Information report for PHAVU_004G051000g
Gene Details
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Functional Annotation
- Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′end鈥損rocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.
Homologous
- Beta vulgaris: BVRB_5g112490
- Citrullus lanatus: Cla97C04G071390
- Glycine max: Glyma.19G064500
- Gossypium hirsutum: Gohir.A06G170700, Gohir.D06G178500
- Juglans regia: Jr15_00770, Jr15_00760, Jr15_00750
- Medicago truncatula: Medtr6g026900
- Nicotiana attenuata: A4A49_35752
- Populus trichocarpa: POPTR_003G106200v3
- Prunus persica: PRUPE_1G353000
- Rosa chinensis: RchiOBHm_Chr7g0218051
- Solanum lycopersicum: Solyc10g050540.2
- Vitis vinifera: VIT_11s0065g00710
Gene Resources
- Pfam: PF05843
- UniProt: V7C004
- RefSeq: XP_007151490.1
- EMBL: CM002291
- AlphaFoldDB: V7C004
- OMA: CFRGPFV
- InterPro: IPR003107 , IPR008847 , IPR011990 , IPR019734 , IPR045243
- PANTHER: PTHR19980 , PTHR19980:SF0
- SUPFAM: SSF48452
- PROSITE: PS50005
- Gene3D: 1.25.40.1040
- OrthoDB: V7C004
- SMR: V7C004
- eggNOG: KOG1914
- STRING: 3885.V7C004
Sequences
CDS Sequence
- >PHAVU_004G051000g
GAGGCTCAGCATTTACCGGTTGCGGAGGCCACACCCATATACGAGCAGCTTCTGCTATTGTTTCCAACTGCTGCCAAGTTTTGGAGGCAATATGTGGAGGCACATATGGCTACTAATAATGATGATGCTACAAAACAGATATTTAGTCGGTGTTTGTTGCATTGTCTTCAGATTCCTCTATGGCGGTGCTACATTCGTTTCATTAGAAAGGTCAATGACAAGAAGGGCATGGAGGGTCAGGAAGAGACAAGAAAAGCTTTTGAGTTTATGCTTAACTGTGTTGGAGCAGACATAGCATCTGGTCCGGTGTGGATGGAGTACATAGCCTTTCTAAAATCATTGCCGGCTATAAACGGTCAAGAAGAGTCACACCGGATGACTACTGTGAGGAAAGTCTATCAGAAGGCTATTGTTACTCCTACACATCACATTGAACAACTTTGGAAGGACTATGAAAACTTTGAAAATTCTGTTAGTCGTCAGTTGGCTAAAGGACTAATATCTGAATATCAACCCAAATATAATAGTGCTAGGGCAGTTTACCGGGAGAGGAAGAAGTATGTTGATGAAATTGATTGGAATATGCTTGCTGTACCACCAAGTGGATCCTACAAGGAAGAAATGCAGTGGATTGCATGGAAGAGGCTTTTATCTTTTGAAAAAGGAAATCCACAGAGAATAGATACCGCTTCCTCCAACAAACGAATTATATTTACTTATGAGCAGTGTCTGATGTATATGTACCATTATCCTGATATATGGTATGACTATGCTACATGGCATGCAAAAGGTGGTTCCATAGATGCTGCAATCAAAGTATTTCAAAGGGCTCTGAAGGCTCTCCCTGATTCAGAAATGCTGCGATATGCTTATGCAGAGCTAGAGGAGTCTCGTGGCGCAATTCAGGCTGCAAAGAAAATATATGAAAGCCTTTTGGGAGATGGTGTCAATGCAACCACACTTGCTCATATTCAATTCATACGTTTTCTTAGAAGAACTGAAGGTGTTGAAGCTGCTAGGAAGTACTTTCTGGATGCTCGAAAATCCCCAAGCTGTACTTATCATGTTTATGTTGCTTACGCTACAATGGCATTTTGTCTTGACAAGGATCCAAAGATGGCTCATAATGTTTTTGAAGCAGGACTAAAACGCTTTATGCATGAGCCTGTTTATATTCTCGAATATGCTGATTTCTTGATACGAATGAATGATGACCAAAATATACGAGCTTTATTTGAGAGGGCATTAAGTTCACTTCCACCTGAAGAATCACTTGAGGTCTGGAAAAAGTTCACCCAGTTTGAGCAAACTTACGGGGATCTTGCTAGCATGCTGAAGGTTGAGCAAAGAAGGAAAGAAGCACTTTCTGGAGCTGAAGATGGAACATCATTAGAGAGTTCTCTGCAAGACATTGTATCACGGTACAGTTTCATGGATCTGTGGCCGTGTTCTTCTAATGATCTTGATCATTTAGCTCGGCAAGAGTGGCTTACCAAAAATATCAATAAGAGAGTGGAGAAGTGTATTTTGGCTAACGGAACGATTGTTATAGATAAGACATCTATGTCAAACATTTCAAGTACATCACCAAAGATTGTTTATCCTGATACTTCAAAGATGGTGATCTATGATCCGAAGCATACTCCTGTTACAGGTTCCGGAACAAATGCATTTGATGAAATTCTGAAAGCTACACCACCTGCTTTAGTAGCATTTTTGGCAAATCTACCAGCGGTTGAAGGTCCAACACCAAATGTGGATATTGTGCTATCAATTTGTTTGCAGAGTGATCTACCAACAGGACAAAGTGCAAAAATAGGAATTTCAACACAAGTGCAAACTGGGAAAGGAGGGATTCCATCACAGTTGCCAGCAGGTTCTGCTCCTGCTACTAGTGAACTTTCTGGTTCAAGCAAGTCGCACCCTGTTCCAAGTGGCGTGTCTTTGAAACCAGGAAGTAATAGACAATATGGGAAAAGGAAGGAATCAGAAAGGCAAGAGGATGATGATACTACTACAGTCCAAAGTCAACCACTTCCACGAGATGCTTTCCGGATACGACAGTATCAGAAAGCTCGAGCCAGCAGTGCTTCTCAAACAGGATCAGTTTCATATGGAAGTGCATTTTCTGGCGATTTATCTGGCAGCACTGGTTGA
Protein Sequence
- >PHAVU_004G051000g
DDATKQIFSRCLLHCLQIPLWRCYIRFIRKVNDKKGMEGQEETRKAFEFMLNCVGADIASGPVWMEYIAFLKSLPAINGQEESHRMTTVRKVYQKAIVTPTHHIEQLWKDYENFENSVSRQLAKGLISEYQPKYNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEMQWIAWKRLLSFEKGNPQRIDTASSNKRIIFTYEQCLMYMYHYPDIWYDYATWHAKGGSIDAAIKVFQRALKALPDSEMLRYAYAELEESRGAIQAAKKIYESLLGDGVNATTLAHIQFIRFLRRTEGVEAARKYFLDARKSPSCTYHVYVAYATMAFCLDKDPKMAHNVFEAGLKRFMHEPVYILEYADFLIRMNDDQNIRALFERALSSLPPEESLEVWKKFTQFEQTYGDLASMLKVEQRRKEALSGAEDGTSLESSLQDIVSRYSFMDLWPCSSNDLDHLARQEWLTKNINKRVEKCILANGTIVIDKTSMSNISSTSPKIVYPDTSKMVIYDPKHTPVTGSGTNAFDEILKATPPALVAFLANLPAVEGPTPNVDIVLSICLQSDLPTGQSAKIGISTQVQTGKGGIPSQLPAGSAPATSELSGSSKSHPVPSGVSLKPGSNRQYGKRKESERQEDDDTTTVQSQPLPRDAFRIRQYQKARASSASQTGSVSYGSAFSGDLSGSTG