Information report for PHAVU_003G116400g
Gene Details
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Functional Annotation
- Involved in the promotion of the transition of the vegetative meristem to reproductive development. Four forms of the protein (alpha, beta, delta and gamma) are produced by alternative splicing. Involved in RNA-mediated chromatin silencing. At one point it was believed to act as an abscisic acid receptor but the paper describing that function was retracted.
Homologous
- Actinidia chinensis: CEY00_Acc33056, CEY00_Acc22900
- Citrullus lanatus: Cla97C06G113890
- Cucumis melo: MELO3C021258
- Gossypium hirsutum: Gohir.D10G180400, Gohir.A10G173900
- Juglans regia: Jr12_10090, Jr12_10130, Jr12_10120, Jr12_10140
- Manihot esculenta: MANES_03G206500, MANES_15G001500
- Prunus persica: PRUPE_1G114600
- Rosa chinensis: RchiOBHm_Chr4g0425821
- Vitis vinifera: VIT_05s0077g00710
Gene Resources
- Pfam: PF00076 PF00397
- UniProt: V7CAU6
- RefSeq: XP_007154401.1
- EMBL: CM002290
- AlphaFoldDB: V7CAU6
- OMA: FHPYRGP
- InterPro: IPR000504 , IPR001202 , IPR012677 , IPR035979 , IPR036020
- PANTHER: PTHR24012
- SUPFAM: SSF51045 , SSF54928
- PROSITE: PS01159 , PS50020 , PS50102
- Gene3D: 2.20.70.10 , 3.30.70.330
- OrthoDB: V7CAU6
- SMR: V7CAU6
- CDD: cd00201
- eggNOG: KOG0144
- STRING: 3885.V7CAU6
Sequences
CDS Sequence
- >PHAVU_003G116400g
CACCGCTCCTTAGACAGTCCTCCGCGTCGCTCTCCTGGCAGGGGAGGAGGATTCCGGCCGATGGGAGGGGAAGGTCCTGGTGAATTCGGATTCAACGGCCACCAGCCGCCACCGCCGCTGGTTGGCCAAAAACGAGGGTTTCCTGTCTCCGGACGCGGTGGCGGTTCGCCCGATCGTTTAGATGGTGGAAATTTTGCTAAACTTTTTGTTGGATCTGTTCCCCGAACAGCTGTTGAAGATGATATTCGCCCGCTGTTTGAAGAACATGGGAATGTGATTGAGGTTGCCCTCATCAAAGATAGAAAGACAGGACAACATCAAGGTTGTTGTTTCATAAAATATTCTACTGCAGAAGAAGCTGATCAGGCAATTAGAGCACTGCATAATCAACATACTCTTCCTGGAGGTGTTGGTCCAATACAAGTGCGATATGCTGATGGTGAACGGGAACGCCTTGGTGCAGTTGAGTACAAGTTATTTGTGGGCTCTCTGAACAAACAGGCTCCCGTAAAGGAAGTTGAGGAAATTTTCTCAAAATATGGCAGAGTTGAAGATGTTTATCTTATGCGTGATGAGAAGAAACAAAGTCGTGGATGTGGTTTTGTCAAATACTCACACAGAGATATGGCTCTGGCAGCTATTAATGCACTTGATGGTGTCTACACAATGAGAGGTTGTGAGCAACCACTAATTGTCCGGTTTGCTGATCCTAAAAGGCCTCGCCAAGGAGATTCCAGGGGTCAGGCCTTTGGAGGCCCAGGATTTGGTCCTAGATTTGATGCACCAGGCTCAAGACTTCCATCCAATATTACTGATCCTATGGGTGATCGAATGCCTCCCCCTAATGCTTGGCGACCAATGCATCCGCCAAATATGGGGCCATCCACTAATGCTGCTCTTCATGGCATGGGGCCACCAATGCTTCCAAGATCTGGTGAAATGGTGCCTACAAATGCAGGTGGTCCTATGACTGGCTTTGGAGGCCCCATGGATGGTCGTTTTCAAGTTCAGTCTATGCCATCAATGTCACAACAGAATTTCAATCAGCCTATGCCACAAATTCCACCACTCAATCAACAAATATCACCCTTACAGAAGAATATCCAATCATCCCAGGAACTGCCACCATCCAATCAGTTGTACCCTCAAGCACCAGTTCCCTACCCACAAGCATCTCTTAGACAGCATGGCCAGCCACTTCTTCCTCCTTCTGCTGGCCCTCTTCAATCTCAGCAGATACATGGAGTAAGTGGACAGTTTCCAACTTCTCAACCGCAAACTCAACAGAGTGCTTTGTCTGCTGCATTTCCTCAGACTCCTCTTGATGCCAGCATGCATTCTAATACTGCATTAGCTACAAATCAACAGCAAGTTCCTCCCTCCATGACACAGCAGCCTCTTCAGCAATCCCCTTCTCCGTTAGCTCAGATGTTATCGCAACAAACACAGACTTTGCAAGCAAGCTTTCATTCATCTCAGCAGGCCTTCTCCCAGCTTCAACAACAATTACAGATGATGCAGCCTTCTAGTCAAGCATTAACATTGCAGCAAAATGCAGAAGCTACTAAAAAGCAGTCTCAATGGGCTGGGACTGTGGCACAAACAGTGGCCAGCACTCATGCAACTGCCCCTGCTGCAGACGCCCCTTCATCCAAACTTGCTACTTCAGCCTTACAAGCAATAAACCATAACTCGGCTCATGCCAAATGTAATTGGACAGAACATATATCTCCTGAGGGCTTCAAGTACTACTATAATAGCGTTACTGGTGAAAGTCGGTGGGAGAAACCTGAGGAGTTGACGTTATATGAACAGCAACAGCAAAGGGTATCTGTTCAGCAGCCTCAAACCCAGTCACAGCCTTCAGTGCTACCTGCCCAGCAAATTCCCCAATTCCAACAGGTTCAGCCTCAAAGTCATCTCCAAGGTCAAGTTCTTCACCAGCAACAAGTGCAACAGCCTCCCTTGTCCTCTTCATTCCAGGCATATGGCGTTACAGGCCCTCAAAATGTTCAGGAAGTTGGTTATAAACAGTTGCAGCCAACTGTTATTTCAGCTGGTGATCCAGGACGTTACTCACAGGGTGTTCATTCTACACACGAATTGATGTGGAAAAATAAGCCTTCAGGAGTTTGA
Protein Sequence
- >PHAVU_003G116400g
VGQKRGFPVSGRGGGSPDRLDGGNFAKLFVGSVPRTAVEDDIRPLFEEHGNVIEVALIKDRKTGQHQGCCFIKYSTAEEADQAIRALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQAPVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALDGVYTMRGCEQPLIVRFADPKRPRQGDSRGQAFGGPGFGPRFDAPGSRLPSNITDPMGDRMPPPNAWRPMHPPNMGPSTNAALHGMGPPMLPRSGEMVPTNAGGPMTGFGGPMDGRFQVQSMPSMSQQNFNQPMPQIPPLNQQISPLQKNIQSSQELPPSNQLYPQAPVPYPQASLRQHGQPLLPPSAGPLQSQQIHGVSGQFPTSQPQTQQSALSAAFPQTPLDASMHSNTALATNQQQVPPSMTQQPLQQSPSPLAQMLSQQTQTLQASFHSSQQAFSQLQQQLQMMQPSSQALTLQQNAEATKKQSQWAGTVAQTVASTHATAPAADAPSSKLATSALQAINHNSAHAKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLYEQQQQRVSVQQPQTQSQPSVLPAQQIPQFQQVQPQSHLQGQVLHQQQVQQPPLSSSFQAYGVTGPQNVQEVGYKQLQPTVISAGDPGRYSQGVHSTHELMWKNKPSGV