Gene Details:

  • Gene ID: PGSC0003DMG400032817
  • Suggest Gene Name: SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5
  • Description: putative flowering gene
  • Species: Solanum tuberosum
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3’UTR.

Homologous

Sequences:

CDS Sequence
  • >PGSC0003DMG400032817
    ATGGAAACAGCTAATAATAATCAGCTAAAATCCATGGAGAAAAATGATGACTTTTTAGTAATTTCCACTAGTGAAAATGCTAAGAAAAAAATCATTACAACAAATAATAATAACAACAAGAAATTATCATCATCATCAAATTCTTCTTCTTCTTCTTCTTCACTAATAAGAAGTTGTCAAGCTGAGAAATGTAATGTTGATTTAAGTGATGCTAAGCAATACCATAAGAGGCATAAAGTCTGTGAATATCATGCTAAAGCTCAAGTCGTCGTCGTCGCTGGACTCCGCCAACGTTTCTGTCAACAATGCAGCCGATTTCATGAGCTAACGGAATTTGATGAATCGAAAAGGAGTTGCCGGAGACGTTTGGCTGGACACAACGAAAGGCGAAGAAAGAGTACATCGTCGTCATCGTCTTCATCATCTACAGATCAGTCTCATAGAATTCATATATCTATCCAAGAAAATTCAACTCACAAAAACATCCATCTACGTTGA
Protein Sequence
  • >PGSC0003DMG400032817
    METANNNQLKSMEKNDDFLVISTSENAKKKIITTNNNNNKKLSSSSNSSSSSSSLIRSCQAEKCNVDLSDAKQYHKRHKVCEYHAKAQVVVVAGLRQRFCQQCSRFHELTEFDESKRSCRRRLAGHNERRRKSTSSSSSSSSTDQSHRIHISIQENSTHKNIHLR