Information report for POPTR_005G207700v3
Gene Details
|
|
Functional Annotation
- Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.
Homologous
- Citrus sinensis: orange1.1g002629m, orange1.1g002390m, orange1.1g002737m
- Fragaria vesca: mrna22728.1-v1.0-hybrid
- Malus domestica: MDP0000153538
- Prunus mume: XP_008229616.1
- Prunus persica: Prupe.3G182900.4.p, Prupe.3G182900.3.p, Prupe.3G182900.2.p, Prupe.3G182900.1.p
- Rosa chinensis: RchiOBHm_Chr2g0152951
- Ziziphus jujuba: XP_015880673.1, XP_015880672.1
Gene Resources
- Pfam: PF02309 PF06507 PF02362
- UniProt: B9H868
- EMBL: CM009294
- AlphaFoldDB: B9H868
- KEGG: pop:7464667
- OMA: LNMPETN
- InterPro: IPR003340 , IPR010525 , IPR015300 , IPR033389 , IPR044835 , IPR053793
- PANTHER: PTHR31384 , PTHR31384:SF150
- SUPFAM: SSF101936 , SSF54277
- PROSITE: PS50863 , PS51745
- Gene3D: 2.30.30.1040 , 2.40.330.10 , 3.10.20.90
- OrthoDB: B9H868
- SMR: B9H868
- CDD: cd10017
- eggNOG: ENOG502QSCZ
- STRING: 3694.B9H868
Sequences
CDS Sequence
- >POPTR_005G207700v3
ATGAGACTTTCTTCTTCTTCTTCTTCTACTGGGTTTAATCAGCAGACTCCAGAAGGGGATAAAAAATGTTTGAATTCTGAGCTATGGCATGCATGCGCGGGGCCTCTTGTGTCTCTGCCTCACGTTGGAAGCCGAGTTGTGTACTTTCCACAGGGTCATAGTGAACAGGTTGCTGCTTCAACCAACAAGGAAGTTGATGCTCACATCCCTAATTACCCAAGCTTGCCTCCACAACTAATCTGCCAGCTTCACAATGTTACTATGCATGCTGATGTTGAGACAGACGAAGTTTATGCTCAAATGACCTTGCAGCCATTAAGTCAGGACGATCAAAAGGATGCTTACCTATTGCCAGCAGAGCTAGGTACTGCCAGCAAACAGCCGACTAACTATTTCTGTAAAACATTGACTGCAAGTGATACTAGCACTCACGGAGGATTTTCTGTTCCTCGACGAGCAGCTGAAAAAGTCTTTCCTACTCTTGATTACTCCCAGACGCCTCCAGCTCAAGAACTAATTGCAAGAGATCTTCATGATAATGAGTGGAAATTCAGACATATATTTCGAGGACAACCCAAGAGGCATCTTCTTACAACAGGATGGAGTGTCTTTGTTAGTGCAAAGAGGCTTGTTGCTGGTGATTCTGTCCTTTTCATTTGGAATGAGAAGAACCAATTACTCTTGGGTATTCGGCGAGCGAATCGTCCTCAAACTTTCATGCCTTCGTCAGTTTTATCAAGTGATAGCATGCATATAGGTCTTCTTGCTGCTGCAGCTCATGCAGCAGCCACTAATAGCCGTTTTACAATATTTTATAACCCCAGGGCTAGTCCTTCAGAATTTGTCATTCCCCTGGTCAAGTATATTAAAGCAGTATACCATACAAGGGTTTCTGTGGGCATGAGATTTAGGATGCTATTTGAGACAGAAGAGTCAAGTGTCCGCCGATACATGGGTACTATAACTGGTATTAGTGATTTAGATCCTGTTCGCTGGCCAAATTCACATTGGCGCTCTGTCAAGGTTGGCTGGGATGAATCCACTGCAGGGGAGAGGCAGCCAAGAGTATCTTTGTGGGAGATTGAGCCGTTAACAACATTCCCAATGTATCCATCTGCCTTCCCTATGAGACTGAAAAGGCCATGGCCATCTGGGCTACCGTCTTTCCATGGTCTGCAAGATGGTGATTTGAACATTAATTCACCAATGATGTGGCTTCAAGGAGGGGTTGGAGATCTGGGAGTTCAATCTTTGAACTTCCAGAGCTTTGGTGTTGCTCCTTGGATCCAGCCAAGGTTTGATACTTCTATGCCAGCTCTACAACCTGAAATGTACCAAACAATGGCAGCTGCTGCACTTCAGGAAATGCGAACAGTGGAATCTTCCAAACTAGCTTCTCAATCTCATTTGCAGTTCCAACAATCTCAAAATGTATCTAATGGGCCTGCTGCTTTGATTCAGAGGCAGATGTTGCAGCAGTCCAATCTTCAGCACGCACTTCTTCAAAACTTTCAAGAAAACCAGGCTTCAACACAGGCCCAGTTTCTACAACAACATTTGCAGCATCGCAATCAGTATACTGGTCAGCAGCTGCAACAGCATCAACCACAGCTGCAGCAAGTTCAACAGCCTAAACAACTGAATGAATTGTCTGCCCCACAGCAGATCCCGAATGTAATATCAGCTCTGCCTCATCTTACTTCAGTCGCCCCATCCCAGTCTCCATCTTTGCAGCCAATTTCTTCCCAGTGCCAGCAGCAGGCCTTTTCAGAACCACTTGGAAACTCAATTGCTGCATCTGATGTTTCTTCAATGCACAGTGTCATTGGTTCATTATCCCAGGATGGAGGATCCCACTTGCTTAATTCTAATGGATCCAACCCTGTCATCTCCCCTGCTTTATTATCAAAGCGAGCAGCAATTGATCCACAGCTTTCTTCTGGTGCTGCTCATTGTGCGCTACCCCAGGTTGAACAGTTGAGAACTACACAATCAACTGTGTCTGATCTTGCTACCTTGTTAGCTCCATTCTCTGGAAGAGAGTATTCTACCTATCAAGGTGCTAATGATCCACAAAACAATCTGCTGTTTGGAGTTAACATTGATTCTTCAACCTTCATGCTTCAGCATGGGATACCAAACCTGAGAAATATTGGCACTGAAAATGATCCGTTGTCTATGCCATTTGCTGCTTCAACTTTTACAAGTGCTACTGGAAGTGATATTCCACTTAATTCAGACATGACAGCTTCAAGTTGTGTAGATGAATCAGGTTTCTTACAGTCCTCTGAAAATGTGGATCAAGTAAACCCATCAACAAGAACCTTTGTGAAGGTTCACAAGTCAGGGTCCTACGGGCGATCACTAGATATTTCCAAGTTCAGCAGCTATGATGAGCTTCGCAGTGAGCTTGCTCGCTTGTTTTGCCTAGAAGGCCTATTAGAGGACCCACAGAGATCAGGCTGGCAGCTTGTATTTGGTGACCGGGAGAACGATGTGCTTCTCCTTGGTGATGATCCTTGGCAGGAATTTGTGAACAATGTCTGGTATATCAAGATCCTATCTCCTCTTGAAGTGCAACAAATGGGCAAAGAAGGTCTCAGTCCTGCAGCTTCTGTCCCAAGCCAAAAGCTTTCTAATAGCAACAGCGATGGGCACATGAATACGCAGGGTTTTAGAAACTCAAGCAATGGGATTGCATCTATGGGGTCTCTTGACTACTAA
Protein Sequence
- >POPTR_005G207700v3
MRLSSSSSSTGFNQQTPEGDKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPMRLKRPWPSGLPSFHGLQDGDLNINSPMMWLQGGVGDLGVQSLNFQSFGVAPWIQPRFDTSMPALQPEMYQTMAAAALQEMRTVESSKLASQSHLQFQQSQNVSNGPAALIQRQMLQQSNLQHALLQNFQENQASTQAQFLQQHLQHRNQYTGQQLQQHQPQLQQVQQPKQLNELSAPQQIPNVISALPHLTSVAPSQSPSLQPISSQCQQQAFSEPLGNSIAASDVSSMHSVIGSLSQDGGSHLLNSNGSNPVISPALLSKRAAIDPQLSSGAAHCALPQVEQLRTTQSTVSDLATLLAPFSGREYSTYQGANDPQNNLLFGVNIDSSTFMLQHGIPNLRNIGTENDPLSMPFAASTFTSATGSDIPLNSDMTASSCVDESGFLQSSENVDQVNPSTRTFVKVHKSGSYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLSPAASVPSQKLSNSNSDGHMNTQGFRNSSNGIASMGSLDY