Information report for POPTR_001G399600v3
Gene Details
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Functional Annotation
- Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants.
Homologous
- Actinidia chinensis: CEY00_Acc18861
- Glycine max: Glyma.12G224600, RIN1, PH13
- Gossypium hirsutum: Gohir.A11G285100
- Juglans regia: Jr02_21850, Jr09_14070, Jr02_21860
- Malus domestica: MD11G1247500
- Manihot esculenta: MANES_15G087200
- Prunus avium: Pav_sc0002828.1_g660.1.mk
- Prunus persica: PRUPE_4G180900
- Ricinus communis: 27755.t000002
- Rosa chinensis: RchiOBHm_Chr5g0033591
Gene Resources
- Pfam: PF00400
- UniProt: U5GXF3
- RefSeq: XP_006370250.1 , XP_006370251.1
- EMBL: CM009290
- AlphaFoldDB: U5GXF3
- KEGG: pop:18095578
- OMA: NSKIPLC
- InterPro: IPR000719 , IPR001680 , IPR011009 , IPR015943 , IPR019775 , IPR020472 , IPR036322 , IPR044630
- PANTHER: PTHR44218 , PTHR44218:SF1
- SUPFAM: SSF50978 , SSF56112
- PROSITE: PS00678 , PS50011 , PS50082 , PS50294
- Gene3D: 1.10.510.10 , 2.130.10.10
- OrthoDB: U5GXF3
- SMR: U5GXF3
- CDD: cd00200
- eggNOG: KOG1033
- STRING: 3694.U5GXF3
- HOGENOM: CLU_006994_1_1_1
Sequences
CDS Sequence
- >POPTR_001G399600v3
ATGCGTTTGTTCTGGCTTACATGCAGCCCAAGGGGGGTAACCATGGAGGGCTCATCTGAGTCTGCTTGGCAGAAGTCTGGTAGTTATAGGGGATTTAATACTTCAGTAGTCACCAACAGGAATCTAAGATCCGCATCTTACAACTCTGGGTTTAGAAAGGAGACTGATAGGGTTGTTCTGGCTCGTCAAAACCTAAAAAACCAGGCTGGTACTTTATCTGGGGTTTGTGAGGATGAAGCTGCAGTTGACCATTTTGTCCAAAACATGGAGTGGAACGATGTTAGCTTGAGGCATTGGTTGAACAAACCAGAACGGTCTGTTGATGAATTTGAATGTTTGCACATATTTAGGCAAATAGTCGAAATTGTAAATGTGGCACATTCACAGGGAATTGTTGTTCACAATGTCCGGCCTTCTTGCTTTGTCATGTCATCATTTAACCATGTCTCCTTCATCGAGTCCGCTTCTTACTCGGATTCTGGGTCTGATTCTTTGGATGATGGATTGAATAGACAAACTGTGGAGGTTAAAAATGCTTCTTCTTTCTCCCATGACATGTGCCAGCAGAGAAGTAGGTTACAAAGTGAAGATTTTCTACCTGCATCTACTCCAACAAATGCTTTATCGGAAGCCAGTTGCATGCAGTCCAGCTCGCTTTATGCAGCAGATTTACCATTAGGGGAAGAAACAGAAGAAAATAAAGTCCTTGGTACGAGGAACGTTGAACATGAAGAAGAAAGGAAACAACCATTTCCAATGAAGCAAATATTGCTGATGGAGTCCAGTTGGTATACCAGCCCTGAAGAGGTTGCTGGTTCACCAAGCTCTTGTGCTTCAGACATCTACCAATTGGGAGTTCTTCTTTTCGAGCTGTTCAGCCCATTCACTTCAAGGGAAGACAAGAGCAGAACTATGTCTAGTCTCAGACATCGGGTTCTTCCTCCTCAATTGCTGCTCAAGTGGCCAAAAGAAGCTTCATTTTGCTTATGGTTACTGCACCCTGAGCCAAGTAGTCGGCCAAAAATGGGAGAATTGCTGCAAAGCGAGTTTCTTAATGAACCAAGAGACTATTTGGAAGAGCGTGAAGCAGCAATACAGCTTAGAGAGAGAATAGAGGAGCAGGAATTGTTGCTGGAATTCCTTTTACCAATGCAACAAAGAAAGCAGGATGCAGCTAATAAGTTGCAAGGTACTGTTTCTCTTCTATGTTCTGATATTGAAGAAGTCACAAAGCATCAAACTTTTCTTAAGAAAAAGGGAAGCACATGTAAAGAAAGAGGAGAGGGTGATCATTTAGCATCAAATCTCCCTCCCCTGAACATTTATGATATTGACGATTCTTCTAGCTTGGGTTCCCGAAAACGATTTTGCTCAGGTCTTCAGATTCTCAACACAGAGGGATGTGATGATAATCTCAATGAAGGTCGGAACTCAGATACATTTGTAGAATCACAGGAAAGTCCTCTTTTTAGAAGTTCTCGATTGATGAAGAACTTTAAGAAATTAGAGTCAGCATATTTTTTGACAAGATCCAGACCAGTCAGGCCACCAGGGAAACCACCATTTGTTAGAAATTCACCAGTAAGTGGTGATGGGAGAGGTTCCATTGTTGTGACTGAAAGAAGCTCCATAAATAGTTTAGCACTGAAGGATCGGTTTATTAAGGGTAGACAAAGTGGATGGATAAGTCCATTCCTGGAGGGTTTGTGCAAGTATCTATCTTATAGTAAGTTAAAAGTGAAGGCTGACCTGAAGCAAGGGGATTTGTTGAACTCTTCAAACCTAGTCTGCTCTCTTAGTTTTGACCGTGATGGAGAATTTTTCGCTACAGCTGGTGTAAATAAAAAGATAAAAGTATTTGAATGTGACACAATTATAAATGAAGCTCGTGATATCCACTATCCTGTTGTTGAAATGGTAAGTAGGTCAAAGCTAAGCAGCATATGTTGGAACAGATATATTACAAGCCAAATTGCTTCAAGTAACTTTGAGGGTGTGGTGCAGGTATGGGATGTTACAAGGAGTCAAGTGGTAACAGAAATGAGAGAGCATGAGAGGCGTGTGTGGTCCATTGACTTTTCATCAGCAGATCCAACAATGCTGGCTAGTGGGAGTGATGATGGTTCAGTCAAGCTATGGAGTATCAATCAGGGAGTAAGTATTGGTTCCATCAAAACAAAAGCCAATGTCTGCTCTGTTCAGTTTCCCATGGATTCTAGTCGTTCTATTGCATTTGGTTCAGCAGATCATAGAATTTATTACTATGATCTCCGTAACTCAAAAGTTCCTCTGTGTACATTGATTGGACACAATAAAACTGTGAGTTATGTGAAGTTTGTAGATACAACCAATATTGTTTCTGCTTCCACGGATAACACACTGAAGCTCTGGGATTTGTCAATGGGCACGTCTAGGGTTATTGATAACCCCCTTCAATCCTTCACAGGCCACATGAATGTAAAGAACTTCGTGGGTTTGTCTGTATCAGATGGTTACATTGCAACTGGCTCGGAAACAAATGAGGTTTTTGTCTATCACAAGGCTTTCCCTATGCCAGTGCTGTCCTTCAAGTTTAACAACACGGACCCGCTTTCTGGCCATGAAATGGATGACGCTGCACAATTTATTTCTTCTGTCTGTTGGCGTGGCCAGTCATCTACTTTGGTTGCTGCAAATTCTACTGGGAATATCAAAATCTTGGAGATGGTTTGA
Protein Sequence
- >POPTR_001G399600v3
MRLFWLTCSPRGVTMEGSSESAWQKSGSYRGFNTSVVTNRNLRSASYNSGFRKETDRVVLARQNLKNQAGTLSGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDEFECLHIFRQIVEIVNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASYSDSGSDSLDDGLNRQTVEVKNASSFSHDMCQQRSRLQSEDFLPASTPTNALSEASCMQSSSLYAADLPLGEETEENKVLGTRNVEHEEERKQPFPMKQILLMESSWYTSPEEVAGSPSSCASDIYQLGVLLFELFSPFTSREDKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMGELLQSEFLNEPRDYLEEREAAIQLRERIEEQELLLEFLLPMQQRKQDAANKLQGTVSLLCSDIEEVTKHQTFLKKKGSTCKERGEGDHLASNLPPLNIYDIDDSSSLGSRKRFCSGLQILNTEGCDDNLNEGRNSDTFVESQESPLFRSSRLMKNFKKLESAYFLTRSRPVRPPGKPPFVRNSPVSGDGRGSIVVTERSSINSLALKDRFIKGRQSGWISPFLEGLCKYLSYSKLKVKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVSRSKLSSICWNRYITSQIASSNFEGVVQVWDVTRSQVVTEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSIGSIKTKANVCSVQFPMDSSRSIAFGSADHRIYYYDLRNSKVPLCTLIGHNKTVSYVKFVDTTNIVSASTDNTLKLWDLSMGTSRVIDNPLQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSFKFNNTDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKILEMV