Information report for PHAVU_003G260600g
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc24462
- Manihot esculenta: MANES_02G102500
- Medicago truncatula: Medtr8g076100
- Musa acuminata: Ma04_g22690
- Nicotiana attenuata: A4A49_31260
- Solanum lycopersicum: Solyc02g062270.3
- Solanum tuberosum: PGSC0003DMG400019934
- Triticum aestivum: TraesCS7B02G001500
- Vitis vinifera: VIT_04s0023g03150
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: V7CFI4
- RefSeq: XP_007156124.1
- EMBL: CM002290
- AlphaFoldDB: V7CFI4
- OMA: DYMGPNR
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: V7CFI4
- SMR: V7CFI4
- CDD: cd00590
- eggNOG: KOG0117
- STRING: 3885.V7CFI4
Sequences
CDS Sequence
- >PHAVU_003G260600g
CCGAGGAAATCCCCTGCGGCGAAGCGCACCGTCGCCACCAAAACCAGAAGTACAAAGAAGAAAGAGGTTTCACCCGCCCCCGATTCCAACACCGATCAACCTCCTCTGGAACAGAAACCGGTAGCTAGTGGTAGCAGTACAAAAACTGTGAAAAGGAAGGCTCCAGGGAGACCTAGACTTAAAGCAATTGATACTCCGAATTTGGAAGAACAACGTGAGGCAGTAGCTGATGAAACTCCAATTGAAGACAAAACCGAGGCTGCAGAGAAAGTGAAAGATGTTGGAGTTGTTGATGCAGATAGTATCGAGGGTGAGAAAGAGGGGGAACAAGGTGTTGGGTTTTCTGAAGAGAAGTCGATGGAAGTGGATGAACCTGTTGTTGAAAAGGGAAATGACATGATGGGAGTTGAAGTAAATGCTTCACAGGATGTTTCTGTTTCTTTTCAGCGACTAGGGCGGCCCATTATGGACCTCAATATATCTGCAGATAATGAAGATTGTACTGGTGAAAAGGAGGGTGAGAAAGGAAAGGAAGTGTTCAAAAATCAAGAAGGGGACAAAGGAAAGGATAAGTTGAAAGAACAGGAAGTAGATGAAGGGAAGGAAGAGGTGAAAGTGCATGAAGGGGACAAAGGAAAGGAAGAGTTGAAAGAACTGGAAGGAGACAACGGAATGGGAGAGTTGAAAGAAGTCGATGGAGAGAAAGAAAAGGAAGAGATGAAAGAACTCGATGGAGAGAAAGAAAAGGAAGAGTTGAAAGAACTCGATGGAGTGAAAGGTAAGGAAGAGTTGAAAGAACATGAACCAGAGAAAGGTAAGGAGGAATTGATAGAATGTGAAGGAGAGAAAGGTAAAGAAGAGATGATAGAACAAGTAGGACATAAAGGAAAGGTTGAATTGAAAGAACAGGAAGTAGACAAAGGAAAGTTGAAAGAGCAGGATCCAGAGAAAGCAGAGGAAGAGGAAACAAACCTTTTTGGACACGAAGAGAACACTGTTCCTCTTGGTCTAGAAGTGAAAGCCCAGATGCAAACAGAAGATGCTAATCCCATTAAAGATGGTGGTGAAGGACCAAAGAGTGGTGAAAAGTTAGATCTTCGAGAACAAGGGGGGAGGGTGGAGCTTTCTGAAGAGGATCCGGAGGAAGATCCAGAAGAACCTCTAGAAGAAATTGAGGCGTTGGAGCAGGAGCATAGGGAACTGGAGGCCATTGCAAATCAGCGAAAGATTAAAAAAGAGCATGAGATTTTTGTTGGTGGGTTGGATCGTGATGCTACAGAGGAAGATCTGAGAAAGGTTTTTCAGAGGATTGGGGAGATAGTTGAAGTCAGGTTGCATAAAAATTCTTCAACAAATAAAAACAAGGGCTATGCTTTTGTGAAGTTTGCTAATAAGGAGCATGCTAAGAAAGCTTTGTCTGAAATGAAGAACCCTGTTATACATGGTAAACGGTGTGGCACTGCACCTAGCGAGGATAATGACACATTATTCTTGGGAAACATTTGCAATACTTGGACAAAAGAAGCTATCAAACAGAAGCTGAAGGACTATGGTATTGAAGGGGTTGAAAACATTACGCTTGTCCCAGATGTTCAACATGAGGGCTTGAGCCGGGGCTTTGCATTTGTAGAGTTCTCTTGTCATGCAGATGCCATGCTTGCATATAAGAGGCTTCAAAAGCCTGATGTTATCTTTGGCCACGCTGAACGAACTGCCAAGGTAGCCTTTGCTGAACCCATACGTGAACCTGACCCAGAGATAATGGCACAGGTGAAGTCTGTGTTTATTAATGGTCTCCCTCCACACTGGGACGAAGATCATGTGAGGGAGTTGTTTAAATCTTATGGTGAAATTGTGAGAATCGTGTTAGCACGGAATATGTCTACTGCTAAGAGGAAGGATTATGGATTTGTTGATTTTCTTACACATGAAGCTGCTGTAGCTTGTGTTGATGGTGTAAATAAGTCAGAAATGGGTGATGTGGCATCAAAGATAAAAGTGAGAGCTAGACTCTCAAACCCTCTGCCTAAAACACAGGCTGTCAAAGGTGGTATGTGTGGTGGGTTCCGAATTGGTCATGCTAGGAGTGCAGCCTTTTCAAGACCAGGGAGGGGGTTTGGACGAGGAAGACAGCCCTTCAATAACAGGGGAAATTTCAACAGGGATAGGAGTTTCTATCACAGTGGACACAATCAAATTGGAAGAATGGGTTTTCGGGATGACTTTGATTTTAATATGCATCCGGATTTCCGTCAGAGGCAATTTGGTCCACAAGGAGCTGTGAGGGGTGGACATTATGTTGGTAGCCGAGGTGCTTCATTTGCTGGACCATCTAGACCTTATCACGATAGAGCATGGTATGGTATGCCTGATGGAGGCCCTAGTGAGCCTATTCCTCCAAGGAGGACCTACTCCCCTGGTGGACAATTTGACATGCCTTTTGTGGGAAGACATTTTGATGATCCATATCTATACGATGACAACATGCATGGAATGAAACGTCCGTTTTATATGACTGACCCTGAACCTGATTACATGGGGCCTAATAGACTTCGTCCCCGATTGGATTATGCAGATCCTCCTATATTTCATGGAACTCATCACAATGATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTATGGTTCCGATTACGGTAGAGGTTCGTATTCATCTTATTATGGGGGTGATGGCTCACATGGACATGGATACTATTATTAG
Protein Sequence
- >PHAVU_003G260600g
VASGSSTKTVKRKAPGRPRLKAIDTPNLEEQREAVADETPIEDKTEAAEKVKDVGVVDADSIEGEKEGEQGVGFSEEKSMEVDEPVVEKGNDMMGVEVNASQDVSVSFQRLGRPIMDLNISADNEDCTGEKEGEKGKEVFKNQEGDKGKDKLKEQEVDEGKEEVKVHEGDKGKEELKELEGDNGMGELKEVDGEKEKEEMKELDGEKEKEELKELDGVKGKEELKEHEPEKGKEELIECEGEKGKEEMIEQVGHKGKVELKEQEVDKGKLKEQDPEKAEEEETNLFGHEENTVPLGLEVKAQMQTEDANPIKDGGEGPKSGEKLDLREQGGRVELSEEDPEEDPEEPLEEIEALEQEHRELEAIANQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEMKNPVIHGKRCGTAPSEDNDTLFLGNICNTWTKEAIKQKLKDYGIEGVENITLVPDVQHEGLSRGFAFVEFSCHADAMLAYKRLQKPDVIFGHAERTAKVAFAEPIREPDPEIMAQVKSVFINGLPPHWDEDHVRELFKSYGEIVRIVLARNMSTAKRKDYGFVDFLTHEAAVACVDGVNKSEMGDVASKIKVRARLSNPLPKTQAVKGGMCGGFRIGHARSAAFSRPGRGFGRGRQPFNNRGNFNRDRSFYHSGHNQIGRMGFRDDFDFNMHPDFRQRQFGPQGAVRGGHYVGSRGASFAGPSRPYHDRAWYGMPDGGPSEPIPPRRTYSPGGQFDMPFVGRHFDDPYLYDDNMHGMKRPFYMTDPEPDYMGPNRLRPRLDYADPPIFHGTHHNDSFGAGSRQYPPDYYGSDYGRGSYSSYYGGDGSHGHGYYY