Information report for PHAVU_009G169700g
Gene Details
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Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Cicer arietinum: XP_004501832.1, XP_004515844.1
- Glycine max: Glyma.04G191900.1.p, Glyma.04G191900, Glyma.06G173800.1.p, Glyma.06G173800, Glyma.04G192000.3.p, Glyma.04G192000.1.p, Glyma.04G192000, Glyma.06G174000.2.p, Glyma.06G174000.1.p, Glyma.06G174000, Glyma.04G192000.2.p
- Lotus japonicus: Lj0g3v0351959.1, Lj4g3v1389260.1
- Medicago truncatula: Medtr3g075210.1, Medtr3g075210
Gene Resources
- Pfam: PF02373 PF02375
- UniProt: V7AWK5
- RefSeq: XP_007137965.1
- EMBL: CM002296
- OMA: MRFREPS
- InterPro: IPR003347 , IPR003349 , IPR013087 , IPR036236
- PANTHER: PTHR10694 , PTHR10694:SF38
- SUPFAM: SSF51197 , SSF57667
- PROSITE: PS00028 , PS50157 , PS51183 , PS51184
- Gene3D: 2.60.120.650 , 3.30.160.60
- OrthoDB: V7AWK5
- SMR: V7AWK5
- eggNOG: KOG1246 , KOG1721
- STRING: 3885.V7AWK5
Sequences
CDS Sequence
- >PHAVU_009G169700g
GTTTTGCCGTGGCTGAAATCGATGCCGGTGGCGCCGGTGTACCGGCCGACTGCGGAGGAGTTCCAAGATCCAATCGGCTACATATTCAAGATCGAGAAGGAAGCGTCCAAGTACGGCATCTGCAAAATCATCCCTCCCTTCCCTCCTTCCCCGAAGAAAACCGCCATCGCCAATCTCAACCGCTCACTTGCCGTTTCAGGTTCCACATTCACCACGCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGCCCCCGTCCCGTGCAGCGTCCTGTATGGCAGAGCGGCGATCACTACACCTTCACAGAGTTCGAGTCCAAAGCCAAGTCCTTCGAGAAAGCGTACCTCAAACGCCACACCAGAAAGGGCTCGGGCTCGGGCCCAGGCCCGGGTCCGACCCCGCTTGAGACCGAGACGCTCTTCTGGAAGGCCACCTTGGACAAACCCTTCTCCGTGGAATACGCGAACGACATGCCGGGTTCTGCGTTCTCCCCCAAATGCCGCCATGCTGGGGATCCCACCTCCCTCGCGGACACTCCGTGGAACATGCGAGCGGTTTCGCGGGCCACGGGTTCGCTCTTGCGCTTCATGAAGGAGGAGATTCCGGGCGTTACTTCTCCCATGGTCTACGTCGCCATGCTCTTCAGCTGGTTCGCGTGGCACGTTGAGGACCACGACTTGCACAGCTTGAACTACCTCCACATGGGCGCCGGCAAGACCTGGTACGGAGTCCCCCGTGATGCTGCCGTCGCGTTTGAGGAGGTTGTTAGGGTTCACGGCTACGGTGGAGAGATTAATCCGCTGGTTACATTTGCTATTCTTGGTGAGAAAACCACGGTGATGTCGCCTGAAGTATTTATTAGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTTGTGACATTTCCAAGAGCCTATCACACAGGGTTCAGTCATGGTTTTAATTGTGGAGAGGCAGCAAACATTGCGACGCCTGAGTGGTTGAGGGTTGCTAAAGATGCTGCCATTCGGAGGGCTTCATTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCGAGCGTCAGTGCTGGACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAAGATGTGTTACAGAACAATGATCTGCTTCATATACTGGGGAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGCTCAGTTGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAATCCATCAATGTAAGCAATTCTGAGGGAATGCATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCAAGAAAAAAGTTTCTATTCTGTGAAAGACAAGTTTACTACGATGTATGAAAGGAACAGGATTTCCTCTTTTGATGTAAATGGTAACTCAAGCACTTCAAGTTCTAAGCCACTTCAAAGGGACACTGAGGGAGAAACTAGTGAAGAAGATGGATTGTCAGATCAGAGACTGTTTTCATGTGTCACTTGTGGAATATTAAGCTTTTCTTGTGTTGCTATTGTACAGCCTAGAGATCCCGCTGCTAGATATCTCATGTCAGCTGATTGCAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTATCTAACAGTAAATTTACTACTGCCCCAGAAGAAGCAACTATTCCTGTGTCAAATATGTATACAGGATGGATGAAAAAAAATGTCCAAGATGGTATGCAAGATGTTTCTGTTCAATCTTCTCGAGATGCTTTAAATATTGAAAGTGAAAAGGGCAATTCAGCTCTTGCACTATTGGCTTCAGCATATGGAAATTCTTCTGACTCTGAGGAAGATCAGATTTCAGCTGATGGTCATGAAACAAATGTGCTAAACTCTGCTTCTGAAAGTTTACTTTCTCATACTCAAGATTCCCATGCTAGTCCCATGCCTGCACTTGATAGTGCAGATAATATTCCTTCAAAGAGTGCCAGTTGTGAGGATTTAATGCATCATAGATTTGAGTGTAATTTGAGTCATCAATCTTTAGACCACTCTTTAAAGAAACAGGAGTATAATATCACATCGGGGGTAACATTTGAAAATATGAGGACGGTGCCTAATTCCACCTCCAATTGTTCCCAAGACGCCCATGATGCTGAAAGGTCATTGTCTAAAATGTCTATGGTTCCCTTTGATAATAAAAATTCTTCCATGGTGTTACAGTCTGATGAAGATTCATCCAGAATGCATGTGTTCTGTCTGGAGCATGCTGCAGAAGCTGAGAAGCAACTTCGCCCCATAGGTGGAGCCCACATATTTCTCCTATGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAAGTGGTGGCAGAAGATTTGGGGATTGATTACACATGGAAGAGTATTGCATACAGGCATGCTTCCAAGGATGATGGGGAGAGGATCCAGTCGGCTCTAGATAGCGAGGAAGCCATTCCTGGGAATGGTGACTGGGCTGTAAAACTAGGGATCAATCTCTTTTATAGCGCATATCTTAGTCGCTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATACTGTGCATTTGGTTGTAGCTCTCCATCTAGCTTACCCGAAGAGCCAAAGGTCTACCAAAGAAGGGTCAACAGGCAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAACCAGGTCCATCCCCTTTTAGCGAAAAGAGATTCTGAGGATGCCGAGGATGAGAAAATGTTACTTGGTTGGATATTACCTGATGCGAGAATTGAGAGATCAGAAAGTACCCCCAAAAGTGAAACTACTAGCAGAAAGTCAGGTAAGAAAAGGAAAATGACAGCAGAGAATGGACGAACCAGGAAAGGAAGTTATGCTAAGAAAAATGTAGTTTCATATAATTCAACTGAAGATAAACCCAACTCACAGCCAAGGAGGATTCATAGAAGTAAGAAAGCCAGGAATGTTGAGAGAGATCGTGCGGCTTTGAAAGGGGATAGTTCTCCCTATCATCATCGAAAACCTATAAGCAAACAAACAAACTGTACTGAAAGTGATGCGGTTTCTGATGATTCAGTTGATGATGAAGATGATCACATGCAGCATGGGAGGAATTTTGACATTGACAATGATGTGGTTTCAAATGATACAGGGGACTGTGATTCTGATTGGCAGCAGAGGGAAGAACATAGCAGTAAGGACGTTGAAGATATGGAGAGAGATGCAATTTCAGAGGATTCTTTAGATGTTGGTTCTCTTCAGCTGCAAAGGAAGACTTCTGAAGGCAAGCATGCCAAATGCACTAGTGAAGAAGATATAATTTCTGATGACCAAATGGAGAGTTGTTTTCAGAAGCGGCAGAGGAGAACTCCTAAAAGCAGGCAAGCCAAGTATCTGAGTGGAAAAAATATAACATCTGACGACCAGCTAGAGCTGAAAATGCAGAAGGAGCAACGGAGGAATCCTAAAAACAGGCAAGACAAATACCTCAATGAAGAGGATATTGATTCAGATGACCAACTGGAGGGCCATTATCGTAGGTATCAAAGAAGGAATCCTAAAGGCAGGCAGGCCAAATGTGTAGCAGAGGAAGATGAAATGTCAGGTGACCAATTGGAGGATCATTGTCAGAAGCTGCAAACAAGTTTCTCTAGGAAAAAGCAAATCAAAGGCATCGATAGAGAAGTTAAATATGTAATGTCTGATGATCAATTGGAGGATCATTTTCCAAAGCAGCAGAGAAGAACTCCTAAGAGCAGGCAAAACAAATACACTGATAAAGAAGTTATGGATGACTCGGCTGAAAATAATTCTCGCGTGCTGCATAGAACTCCTAAAAGAAAGCAAGATAAATCCATGGACGAAGATGATTTGAATTCTGATGATGAAATGGAAGATGATCAGCAGCTGAGAAGAACTCTTAGAAGTAAACAATCTAAACCAAAAACACTTCAACAGATGAAGCAAGCCAATTCCCTGCAAGCAAAAAGCCAGGCTTCTCGGTCCATAAAGAGGGGGTCTCGGGTGCTTGTGAAATCAAAGATTCCTCAGCAAATAAAGCCAAGGAATAAGCAATCCAGTAACTCCCGAGAGTTTAGTTTACTGATGGAAGACGAGGAAGAAGGTGGACCAAGTACCCGCCTTAGGAAGAGAACCACAAAAGCTCAGGAGAGTGAAGGAAAATTGAAAGACAAGCAAACAAAAAGGAAGAAGGTGAAGAATGCTACAACTGCAAAGGTTTCAGTTGGTCATGCCAAAGGGAAGGATGGGGATGCAGATTATCAATGTGATATTGATGGGTGCAGTATGAGCTTTGGATCAAAACAGGAGCTGCTGCATCACAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAGTATCTGGTGCAACACCGGCGAGTTCATGAGGATGAGCGACCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTCGAGTCCACACTGGTGCACGGCCTTATGTATGTGCAGAGCAAGGTTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTCGGCGAAGAAGAGTCGTCAATAG
Protein Sequence
- >PHAVU_009G169700g
CKIIPPFPPSPKKTAIANLNRSLAVSGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDHYTFTEFESKAKSFEKAYLKRHTRKGSGSGPGPGPTPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDPTSLADTPWNMRAVSRATGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPASVSAGPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGKGSAVVLLPRSSVDISVCSKLRVGSQQSINVSNSEGMHSSKGFVSDDLVFNRSHGIKQEKSFYSVKDKFTTMYERNRISSFDVNGNSSTSSSKPLQRDTEGETSEEDGLSDQRLFSCVTCGILSFSCVAIVQPRDPAARYLMSADCSFFNDWVVGSGVSNSKFTTAPEEATIPVSNMYTGWMKKNVQDGMQDVSVQSSRDALNIESEKGNSALALLASAYGNSSDSEEDQISADGHETNVLNSASESLLSHTQDSHASPMPALDSADNIPSKSASCEDLMHHRFECNLSHQSLDHSLKKQEYNITSGVTFENMRTVPNSTSNCSQDAHDAERSLSKMSMVPFDNKNSSMVLQSDEDSSRMHVFCLEHAAEAEKQLRPIGGAHIFLLCHPDYPKIEAEAKVVAEDLGIDYTWKSIAYRHASKDDGERIQSALDSEEAIPGNGDWAVKLGINLFYSAYLSRSPLYSKQMPYNSVIYCAFGCSSPSSLPEEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDAEDEKMLLGWILPDARIERSESTPKSETTSRKSGKKRKMTAENGRTRKGSYAKKNVVSYNSTEDKPNSQPRRIHRSKKARNVERDRAALKGDSSPYHHRKPISKQTNCTESDAVSDDSVDDEDDHMQHGRNFDIDNDVVSNDTGDCDSDWQQREEHSSKDVEDMERDAISEDSLDVGSLQLQRKTSEGKHAKCTSEEDIISDDQMESCFQKRQRRTPKSRQAKYLSGKNITSDDQLELKMQKEQRRNPKNRQDKYLNEEDIDSDDQLEGHYRRYQRRNPKGRQAKCVAEEDEMSGDQLEDHCQKLQTSFSRKKQIKGIDREVKYVMSDDQLEDHFPKQQRRTPKSRQNKYTDKEVMDDSAENNSRVLHRTPKRKQDKSMDEDDLNSDDEMEDDQQLRRTLRSKQSKPKTLQQMKQANSLQAKSQASRSIKRGSRVLVKSKIPQQIKPRNKQSSNSREFSLLMEDEEEGGPSTRLRKRTTKAQESEGKLKDKQTKRKKVKNATTAKVSVGHAKGKDGDADYQCDIDGCSMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEQGCGQTFRFVSDFSRHKRKTGHSAKKSRQ