAAATTGCAGCACTCATTTTCTGAACAGGCAAACCTAGAGAAAACAATCCAAGAATTAAAGGCAGATTTGAGGAGGCATGAACGTGGTTACAGTTTTGCTCAAAAGGAAATTGTTGATCTTCAGAAACAGGTGACAGTTCTTCTAAAGGAATGTCGTGATATACAACTTCGGTGTGGATCTTCTGGGCATGACCAAGTTGATAATAGCAAAGCAATTGCTCCTGTCGGAATGGGCGTAGAGTCTGATCCTGAAAATGCAATCTTGGAACGCCTTACCTTCAAGGATATAAATGGGTTAGTTGAGCAGAATGTTCAGCTCAGGAGCCTTGTGCGTAATCTTTCAGATCAGATTGAAGATAGGGAGACGGTGTTCAAGGAAAAAATTGAAATGGAACTCAAAAAACACACTGATGAAGCTGCCTCCAAAGTTGCTGCTGTGTTACAAAGAGCTGAAGAGCAGGGTCACATGATTGAATCACTCCACACTTCTGTTGCAATGTACAAAAGGTTGTATGAAGAGGAACACAAACTTCGCTCATCTTATTCCCGCTCTTCAGATGCAGCTCCAGTTGAAGAGGATGGAAGAAGGAACCGTTTACTTCTGCTTGAAGATTCTCAGGAAGCTACTAAGAAGGCCCAGGAAAAGGCTGCTGAGCGATTAAGATCTCTTGAGGAAGATTTGGCGAAATCTAAGAGTGATATTATATTACTACGATCAGAACGTGACAAGATGGCTCTGGATGCTAAATTCGCTAGAGAAAGACTTGATAGTTATATGAAAGAATTTGAACATCAGAGAAATGAAATGAATGGTGTTTTATCAAGAAATGTGGAGTTTTCACAGTTGATAGTTGACCATCAAAGAAAGTTGCGTGAAAGTTCAGAAAATTTGGTTGCATCTGAGGAACTTTCTCGGAAGTTAAATATGGAGGTGTCTGTTCTAAAGCTTGAAAAGGAGATTTTGTCAAATGCTGAAAAGAGAGCATGTGATGAAGTTCGTAGTTTGTCGGAGAGGGTTTATCGCCTTCAGGCTACTTTGGACACTATTCAGAGTGCCGAGGAGGCTCGTGAGGAAGCAAGAGCTGCTGAGAAGAGGAAACAAGAGGAGTATGTAAAAAAAATTGAGAGGGAATGGACTGAGGCCAAGAAAGAGCTGCAACAGGAGCGGGACAATGTTAGAGCTCTCACATCTGACCGTGAACAGACGTTGAAGAATGCCATGAGGCAAATTGATGACATGGGGAAGGAATTGGCTAATACGTTGCATGCTGTTTCTGCTGCTGAAACTAGGGCTGCTGTTGCTGAGACCAAACTCTCTGAGCTGGAGAAGAAGATGAAAGTTTCGGATGCTAAGACTGCCAGTATGAATGACAGTGGCATATCTTCTTCTATTTCGGCTACTGAGGTTGTTACGGATTTGCTTATGGCAAAGGACGAGATACAAAAATTAAAAGAGGAAGCTCGGGCTAGCAAGGAGCACATGCTACAGTATAAGAGTATAGCACAGGTGAATGAAACTGCTCTAAAGCAAATGGAAGATGCCCATGAAAACTTCAAGAAAGAGTCAGAGAAGTTAAAGGAATCACTAGAAAATGAACTTCTTTCTCTGCGGGGGAGGATCTCAGAACTCGACAGCGAATTTAGTAAGAAGTCTGAAGAGGTGGCCTCTGCGGCTGTAGGAAAAGCTGAGGCTTTTGCTTCTGCTTTGGCAGAAATTACCTGTTTGAAGGAAGAAAACTGTAGTAAAACCTCTCAAATTGTAGCGTTGGAATCTCAAATTTCTGCTTTGAAAGAGGATTTGGAAAAGGAGCATGAACGTTGGCGTGCTGCTCAAGCCAATTATGAAAGACAGGTTATTCTACAATCTGAGACAATTCAGGAGTTGACAAAGACATCACAAGCTTTATCCTTGCTACAACAAGAAGCATCTGACCTTCGTAAATTGGTGGATGCACAGAAAAGTGCAAATGACGAGCTTAAGTCTAAGTGGGAGGTAGAGAAATCAATGATTGAAGAATCAAAAAATCAAGCAAAGAAGAAATATGATGAACTGAATGAACAGAACAAATTGCTGCATAGCCGGCTTGAGGCTATTCACATTCAATTGGCTGAGAAGGATCGAAATGCTGCTGGAATTTCTTCTGGAAGCAATGCTCCAGGATTAGGCAGCGATGCTGGGTTGCAGAATGTGGTTAACTATCTTCGAAGGTCAAAGGAAATAGCAGAAACAGAGATTTCTTTGCTAAAACAGGAAAAGCTTCGACTGCAATCACAACTTGATGGTGCTCTGAAGGCTGCAGAAACTGCCCAGGCTTCCCTTCATACTGAGCGTGCAAATTCAAGGACATTATTGTTCTCAGAGGAAGAGATAAAATCCCTTCAACTTCAGGTTAGAGAATTGACCTTGCTTCGTGAAAGCAACATGCAATTGAGAGAGGAAAACAAGCACAACTTTGAGGAATGCCAGAAATTGCGTGAAGTAGCACAAAATACTAAAGCACAGTCTGACAAGCTAGAATCTCTATTGAGGGAGAGGCAAATTGAGGTTGAAGCTTGTAAGAAGGAAATTGAAATGGACAAGGTGGAGAAAGATCACTTGGAAAAGAGAATGTCCGAGCTACTTGAGAGATGTAGAAATATTGACGTGGAAGATTACAATAGGATGAAGGATGATCTTAGACAGATGGAGGAAAAATTGAGAGAGAAGGATGCTGAGATGGAGGGAATTAAGAATCTTGTATCCGAACAGCAGGAAAAAATACTGAAATTGGAGCAAGACCTTGCCAAGAGTGAATCAGAATTGAACCAAAGAGAGAGAAGGATAAGTGACATTTTGCAAACAGAGGCTAGTCTCAGATCTGAGCTGGAGAAGCAGAAGAAGCTGTCTGTTCAGTGGAAGAAAAAATCTGAAATCTTATCAAAGGAGAAGGAAGAATTTAGCAAAGAAAAACAAGCACTCATCAAACAGATTGAGGACTTGAAACAAGGTAAAAGATTGCTGGGAAATGTTACTGGCGAGCAGGTCTTGAAGGAAAAGGAGGAAAAAGAACACAGAATACAGATTCTGGAGAAAACTGTCGAGAGGCTAAGAGAGGAGTTGAAAAGGGAGAGAGAGGATCTTCGGACCGAGAAATCAAAGCGTCAGATTACAGAGAAGGCTGTTTTAGATTCCTACAAAAATGTTGAGCAGACGAAGACAAAGTTGGAGGATAAACTTGAGTTGCATAAGCAGGTTCTGAAGCGCATATCAGATGAACTGGAAAAGCTTAAGCATGCAGAAGGCAATCTTCCAGAGGGCACCTCTGTGGTTCAGCTTCTTTCTGGGACCATCTTGGATGATCTAGCTGCCACCTATGTATCAGCTATCGAGAACTTTGAAAGGGTAGCACTTTCTGTTTCCTCTGAACTTGGAGCTGGTGTCCAATCAGTGGAGAATCCTTTGATTCCAGATGCTTCTGCCACTGTTACTCCTGGTCAGGCAGTTCCTTCTCAGGCTACCATCGTTTCCCCAGTAGCTCCTCATGCTCACTTACCTACTAAAATGGCCGAAGAGAAGGAGAGAAAAGTTCCTGTACCCAAACCCAATGTTGAAACTCGTAAGGCAGGGAGGAAGCTGGTAAGACCCCGGCTTGTTAGACCTGAAGAGCCTCCAAGCGATGTTGAGATGTCAGAGGTGGATGGATCTACTAGTGTGGCAAAGCTTACACCCGCTAGCGAGTCTGAAACTCAACACAATATCACACTATTTTCTCAGCCAATAGCCCGCAAGCGCCTTGCTTCATCTAGTTCTGACTTGAACGAGCAGCCCCTTAATCAAGGAGAGACTAGCTCTGATGTTCCACCACCTGTTTTGAAGAGACCAAAAGGTACTGATTCCGTGCAAGAAGGTAGTGAAGGACAAGCTGCCACTCCATCAGAGACTCTGGTGACACTTCCGGCGGTGGAAGAATCAGCTGTCGCTGATTTGTCTCAAGGTGAAGAGGAAGCTGTTGCAGAAAAGGAAGAGGTTGAGACTTCCGGAGAGAAAGCAGAACCTCCAAAAGAATCTGAACAATTAGATGACACAACTCAAGTTGAACCAGAGAATGAGACAAATGAAGTTGCTGAAGAGATTTTGGATAAACCAAGTGAAAGTGGAATGGAAATTTATGATGGTTCAAAGGATCATGCTACTGCAGAAGACAACCAACAATTACCTGTGGAGTTTGAAAATGAGAGGGAAGAGGGGGAACTAGTTGCAGAAGTCGAGGAAGGCGCTGATATGTCAAACATGGCAGGGAGCCCGGAAACTGGGGAAGTTCTTCCTGACACTACTCCTGTGGCTTCACCAGCTAGGATTGATGATGAAGCTATGGTTCCTGTGGGAATGGAGTCAGGTGAGATTAATTCTCCTGAGATGATCACTGATGAGAAGAATGACGAGGGTGATATAGTTGAAGAAATTGGTGAAGGTTCCGACAAGTCAAATGATGGTGGTGACCAGATAGCTGTGGAGACTGATCAGAGTCCTGAGGCTGCTTCAGTCGCTGGAGAGAGAACAACAGCTACTGCCAATACAGAAATGGATGCATCAAAACAAGCTAGTTCCAGTGGAGCAGAGGCAGAAGAGGTTAGACAGGTATCACCTGCAAGTAACACCTCTACTGTTGTGAATTTAGCAGAGCGAGCTAGGCAGAGGGCAATGCTGAGACAGGGTGGAGGTGGAGCTCCTGCAGTACTTTCTCCTCCAAGCGGTAGAGGCCGTGGAAGAGTTCTACGTGGTCGAATAGCACGTGGTGCACGTGGTGGACGTGGTGGGCGAAGTGGACGTGGACAAACTCCCGGTCAACAGGGTTAA
Protein Sequence
- >POPTR_008G080900v3
MEVSELHKSKRQLIELVEQKDLEISEKNATFNGYLDKIVNLTDRAANREARISELEAELARSQATCTRLLQEKELIERHNAWLNDELTAKVDTLMELRRRHADLEEDVSTKLADAERRFNESSSSSKRSMERVKELELKLTSMQEELCSSRDAAAANEERLSAELSTVNKLVELYKESSEEWSQKAGELEGVIKALETHLSQVENDYKERLEKEISARKQLEKEAGDLKDKLERCEADIESSRKTNELSLLPLNSYTTERWMDPLNNDDLADGNSMVVSKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAVLQRVLCELEEKAGVILDERVEYERMVESYSVINQKLQHSFSEQANLEKTIQELKADLRRHERGYSFAQKEIVDLQKQVTVLLKECRDIQLRCGSSGHDQVDNSKAIAPVGMGVESDPENAILERLTFKDINGLVEQNVQLRSLVRNLSDQIEDRETVFKEKIEMELKKHTDEAASKVAAVLQRAEEQGHMIESLHTSVAMYKRLYEEEHKLRSSYSRSSDAAPVEEDGRRNRLLLLEDSQEATKKAQEKAAERLRSLEEDLAKSKSDIILLRSERDKMALDAKFARERLDSYMKEFEHQRNEMNGVLSRNVEFSQLIVDHQRKLRESSENLVASEELSRKLNMEVSVLKLEKEILSNAEKRACDEVRSLSERVYRLQATLDTIQSAEEAREEARAAEKRKQEEYVKKIEREWTEAKKELQQERDNVRALTSDREQTLKNAMRQIDDMGKELANTLHAVSAAETRAAVAETKLSELEKKMKVSDAKTASMNDSGISSSISATEVVTDLLMAKDEIQKLKEEARASKEHMLQYKSIAQVNETALKQMEDAHENFKKESEKLKESLENELLSLRGRISELDSEFSKKSEEVASAAVGKAEAFASALAEITCLKEENCSKTSQIVALESQISALKEDLEKEHERWRAAQANYERQVILQSETIQELTKTSQALSLLQQEASDLRKLVDAQKSANDELKSKWEVEKSMIEESKNQAKKKYDELNEQNKLLHSRLEAIHIQLAEKDRNAAGISSGSNAPGLGSDAGLQNVVNYLRRSKEIAETEISLLKQEKLRLQSQLDGALKAAETAQASLHTERANSRTLLFSEEEIKSLQLQVRELTLLRESNMQLREENKHNFEECQKLREVAQNTKAQSDKLESLLRERQIEVEACKKEIEMDKVEKDHLEKRMSELLERCRNIDVEDYNRMKDDLRQMEEKLREKDAEMEGIKNLVSEQQEKILKLEQDLAKSESELNQRERRISDILQTEASLRSELEKQKKLSVQWKKKSEILSKEKEEFSKEKQALIKQIEDLKQGKRLLGNVTGEQVLKEKEEKEHRIQILEKTVERLREELKREREDLRTEKSKRQITEKAVLDSYKNVEQTKTKLEDKLELHKQVLKRISDELEKLKHAEGNLPEGTSVVQLLSGTILDDLAATYVSAIENFERVALSVSSELGAGVQSVENPLIPDASATVTPGQAVPSQATIVSPVAPHAHLPTKMAEEKERKVPVPKPNVETRKAGRKLVRPRLVRPEEPPSDVEMSEVDGSTSVAKLTPASESETQHNITLFSQPIARKRLASSSSDLNEQPLNQGETSSDVPPPVLKRPKGTDSVQEGSEGQAATPSETLVTLPAVEESAVADLSQGEEEAVAEKEEVETSGEKAEPPKESEQLDDTTQVEPENETNEVAEEILDKPSESGMEIYDGSKDHATAEDNQQLPVEFENEREEGELVAEVEEGADMSNMAGSPETGEVLPDTTPVASPARIDDEAMVPVGMESGEINSPEMITDEKNDEGDIVEEIGEGSDKSNDGGDQIAVETDQSPEAASVAGERTTATANTEMDASKQASSSGAEAEEVRQVSPASNTSTVVNLAERARQRAMLRQGGGGAPAVLSPPSGRGRGRVLRGRIARGARGGRGGRSGRGQTPGQQG