Information report for POPTR_005G179500v3
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Actinidia chinensis: CEY00_Acc28201
- Capsicum annuum: T459_08555
- Citrullus lanatus: Cla97C08G156060
- Cucumis melo: MELO3C011203
- Glycine max: Glyma.14G132500, Glyma.04G074300, Glyma.06G075500
- Gossypium hirsutum: Gohir.A13G181900, Gohir.D13G185401
- Juglans regia: Jr11_28260
- Manihot esculenta: MANES_18G079200
- Nicotiana attenuata: A4A49_14084
- Prunus avium: Pav_sc0003562.1_g090.1.mk
- Prunus persica: PRUPE_1G462800
- Rosa chinensis: RchiOBHm_Chr6g0312261
- Solanum lycopersicum: Solyc03g078390.3
- Vitis vinifera: VIT_04s0008g03170
Gene Resources
- Pfam: PF00443
- UniProt: B9H7G5
- RefSeq: XP_002306642.1
- EMBL: CM009294
- AlphaFoldDB: B9H7G5
- OMA: GSCEEMP
- InterPro: IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50235 , PS51283
- Gene3D: 3.30.2230.10 , 3.90.70.10
- OrthoDB: B9H7G5
- CDD: cd01795 , cd02668
- eggNOG: KOG1863
- STRING: 3694.B9H7G5
- HOGENOM: CLU_010287_0_0_1
Sequences
CDS Sequence
- >POPTR_005G179500v3
ATGACTCCACCAGCTACGCGAGGTAAAAATAAAAGGAATAGACCGGGTGATATTGCTAATATCACTTCTGAAATATTAAGGAAAATTCATGCAAATGGTAAAGTTACCGATGGAGATGTGAACCAGCTGTACATGATATGGAAGCCAGTTTGTCAAGGCTGCCGTGTGAATACTAAAGATAACCCTAACTGCTTTTGTGGATTGATTCCACCACCCAATGGAAGTCGTAAATCTGGCTTGTGGCAGAAAATGTCTGATATTCTTCAAGCGCTTGGCTCAGACCCATTCAATGATCTTCGTAGTACTGATGAAACTCCGTCTGGTCTAACTAATCTGGGAGCAACATGCTATGCCAATAGTGTACTTCAGTGTCTGTACATGAACGCCTCGTTTCGAGAAGGTGTTTTCTCTGTTGAGCCAGATGTGTTAAACGAACAGCCTGTGTTATATCAGCTTGTCCGGCTTTTTGCACAGTTGCATGCTAGTAAATTAGCTTTTATTGATCCAGCTCCATTTATAACGACCCTGGAGCTGGATAATGCAGTTCAGCAGGATGGCCATGAGTTCCTGACCTTGCTTCTTTCACTGCTTGAACGTTGTCTGAGCCACTCTAAAGTTTCTAAGGCGAGAACAATTGTTCAAGATCTTTTTCGAGGAAGTGTATCACAAGTAACAACGTGCTCAAATTGTGGAAGAGATTCTGAAGCATCTTCCAAAACTGAAGACTTCTACGAGCTGCAGATGAATGTCAAAGGCTTGAAAAGCTTAGACGAGAGTTTGGATCAGTACCTTAGTGTGGAACAGCTTCATGGAGAGAATCAATACAATTGTGAATTGTGTAAAAGCAGAGTCGATGCTACTCACCGCATCAGGCTGCGAACTCTACCTGATGTCCTTAATTTTCAGCTTAAGCGTTACGAGTTCCTTCCAAAGACTACTACAAGGAAGAAAATCACATCTGCTTTTGGTTTCCCTGGAGAATTGGATATGGGGCGTAGGCTGTCTGAACCTTCTCAGCTGGAATGGATATATGACTTGTCAGCTGTGTTGATTCACAAGGGAACTGCTGTAAATAGCGGCCATTACATTGCTCATATCAAGGATGAGAATACAGGGCAGTGGTGGGAATTTGATGATGAGCATGTCTCAAACCTAGGTCGTCGCCCATTTGGAGAAGGCTTTTCAAGTTCTGCTAAAGGTGTTCATAGTGACAAAGTTTCACCATCTTGTGCAGGAGCAACGCTTGCTGATACCAGCAGAAGTATGGATGCTGTTCAGCCACAATCTTTAGAATCTAACATTCATAGTTGTAAAGAGATTTTTTCATCTACTGATGCATACAGGCTGATGTATAATCTTAGGCGTACTAGAAAGAATGATGGTAAAAGAGATCATATTGCCAACAATATTCAATTAGAAGGTCACAAGGGTTTACACAATGGCTTTCATCCTGCATCTCAACTCTTTGAGGATATAAATGATATGAATGCATCATATGCTGCTGCTTGTGAAGAGTACAAATTGAAGAAGGAAAAAGAGGTGCGTCATATCACAGAACGGAGAGAAGAGGTGCGATCAGTTCTCTCAGAAGCTCCTGTTCGATTGCATCAAGAACCATTTTATTGGGTTTCTACGGACTGGCTTCGCCAGTGGGCTGACAATGTCACTCCAGGTGTTATAGACAACAAGCCTATCCAATGCTTACATGGAAAGGTTCCAGTGTCTAAAGTTGGGTCCATGAAGCGGTTGTCTGCTAAAGCTTGGGGAATCTTGTTTTCTAAGTATGATGGAGGGCCAGCACTGACCAATAGTGACTGCTGCATGGCTTGCCTTATTGATGGTGCCAAATCTGTGGTCTTTGCTGATAGCTATAGGGATCAAAGAACATTAATGAGAGATCTTGCAAATGATGTAATTGCTGGGAAGTGCTTGGATGGAGCATATTTTGTGTCCAAGACATGGCTGCAACAGTGGGTGAGACGAAAAAATATTGATGCTCCAAGTGAAGCTGATGCAGGACCAACAGCTTCAATTATGTGCCGACATGGGCAACTAAGACCTGAGCAAGCTGGTGCCAAGCGATTGCTGGTTCCTGAGACACTTTGGCACTTTTTGTACAAGGATGCGGTTGCTGTAAAGTCTGATGATCCCTTGGGATGCACAACTTTTCCTTCAGATTCTGCACAGTGTTCTGAATGCAGTGATGAACTTTCTGAAGTTGCCTGCTTTGAGGATTCTATAAGGGAGATGAAGCTCAAACAGCGCCAAAATCATGAGAAGTTGGCTACTGGAAAGAGTATTCCCCTGTCTTTGAACTGCACGTATTACTTGATGCCTTCTTCTTGGCTCACAAAATGGAGAAACTACATAAATTCAAGTGGAAAGAATATTTCTTCATCAGTGGAACCTGAAGTTCTCGATCCTGTTATTGATGCACTGAAATGTGAATGGCATTCACGACTCCTAGAAAGGCCTCCTGACCTGGTGAACAAACGCGGTGTGCTTATACAGAAGAGTTCTACTACAGATGCTTTAACAATAATTACAGAGAATGACTGGAACAGCTTCTGTGAAGACTGGGGCGGCAACAAGGAGAAAGGCATAATGGCAACAATTGAGTCCAGTGATGTTGCAGAAAATAATTTGGGTGGGTCCCAGGAAGATGTGTTTGTATTTAAAGACCATCCAAGTTCTCAGGACGAAGCAAACAATGACCCAGAGATCAGACAGCCTTTGATTAGGACCTCTCCAGAGATTTGCGAGGATTGCATTGGTGAAAGAAAAAGTCGTGAGTTGGCGAAGAAGCTGAATTACTTCAATGAGGACATAAATGTATCTCTTGTACGTGGCAAGGAAGCTCCAAGATCAATTTTAGAAGCTTCTTCAACTACTCCTGAGACAGATCGGCGCGCCTCCAAGCGATCTCGAAAGACCAGTTATGGGACTTCAGTAAATCTAAAAGTTTCTGGTTCCACATCATTATACCAGTTAAAAATGATGATATGGGAATCACTTGGGGTGGTTAAGGAGAACCAGATACTTCACAAAGGTTCAATGATAATTGATCAGGAAAGTGCTACGCTTGCAGACTTGAGTATATTTCCTGGTGATAAGTTGTGGGTGCAAGATTCTGAAATCCACGAGCATAGAGATATTGCTGATGAGATTACTGACCAGAAAGCAAACGCACAGCATCCTGAAAAGGGGTTTCAGGGAACACTTTTGACTACAACGACTTCATCCCAAGTTGCTTAA
Protein Sequence
- >POPTR_005G179500v3
MTPPATRGKNKRNRPGDIANITSEILRKIHANGKVTDGDVNQLYMIWKPVCQGCRVNTKDNPNCFCGLIPPPNGSRKSGLWQKMSDILQALGSDPFNDLRSTDETPSGLTNLGATCYANSVLQCLYMNASFREGVFSVEPDVLNEQPVLYQLVRLFAQLHASKLAFIDPAPFITTLELDNAVQQDGHEFLTLLLSLLERCLSHSKVSKARTIVQDLFRGSVSQVTTCSNCGRDSEASSKTEDFYELQMNVKGLKSLDESLDQYLSVEQLHGENQYNCELCKSRVDATHRIRLRTLPDVLNFQLKRYEFLPKTTTRKKITSAFGFPGELDMGRRLSEPSQLEWIYDLSAVLIHKGTAVNSGHYIAHIKDENTGQWWEFDDEHVSNLGRRPFGEGFSSSAKGVHSDKVSPSCAGATLADTSRSMDAVQPQSLESNIHSCKEIFSSTDAYRLMYNLRRTRKNDGKRDHIANNIQLEGHKGLHNGFHPASQLFEDINDMNASYAAACEEYKLKKEKEVRHITERREEVRSVLSEAPVRLHQEPFYWVSTDWLRQWADNVTPGVIDNKPIQCLHGKVPVSKVGSMKRLSAKAWGILFSKYDGGPALTNSDCCMACLIDGAKSVVFADSYRDQRTLMRDLANDVIAGKCLDGAYFVSKTWLQQWVRRKNIDAPSEADAGPTASIMCRHGQLRPEQAGAKRLLVPETLWHFLYKDAVAVKSDDPLGCTTFPSDSAQCSECSDELSEVACFEDSIREMKLKQRQNHEKLATGKSIPLSLNCTYYLMPSSWLTKWRNYINSSGKNISSSVEPEVLDPVIDALKCEWHSRLLERPPDLVNKRGVLIQKSSTTDALTIITENDWNSFCEDWGGNKEKGIMATIESSDVAENNLGGSQEDVFVFKDHPSSQDEANNDPEIRQPLIRTSPEICEDCIGERKSRELAKKLNYFNEDINVSLVRGKEAPRSILEASSTTPETDRRASKRSRKTSYGTSVNLKVSGSTSLYQLKMMIWESLGVVKENQILHKGSMIIDQESATLADLSIFPGDKLWVQDSEIHEHRDIADEITDQKANAQHPEKGFQGTLLTTTTSSQVA