Information report for POPTR_002G081600v3
Gene Details
|
|
Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Actinidia chinensis: CEY00_Acc28201
- Beta vulgaris: BVRB_2g035690
- Capsicum annuum: T459_08555
- Citrullus lanatus: Cla97C08G156060
- Cucumis melo: MELO3C011203
- Glycine max: Glyma.14G132500, Glyma.04G074300, Glyma.06G075500
- Gossypium hirsutum: Gohir.A13G181900, Gohir.D13G185401
- Juglans regia: Jr11_28260
- Manihot esculenta: MANES_18G079200
- Nicotiana attenuata: A4A49_14084
- Prunus avium: Pav_sc0003562.1_g090.1.mk
- Prunus persica: PRUPE_1G462800
- Rosa chinensis: RchiOBHm_Chr6g0312261
- Vitis vinifera: VIT_04s0008g03170
Gene Resources
- Pfam: PF00443
- UniProt: A0A2K2BFC4
- EMBL: CM009291
- AlphaFoldDB: A0A2K2BFC4
- OMA: YLGQEKW
- InterPro: IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50235 , PS51283
- Gene3D: 3.30.2230.10 , 3.90.70.10
- CDD: cd01795 , cd02668
- STRING: 3694.A0A2K2BFC4
Sequences
CDS Sequence
- >POPTR_002G081600v3
ATGTCTCCACCAGCGACGCGTGGTAAAAATAAAAGGAATAGACAGGGCGACAATGTTAATATCACCTCTGAAATATTAAGGAAAATTCATGCAAGTGGTCGAGTAACTGATGGTGATGTAAATCAGCTGTACATGATATGGAAGCCAGTTTGTCAAGGCTGTCGTGTGAATACCAAGGACAACCCCAACTGCTTTTGTGGTTTGATTCCACCACCCAGTGGAAGTCGTAAATCTGGCTTATGGCAGAAAATGCCTGATATTCTTCAAGCACTTGGATCAGACCCAGTCAAAGATCTTCGTAATACGGATGAAACTCCTGCTGGTCTAACAAATCTGGGAGCAACATGCTATGCCAACAGTGTACTCCAGTGTCTGTACATGAATGCCTCATTCCGAGAAATTGTTTTCTCTGTTGAACCAGATTTGTTAAATGAACAGCCTGTGCTAAATCAGTTTGCCCGGCTTTTTGCACAGTTGCATGCTAGTAAAATGGCTGTTATTGATCCAGCTCCATTTATAATGACCTTGGAGTTAGATAATGCAGTTCAGCAGGATGGCCATGAGTTCCTGACCTTGCTTCTTTCACTGCTTGAACGCTGTCTGAACAACTCTAAAATTTCTAAGGTGAAAACAGTTGTTCAAGATCTTTTTCGAGGAAGTGTGTCTCAAGTAACAACGTGCTCAAATTGTGGAAGAGATTCTGATGCATCTTCCAAAACCGAAGACTTCTACGAGCTGGAGTTGAATGTCAAAGGCTTGAAAAGCTTAGATGAGAGTTTGGATCAGTACCTTAGTGTGGAACAGCTTCATGGAGAGAATCAATACAATTGTGAATTGTGTAAAAGCACTGTAGATGCCACTCACCGCATCAGGCTACGAACACTTCCTGATGTTCTTAATTTTCAGCTTAAGCGTTATGAGTTCCTTCCGAAGACTACTACAAGGAAGAAAATCACATCTGCATTTGGTTTCCCTGGAGAATTGGACATGGGGCTGAGACTGTCTGAACCTTCTCAGCTGGAATGGATATATGACCTGTCAGCTGTGTTGATTCACAAGGGAACTGCTGTAAATAGTGGCCATTACATTGCTCATATCAAGGATGAGAATACAGGGCAGTGGTGGGTTTTTGATGACGAGCATGTCTCAAATCTAGGTCATCGTCCATTTGGAGAAGGCTCTTCAAGTTCTACTGCTAAAGTTGTTCATAATGACACTGTTTTGCCATCTTGTGCTGGAGCAACACCCGCTGATACCAGCAGAAGTAGTGTAGATGCTGTTCTGCCACAGTCTTTAGAATCTAATGTTGGTAGTCATAAAGAGAGTTTTTCATCTATTGATGCATACAGACTGATGTATAATCTTAAGCGCACTAGAAAGAATGATGATAAAAGAAATCATATTGCAAACATTATTCAATTAGAAGGTCACAAGGGTTTACACAATGGCTTTCATCTTCCACCTCATCTCTCTGAGGATATAAAGGATGTGAATGCAGTATATCTTGCTGTTTGTGAAGAGTACAAATTGAAGAAGGAAAGAGAGGTGCATCATGTAGCAGAACGGAGGCAAGAAGTGCGATCAATTCTTTCAGAAGCTCCTGTCCGGTCGCTTGAAGAACCGTTTTATTGGGTTTCTACAGCCTGGCTTCGCCAGTGGGCGGACAACGTCATTCCAGGTGCTATAGACAACAAACCTATCCAATGCTCACATGGAGAAGTCCCAGTGTCTAAAGTTGGGTCCATGAAGCGGCTGTCTGTCAAGACTTGGGGAATCTTGTTCTCTAAGTATGATGGAGGGCCAGCACTGAGCAACAGCAACTGCTGCATGACTTGCCTTATTGATAGTGCTCAATCTGTGGTCTCTGCTGATAGCTATAGGGATCAGAGAACATTAATGAGAGATCTTGCAAACGATGTAATTACTAAGAAATGTTCAGATGGAACATATTTTGTGTCTAAGACATGGCTGCAACAGTGGGTGAGAAGAAAAAATATCGATGCTCCTAGCGAAGCCGATGCAGGACCAACTGCTTCAATTAGGTGTCGACATGGGCAACTGAGGCCTAAGCAAACTGGTGCCAAGCGATTGCTGGTTCCTGAGAAACTTTGGCTCTTTTTGTATAAGGATGCGGTTGCTGTAAAACCTGATGATCCACTGGGATGCACAACTTTTCCTTCAGATTCTGAACTCTGTCCTGAATGCAGCGATGAACTTTCTGAAGTTGCCTGCTTCGAGGATTCTATAAGGGAGATGAAGCTCAAACATCGCCAAAATCATGAAAGGTTGGCTACTGGAAAGAGTATTCCCCTGTCTTTGAACTGCACGTATTACCTGATGCCTTCTTCATGGCTCACAAAATGGAGAAACTACACGAGTGCAAGTGGCAAGAATACTTCATCAGTGGAACCTGAAGTTCTTGATCCTGTTATTGATGCACTGAAATGTGAACAGCATTCCCGACTCCTAGAAAGGCCTCCTTACCTGATGAACAAACGTGGCATGCTTATACAGAAGAGTTCTTCTACAGATGCTTTAACAATCATTACAGAGAATGACTGGAACAGTTTCTGTGAAGAGTGGGGCGGCAACAAGGAGAAAGGCATAATGGCAATAATTGAGTCCAGCGATGTCACAGAAAGTAATTTGAGTGGGTGCAGAGAAGACGTGTCACTATGTAAAGACCATCCAAGTTCTCAAGATGAAGCAAGTAATGGCCCTGAGATCAGACAGCCTGTAATTAGGACCTCTCCAGAGATTTGTGAGGATTGCATTGGTGAACGAAAAAGTCATGAGTTGGCAAAGAAGCTGAATTACTTCAATGAGGACATAAGTGTATCTCTTGTGCGTGGTAAGGAAGCTCCAAGATCGATTTTAGAAGCTTCTTCAGCCACTTCTGAGACAGATCGGCGGGCCTCCAAGCGACCTCGAAAGACCAGCTATGGGACTTCAGTAAATCTAAAAGTTTCTGGTTCCACATCATTATACCGGTTAAAAATGATGATATGGGAATCGCTTGGGGTGGTTAAGGAGAACCAGATACTTCACAAAGGTTCGGTGATTATTGATCAGGAAAGTGCTACGCTTGCAGACTTGAGTATATTTCCTGGTGACAAGCTATGGGTGCAAGATTCTGAAATCCACGAGCATAGAGATATTGCTGATGAGATTGCTGACCAGAAAGCAAATGCACAAGATCCCGAGAAAGGGTTTTGGGGAACACTTTTGACTACAACTACTGCATCCCCAGTTGTTTAA
Protein Sequence
- >POPTR_002G081600v3
MSPPATRGKNKRNRQGDNVNITSEILRKIHASGRVTDGDVNQLYMIWKPVCQGCRVNTKDNPNCFCGLIPPPSGSRKSGLWQKMPDILQALGSDPVKDLRNTDETPAGLTNLGATCYANSVLQCLYMNASFREIVFSVEPDLLNEQPVLNQFARLFAQLHASKMAVIDPAPFIMTLELDNAVQQDGHEFLTLLLSLLERCLNNSKISKVKTVVQDLFRGSVSQVTTCSNCGRDSDASSKTEDFYELELNVKGLKSLDESLDQYLSVEQLHGENQYNCELCKSTVDATHRIRLRTLPDVLNFQLKRYEFLPKTTTRKKITSAFGFPGELDMGLRLSEPSQLEWIYDLSAVLIHKGTAVNSGHYIAHIKDENTGQWWVFDDEHVSNLGHRPFGEGSSSSTAKVVHNDTVLPSCAGATPADTSRSSVDAVLPQSLESNVGSHKESFSSIDAYRLMYNLKRTRKNDDKRNHIANIIQLEGHKGLHNGFHLPPHLSEDIKDVNAVYLAVCEEYKLKKEREVHHVAERRQEVRSILSEAPVRSLEEPFYWVSTAWLRQWADNVIPGAIDNKPIQCSHGEVPVSKVGSMKRLSVKTWGILFSKYDGGPALSNSNCCMTCLIDSAQSVVSADSYRDQRTLMRDLANDVITKKCSDGTYFVSKTWLQQWVRRKNIDAPSEADAGPTASIRCRHGQLRPKQTGAKRLLVPEKLWLFLYKDAVAVKPDDPLGCTTFPSDSELCPECSDELSEVACFEDSIREMKLKHRQNHERLATGKSIPLSLNCTYYLMPSSWLTKWRNYTSASGKNTSSVEPEVLDPVIDALKCEQHSRLLERPPYLMNKRGMLIQKSSSTDALTIITENDWNSFCEEWGGNKEKGIMAIIESSDVTESNLSGCREDVSLCKDHPSSQDEASNGPEIRQPVIRTSPEICEDCIGERKSHELAKKLNYFNEDISVSLVRGKEAPRSILEASSATSETDRRASKRPRKTSYGTSVNLKVSGSTSLYRLKMMIWESLGVVKENQILHKGSVIIDQESATLADLSIFPGDKLWVQDSEIHEHRDIADEIADQKANAQDPEKGFWGTLLTTTTASPVV