Information report for PGSC0003DMG400019934
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Arabidopsis thaliana — AT2G44710
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: M1BRK9
- RefSeq: XP_006366568.1
- AlphaFoldDB: M1BRK9
- KEGG: sot:102579421
- OMA: DSKEYPM
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: M1BRK9
- SMR: M1BRK9
- CDD: cd00590
- eggNOG: KOG0117 , KOG1808
- STRING: 4113.M1BRK9
- HOGENOM: CLU_282481_0_0_1
Sequences
CDS Sequence
- >PGSC0003DMG400019934
ATGAGAACTCGAAGCGCCGAAAAGAGGTCTGCCGGAATAAATCAAACCCCGCCGGCCGAGCCGAAGCGTACGCCGCCATCTAGGGCTAAGCAAACTAGGAACGTTGGATCCAAAAGCTCACCTGCCGCTGAAGAAGCAAAGGCTTCAGATGCAGATGGAGCTGTTCAATCAACACCAGTAGCAAAATCCGCTTCAGGTAGGAAAACTACTCGAAGGGCTGTGAAGAAGGTGGTAAAGAAAAGTCCTGCTTCTTCTAAAACTACCTCGGATAAAACACTTATATCAGAAGATGCTGGAACGGCAATGCTCGAAGATCCTGTTGAAGAGAAGGATGCGAAGGACTCAAAGGAAGATCATGGCAATGAGAAAGATGCAGCCGGATCAACAGAATGTGTCGAGGAGGGAGATACAGAGGACCCGAAGGAAGATCATGTGAAGGAGGAAGATGCACAGGAATCTATCAAGGAGGGAGATACAGAGGACACAGAGGAAGTTGATGTCAAGGAGGAAGATGCAGAGGACCCAAAGGAAGATCCTGTCAAGGAGAAAGATCTACAGGATCCCAAGGAAGACGCTGCGAAGGAGAAAGGTGCAGAGGACCTTAAGGAAGATATTGTCAAGGAGAAAGTTGTGGAGGAATCAGAAGAAAATGGTATAAAGGAGAAAGATGCAGAGGAGTCAAAGGAAGATCTTGTCATGGGGGAAGCTGCAGAGGACTCAAAGGAATATCATGTGAAGGAGAAAGATGCAGAGGACTTAAAGGAAGATATTGGTGAGGAGGAAGATGCAGAGAACTCAAAAGAAAATGCTATAAAGGAGAAAGATGCTGAGTCAAAGGAAGATCTTGTCATGGGGGAAGCTGCAGAGGACTCAAAGGAATATCCTATGGAGGAGGAAGATGCAGAGGGTTCAAAGGAAGATGTTGCGAAGGAAAAAGATGGAGAGGAGTTGAAGGAAGATCTTGTCAGGGAAGCAGATGCAGAGGACTCGAAGGAATATTTTGTGAAGGAGAAAAATGCAGAGGACTCAAAGGAAAGTGCTGTCATGGAGGAAGATGCAGAGGACTCAAAGGAAGATCCTGCAAAGGAGGACGATGAGTACTTGAAGGAAAATCCTGTCATGGGGGAAGATGCAGAGGATTCAAAGGAAGATCCTGTTAAGGAGAAGGATGCAGAGGGCTTAAATGATGCAGGACCAACACCCATGTATGAGCCAAATAAAGAAATTGAAGAATCTTCAAATAATTTAGTGTCCACAGTTAAAGATGTTGGTGATTCCGTGGCGGAAGATCAAAATGGAAACAAGGAGGAACATGCAGGTGATGCACAGGGGGAACCAGCTCTAAATACTTTAATGTCTCTAGATGAAGTAACTGTTGTCTATGATGTGAGATTGTCAGAAAAAATTGGCCATGATGTGAGAACTTCAGAAAATCAGGGACCTGCTGTTACATATGTCAAATCTCAGGAGCCTATTATTGAGGATATGAAATCTTCAAACAGTCAGGAACTTATTACTACAGAACTGAAATCTCAGGAGGGCGAAGGATCTAATAAAGGAAAAGAAGGACTGGAGTTGAGGGGAGAAAATGACGATGGTTCAACTCCTACAGGGGATAATGTAAATGCACAGTGTGCAGAAGATAGAATGGAGGAAGATACAGATAGGAAGATGAAAGGAAAGGATATTTCTCTTGACGAAGCTGGTGAAGATAAAATAGAGGCTTTTGCTGATCAAGAAAATAGTGAAGAATTTGTGGAAGATGATGTGCCTGAGCACTGTGAAGAAGCCGAGACGTTGGAAGATGAGCGTGCTCAATTGAATGCTCTTGCAAAGGAACGAAAGAAGAGGAGGGAGCTGGAAGTATTTGTTGGTGGGTTAGACCGTGATGCTGTGGAGGAGGATCTGAAAAGGGTGTTCCAGCATGTGGGGGAGGTTATTGATGTTCGAATGCACAGAGAGCTGTCAACAAACAAGAATAAGGGATATGCCTTCGTGAAGTTTGCAACTAAGGAGCAAGTTAGCCGTGCTTTGGCTGAAATGAGAAATCCAGTTATACGGGGAAAGCGATGTGGAACTTCTCCAAGTGAGGACAATGACACCTTATTCTTAGGAAATATTTGCAACACATGGACAAAGGAAGCCGTGAGACAAAAGCTGAAAGATTATGGTGTAGAAAGTGTTGAAAACATTAATTTGGTGGCTGATCCGAAACGTGAAGGTTTGAGTCGTGGTTTCGCGTTTCTCGAGTTCTCTTGTCACACTGATGCCATGACGGCATACAAAAGACTTCAAAGGCCTGATGTTGTTTTTGGTCACTCTGAGAGGACTGCCAAAATAGCTTTTGCCGAACCTTTACGCGATCCAGATCCAGAGGTAATGGCTCAAGTGAAGTCAGTATTTATTGATGGACTCCCTCCTTATTGGAATGAAGAACGCGTCCGTGAGAAATTCAAATGTTTTGGGGAGATCACAAGAATTACGCTAGCCAGGAATATATCAACAGCAAAGCGGAAGGATTTTGGATTTGTTGATTTCGACACACATGAAGCTGCTGTTTCTTGCGTTGAGGGCGTTAATAACACAGAGCTGGGTGATGGAAATTTGAAGGCAAAAGTGCGAGCCAGGCTTTCAAATCCCCAACCAAAAACTCAGGCTGTGAAAGGTGGAATATCTGGAGGGTTCCGAATTAGCCGTGGTCCCATGGGAAGGGGCCTTCCGCGAGGAGGACATACTCTTGGTAGAGCTAATTTTCCGCGTGGTAGGGGCTTTCACCCTCGTGGACCTGGTCATGGTGGTAGAATGGGCTTCACTGAACATGAGTTTGGTAGCCCTTATCCTCCTTTCCGTGGACGGTCAAACTTTGGACGAGCAGGTGGGAGGTGGAATTTCAGTGGTGCTCATCCAGTAACTAGTGAGGGTCCAATGTTTGTTGATAGAATGAGGCATGGAGATAGAGGTCACGCAGATGATGCCTTCTTTAGGAGACAACAATTTCCTATTGAAGGAAATAACCGGCCATCCATGGATAGGCACATTGAGGACCGTTTCGGTTATGATAATACTGACCATGGGTTAAAGAGGCCCTTTTCCATGACAGTCCCGAATCCGGATTACTTGGGGCCTAGCAGACGTCCTCGGTTTGATCATCCAGATTCTGCAAGTTCTCTTCAAGGGGATCGTTATAGAAATAATGTTCCTCCAGGTGGTGATCAATACTCACGTGGTTATTATGGCTCTGATTATGGGAGAGGCCAACATCCATCTTTTTATGGAGGTGGTCATCCACATGGGCGTGGATATGGTCGTGGTTATTATTAG
Protein Sequence
- >PGSC0003DMG400019934
MRTRSAEKRSAGINQTPPAEPKRTPPSRAKQTRNVGSKSSPAAEEAKASDADGAVQSTPVAKSASGRKTTRRAVKKVVKKSPASSKTTSDKTLISEDAGTAMLEDPVEEKDAKDSKEDHGNEKDAAGSTECVEEGDTEDPKEDHVKEEDAQESIKEGDTEDTEEVDVKEEDAEDPKEDPVKEKDLQDPKEDAAKEKGAEDLKEDIVKEKVVEESEENGIKEKDAEESKEDLVMGEAAEDSKEYHVKEKDAEDLKEDIGEEEDAENSKENAIKEKDAESKEDLVMGEAAEDSKEYPMEEEDAEGSKEDVAKEKDGEELKEDLVREADAEDSKEYFVKEKNAEDSKESAVMEEDAEDSKEDPAKEDDEYLKENPVMGEDAEDSKEDPVKEKDAEGLNDAGPTPMYEPNKEIEESSNNLVSTVKDVGDSVAEDQNGNKEEHAGDAQGEPALNTLMSLDEVTVVYDVRLSEKIGHDVRTSENQGPAVTYVKSQEPIIEDMKSSNSQELITTELKSQEGEGSNKGKEGLELRGENDDGSTPTGDNVNAQCAEDRMEEDTDRKMKGKDISLDEAGEDKIEAFADQENSEEFVEDDVPEHCEEAETLEDERAQLNALAKERKKRRELEVFVGGLDRDAVEEDLKRVFQHVGEVIDVRMHRELSTNKNKGYAFVKFATKEQVSRALAEMRNPVIRGKRCGTSPSEDNDTLFLGNICNTWTKEAVRQKLKDYGVESVENINLVADPKREGLSRGFAFLEFSCHTDAMTAYKRLQRPDVVFGHSERTAKIAFAEPLRDPDPEVMAQVKSVFIDGLPPYWNEERVREKFKCFGEITRITLARNISTAKRKDFGFVDFDTHEAAVSCVEGVNNTELGDGNLKAKVRARLSNPQPKTQAVKGGISGGFRISRGPMGRGLPRGGHTLGRANFPRGRGFHPRGPGHGGRMGFTEHEFGSPYPPFRGRSNFGRAGGRWNFSGAHPVTSEGPMFVDRMRHGDRGHADDAFFRRQQFPIEGNNRPSMDRHIEDRFGYDNTDHGLKRPFSMTVPNPDYLGPSRRPRFDHPDSASSLQGDRYRNNVPPGGDQYSRGYYGSDYGRGQHPSFYGGGHPHGRGYGRGYY