Information report for PGSC0003DMG400025001
Gene Details
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Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc06634, CEY00_Acc21486
- Capsicum annuum: T459_33275, T459_33913
- Nicotiana attenuata: A4A49_35242, A4A49_40161
- Prunus avium: Pav_sc0001938.1_g060.1.mk
- Prunus persica: PRUPE_6G306600
- Sesamum indicum: SIN_1022787
- Solanum lycopersicum: Solyc10g006770.3, Solyc01g101030.3
- Vitis vinifera: VIT_14s0060g00580
Gene Resources
- Pfam: PF14826 PF00557 PF08512 PF08644
- UniProt: M1CC77
- RefSeq: XP_006362928.1 , XP_006362929.1
- AlphaFoldDB: M1CC77
- KEGG: sot:102588201
- OMA: DWCLSAR
- InterPro: IPR000994 , IPR011993 , IPR013719 , IPR013953 , IPR029148 , IPR029149 , IPR033825 , IPR036005 , IPR040258 , IPR048969
- PANTHER: PTHR13980 , PTHR13980:SF24
- SUPFAM: SSF55920
- Gene3D: 2.30.29.150 , 2.30.29.210 , 2.30.29.30 , 3.40.350.10 , 3.90.230.10
- OrthoDB: M1CC77
- SMR: M1CC77
- CDD: cd01091
- eggNOG: KOG1189
- STRING: 4113.M1CC77
- HOGENOM: CLU_004627_1_0_1
Sequences
CDS Sequence
- >PGSC0003DMG400025001
ATGGTGCAAGAGAGAGCTGGAAATGGAGCACTTTCAAATGGGAATTCGGCAGGTGGAAATGCTTATACAATTGACTTGAATACTTTCAGTAAGCGACTGAAGGCCTTATATTCACACTGGCACAAACACAAGGATGACCTTTGGGCCTCTTCTGATGTCCTTGCTATAGCTACGCCGCCACCTTCGGAGGACTTGAGATACTTGAAATCCTCAGCTTTAAATATTTGGTTGCTAGGGTATGAGTTTCCTGAGACGATTATGGTTTTCGGAGACAAGCAAATACATTTTCTGTGTAGCCAGAAGAAAGCCTCATTGCTTAGTGTTGTAAAATCTGCTGCTAAAGAGGCTGTGGATGTGGACGTTATCCTGCATGTGAAGGCGAAAAATGAGGATGGGACTACTCAAATGGACAATGTGCTTCACACTATCCGTATGCAGCCAAAGTCAGATGGTCCTGATACCACAGTCGTCATTGGATATATTGCAAGAGAGGCCCCTGAAGGAAAACTCTTGGAGATATGGACCGATAAGATGAGAAATTCAAGCCTTACTCTTAGTGATATCTCAAATGGGCTGGCTGACCTCTTTGCTGTGAAGGAACAGAATGAGATAATAAATGTGAAGAAAGCTGCATATTTGACTGCTTCTGCAATGAAGAACTTTGTTGTTCCGAAGCTTGAGAAAGTTATTGACGAGGAGAAGAAAGTAACTCATTCTTTATTAATGGATGACACAGAAAAGGCTATTCTAGAACCTGCAAAAATTAAGGTGAAGCTGAAAGCTGAGAATGTTGATATATGTTACCCCCCAATCTTCCAGAGTGGTGGGAATTTCGATCTTAGACCTAGTGCTACAAGCAATGATGAACAGTTGTACTATGATTCTGCCAGTGTCATCATATGTGCAGTTGGATCACGATACAACAGTTACTGTTCAAATGTTGCCAGAACATTTCTCATTGATTCAACTTCGACGCAGAACAAGGCTTATGAGGTTCTTCTTAAAGCTCACGAGGCAGCAATTGGTGCATTGAAGCCTGGAAACAAGCTTAGTTCCGTGTATCAAACAGCTCTTGAAGTGGTTGAGAGGGATGCTCCTGAATTTGTTAGCAACCTGACAAAGTCTGCTGGGACTGGGATTGGTCTTGAGTTCCGGGAGTCTGGGTTGATCATTAATGCTAAGAATGATAAGGTGCTGAGAGCGGGAATGGTTTTCAACGTGTCACTTGGTTTCCACAATTTGCAAACTGGGACCACCACTGAAAAGAGTAAGAATTTTTCACTTTTGTTAGCAGATACGGTTATCGTCACAAATGATGGCCATGATGTGGTTACTCATTTGAGCTCTAAAGCCGTGAAGGATGTAGCCTATTCTTTCAATGAAGATGAGGAAGATGAGGAGGAGGTTAAGGTGAAAGCTGATTCAAGCAGGATGGAAGCCTTGTATTCCAAGGCAACACTTAGGTCAAACAACCAAGAAGAGCTCCGGAGGCAGCATCAAGCAGAACTTGCTCGTCAGAAGAATGAAGAAACTGCTCGTCGTCTTGCTGGTGGAGGAGCTTTAACGGGGAATAACAGGGGTGCTGCTAGGGCCTCAAGTGACCTTGTTGCGTATAAGAGCATCAATGATCTACCACCTCCTAGGGATATGACTATTCAGGTTGACCAAAAGAATGAAGCCATTCTTCTACCAATATATGGTACTATGGTTCCTTTCCATGTGGCTACTGTTAAGACTGTTTCAAGCCAGCAGGATACCAACCGTAACTGTTATATCCGTGTCATTTTCAATGTCCCTGGCACCCCTTTTACACCTGTTGATGCAAATGCTCTTAAGAATCAGGGTGCTATTTACCTGAAGGAAGCTTCATTTCGTTCCAAGGATCCAAGGCACATAAGTGAAGTGGTTCAGCAGATTAAAACTCTTAGACGGAATGTTATGGCCAGGGAGTCTGAGAGAGCTGAAAGGGCAACTTTGGTGACTCAGGAAAAACTTGTACTTGCAGGGAATAAATTCAAACCAGTTAGGCTGTCTGACTTATCTATTCGTCCCTCTTTTGGTGGTCGTGCAAGAAAGCTTCCGGGTACATTGGAAGCTCATGTTAATGGTTTCCGGTACTCGACCTCAAGAACAGATGAGCGTGTTGACATCATGTTTGGCAACATCAAGCATGCATTCTTCCAGCCAGCAGAGAAGGAGATGATTACCCTTCTTCACTTTCATCTGCATAACCACATAATGGTAGGAAACAAGAAAACCAAGGATGTGCAATTCTATGTTGAGGTAATGGATGTGGTGCAAACACTTGGAGGTGGAAAGCGGTCTGCCTATGACCCAGATGAGATTGAGGAAGAACAGAGAGAAAGAGACCGTAAGAACAAATTCAACATGGACTTCCAGAATTTTGTGAACCGGGTGAATGATATGTGGAGCCAGCCCCAGCTTAAAGGACTCGACCTGGAGTTTGATCAACCTCTGAGAGAACTTGGGTTCCATGGGGTGCCCTATAAATCATCAGCATTCATCGTGCCAACCTCGAGCTGTTTGGTTGAGCTGATAGAGACCCCATTTCTCGTGATAACCTTAAGTGATATTGAGATTGTCAACTTGGAGAGAGTTGGATTTGGGCAGAAGAATTTTGATATGGCAATTGTCTTCAAGGACTTCAAGCGTGATGTCATGCGCATAGATTCCATCCCTGTCTCCGCACTTGATGGCATCAAGGAGTGGCTTGACACAACTGACATCAAGTATTATGAGAGCAAGATGAATCTGAATTGGCGTGAAGTATTGAAGACCATAACTGAAGATCCCCAAAGGTTTATAGATGAAGGTGGTTGGGAATTTTTAAACATAGATGCTTCTGACTCAGAATCTGAAAACTCAGAGGAGTCAGACCAAGGTTATGAACCCTCAGACGCTGAACCTGAGTCAGATTCAGAAGACGAGGCCTCTGATAGTGAATCTCTGGTGGATTCCGAGGAAGAAGGGGAAGACTCAGATGAAGACTCGGAGGAAGAAAAAGGCAAAACATGGGAAGAGTTGGAGAAGGAGGCAAGCAATGCAGATAGGGAGAAAGGAGATGAACCTGACAGCGAGGATGAGAGGAGGAGAAAGAAGAACTTTGGCAAGTCACGATCTGGTCCAAGTTCTGCTGGTTCTAAGCGAATGAAGTTTAGGTAG
Protein Sequence
- >PGSC0003DMG400025001
MVQERAGNGALSNGNSAGGNAYTIDLNTFSKRLKALYSHWHKHKDDLWASSDVLAIATPPPSEDLRYLKSSALNIWLLGYEFPETIMVFGDKQIHFLCSQKKASLLSVVKSAAKEAVDVDVILHVKAKNEDGTTQMDNVLHTIRMQPKSDGPDTTVVIGYIAREAPEGKLLEIWTDKMRNSSLTLSDISNGLADLFAVKEQNEIINVKKAAYLTASAMKNFVVPKLEKVIDEEKKVTHSLLMDDTEKAILEPAKIKVKLKAENVDICYPPIFQSGGNFDLRPSATSNDEQLYYDSASVIICAVGSRYNSYCSNVARTFLIDSTSTQNKAYEVLLKAHEAAIGALKPGNKLSSVYQTALEVVERDAPEFVSNLTKSAGTGIGLEFRESGLIINAKNDKVLRAGMVFNVSLGFHNLQTGTTTEKSKNFSLLLADTVIVTNDGHDVVTHLSSKAVKDVAYSFNEDEEDEEEVKVKADSSRMEALYSKATLRSNNQEELRRQHQAELARQKNEETARRLAGGGALTGNNRGAARASSDLVAYKSINDLPPPRDMTIQVDQKNEAILLPIYGTMVPFHVATVKTVSSQQDTNRNCYIRVIFNVPGTPFTPVDANALKNQGAIYLKEASFRSKDPRHISEVVQQIKTLRRNVMARESERAERATLVTQEKLVLAGNKFKPVRLSDLSIRPSFGGRARKLPGTLEAHVNGFRYSTSRTDERVDIMFGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKFNMDFQNFVNRVNDMWSQPQLKGLDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLVELIETPFLVITLSDIEIVNLERVGFGQKNFDMAIVFKDFKRDVMRIDSIPVSALDGIKEWLDTTDIKYYESKMNLNWREVLKTITEDPQRFIDEGGWEFLNIDASDSESENSEESDQGYEPSDAEPESDSEDEASDSESLVDSEEEGEDSDEDSEEEKGKTWEELEKEASNADREKGDEPDSEDERRRKKNFGKSRSGPSSAGSKRMKFR