Information report for PHAVU_001G114400g
Gene Details
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Functional Annotation
- Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product.
Homologous
- Cucumis sativus: CsGy4G010610
- Glycine max: Glyma.19G115100, Glyma.17G187400, Glyma.05G089300
- Gossypium hirsutum: Gohir.A11G231400, Gohir.D11G242700
- Juglans regia: Jr03_20760, Jr03_20730, Jr03_20720, Jr03_20710
- Manihot esculenta: MANES_08G154300
- Medicago truncatula: Medtr7g086370, Medtr6g027760
- Populus trichocarpa: POPTR_019G038700v3, POPTR_013G062800v3, POPTR_T069700v3
- Prunus persica: PRUPE_7G010800
Gene Resources
- Pfam: PF01612 PF00570
- UniProt: V7CV18
- RefSeq: XP_007161985.1
- EMBL: CM002288
- AlphaFoldDB: V7CV18
- OMA: NIVRHSM
- InterPro: IPR002121 , IPR002562 , IPR010997 , IPR012337 , IPR012588 , IPR036397 , IPR044876 , IPR045092 , IPR049559
- PANTHER: PTHR12124 , PTHR12124:SF72
- SUPFAM: SSF47819 , SSF53098
- PROSITE: PS50967
- Gene3D: 1.10.150.80 , 3.30.420.10
- OrthoDB: V7CV18
- SMR: V7CV18
- CDD: cd06147
- eggNOG: KOG2206
- STRING: 3885.V7CV18
Sequences
CDS Sequence
- >PHAVU_001G114400g
GAGGACTTCCATTTCTACTACAAATTCACGGAGTTCCGACGCCCGATAGAAGAAATCGCGCGGAGGACTCAATCAATGCTCAACAGAATCGGTGCGGCGGAGAATATTTGGGGCAGAGGCTCGGCATTTCCCGCTGACGTCGACGACGCGTACGAGTGGCTTGTGAACGCCAATGACGACGTTTTGGAGCTGGTTGATGAGTTGGTGGACGAGTTACGGAGGATTAAGAAGGAGGAGGGAGAGGAATTTGCAAACGAGTTGGAGAGGAAGATGAAGGTGCCGTTTCATATACCTACGATCAAGAAGCCTCAGTATGCATACAATATTGTTGTTGATAATGCAAACCAGCCTTTTGAGCATGTTTTGTTGGAGAAGAGTGAAGATGGTCAGCGGTTTATTCATCCACTGGAGAAACTCTCTGTTTTGGATTTTGTTGATAAAGAAAATATTGATGATCTTGTGCCAATAAAGCCTCCGTTACTAGAATGCACCCCTTTCAAGCTTGTGGAAGAAGTCAAAGGATTGAAGGAGTTGGCTGCTAAGCTGTCTACAGTTAATGAATTTGCGGTGGATTTGGAACATAATCATTATCGGTCTTTCCAAGGTTTGACTTGCTTGATGCAAATCTCAACCAGGACTGAAGATTTTGTTATAGACACTTTGAAGGTTCGTAATCATGTTGGGCCATACCTGAGGGCAGTCTTCAAGGACCCTACCAAGAAGAAGGTCATGCATGGAGCAGATCGAGATATTGTGTGGCTGCAACGGGATTTTGGCATTTATGTTTGTAATATGTTTGATACTGGCCAGGCTTCTAGAGTGTTAAAGTTGGAGAGATACAGTCTGCAATATCTTTTGCAACACTTCTGTGGGATTACTGCAAACAAGGAATACCAGAATGCAGATTGGAGATTACGGCCTCTTCCTGATGTGATGCTGAGATATGGCAGAGAGGATACACACTATTTGCTCTATATATATGATTTAATGAGGATCAAATTGTTTACATGGTCTAAGGAGTCTGAAGGTTGTGATAATCCTTTAGTGGAGGTTTACAAGCGCAGTTATGATGTCTGCATGCAGTTATATGAGAAGGACCTGCTGACAGAAAACTCGTACCTTCATTTATATGGGTTGAAAGGGGCTGGTTTTAATGCTCAGCAGCTTGCTGTTGTTTCAGGGCTCTGGGAATGGCGTGATGGTCTTGCTCGTGCAGACGATGAAGGGTCTGGCTATGTATTGCCAAATAAAATTATTCTTGAAATTGCCAAGCAGATGCCTGTCATTATAAGCAATTTACGGAGAATAGTAGGATGGTCAAGGCTCCCATATGTTGAGCGCAGCCTTGATGTCATTGTCAACATTGTCAGACATTCTATGCAAAATGCTGTTGCCTTTGAAGAGGCTGCACTACGTTTGAAAGAAGAACATGCAGCAAGTTTGTCAAATGTTGTACCCGTTAAGGATGGATCTGAAGTACCTCAGACGAAGGTTGGATGTGCAGCAACAGGAAGTATTGAAGTTCAAAATGACACCTGTATTGATATCTCAGGGAATTGTTTGTTTTCTGGTGACCTGGAGGAGGAATGTTTTCAGCATCAAGATAAAGATGGACAAGGAAAAGTTATATCGAATTGTCTCCCTTCAAATTTCGTAAGTGCCAGTCCCACTATTCCAGAGAAGACTCAAGATGCTGCAAACGTTATTGCACTCTCCACAGCGAAGGGCAATGGAGAGGTGCTAAAACTGCCTACTGGTGCTGTTAATGCGCCACTGCTGAGCTATTCAATTTCAGAATGGAAGCACGATCCTAATAAAAAGGTCAAGGAGGAGATCAAGCTAGAACAGATTAAACCATCGGACAATCTTCCATCCCTTTTTGTTTTGGACAACAGTGAGAAGTCAAAACTAGTTGTAGAAACTCCAAGTGTAGCATCTGAAAAATCAGACCCACAGAAGAAACCTGTTTCAGGTTCAGTTTCTACCTCCACCCTTGTGGGGATTGTAACGGTAATCTCTGATTCAGACTCGGAGGATATGCTGCAGCTAAAGAACTCCAACAACCACCCAGGGGAAAATTCTCTTGTGCCCAGGAAAAGAACATAA
Protein Sequence
- >PHAVU_001G114400g
SAFPADVDDAYEWLVNANDDVLELVDELVDELRRIKKEEGEEFANELERKMKVPFHIPTIKKPQYAYNIVVDNANQPFEHVLLEKSEDGQRFIHPLEKLSVLDFVDKENIDDLVPIKPPLLECTPFKLVEEVKGLKELAAKLSTVNEFAVDLEHNHYRSFQGLTCLMQISTRTEDFVIDTLKVRNHVGPYLRAVFKDPTKKKVMHGADRDIVWLQRDFGIYVCNMFDTGQASRVLKLERYSLQYLLQHFCGITANKEYQNADWRLRPLPDVMLRYGREDTHYLLYIYDLMRIKLFTWSKESEGCDNPLVEVYKRSYDVCMQLYEKDLLTENSYLHLYGLKGAGFNAQQLAVVSGLWEWRDGLARADDEGSGYVLPNKIILEIAKQMPVIISNLRRIVGWSRLPYVERSLDVIVNIVRHSMQNAVAFEEAALRLKEEHAASLSNVVPVKDGSEVPQTKVGCAATGSIEVQNDTCIDISGNCLFSGDLEEECFQHQDKDGQGKVISNCLPSNFVSASPTIPEKTQDAANVIALSTAKGNGEVLKLPTGAVNAPLLSYSISEWKHDPNKKVKEEIKLEQIKPSDNLPSLFVLDNSEKSKLVVETPSVASEKSDPQKKPVSGSVSTSTLVGIVTVISDSDSEDMLQLKNSNNHPGENSLVPRKRT