Information report for PGSC0003DMG400015766
Gene Details
|
|
Functional Annotation
- Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.;Phytochrome A gene 2;Encodes photoreceptor phytochrome A
Homologous
- Arabidopsis thaliana — AT1G09570
- Glycine max — Glyma.20G090000
- Oryza sativa — LOC_Os03g51030
Gene Resources
- Pfam: PF01590 PF02518 PF00989 PF08446 PF00360 PF00512
- UniProt: M1BAD9
- RefSeq: XP_006339917.1
- AlphaFoldDB: M1BAD9
- OMA: YLHHIQR
- InterPro: IPR000014 , IPR000700 , IPR001294 , IPR003018 , IPR003594 , IPR003661 , IPR005467 , IPR012129 , IPR013515 , IPR013516 , IPR013654 , IPR013767 , IPR016132 , IPR029016 , IPR035965 , IPR036890 , IPR043150
- PANTHER: PTHR47876 , PTHR47876:SF3
- SUPFAM: SSF55781 , SSF55785 , SSF55874
- PROSITE: PS00245 , PS50046 , PS50109 , PS50112 , PS50113
- Gene3D: 1.10.287.130 , 3.30.450.20 , 3.30.450.270 , 3.30.450.40 , 3.30.565.10
- OrthoDB: M1BAD9
- SMR: M1BAD9
- CDD: cd00082 , cd00130
- STRING: 4113.M1BAD9
- HOGENOM: CLU_010418_0_0_1
Sequences
CDS Sequence
- >PGSC0003DMG400015766
ATGTCGTCTTCAAGACCTAGCCAATCTTCCACCACTTCATCAAGATCAAAGCACAGTGCTAGGATCATTGCACAGACCTCTATTGATGCAAAGTTGCATGCAGACTTTGAGGAGTCAGGTGATTCCTTTGACTATTCAAGCTCGGTGAGGGTTACAAATGTAGCTGAGGGTGAGCAAAGGCCAAAGTCAGACAAAGTTACCACCGCTTACCTTCATCAGATCCAAAAGGGCAAGTTTATCCAGCCATTTGGTTGTCTGTTAGCCCTGGATGAGAAAACATTAAAGGTCATAGCATTCAGTGAAAATGCCCCTGAAATGCTGACCATGGTTAGCCATGCTGTTCCAAGTGTTGGTGAGCATCCAGTTCTTGGCATCGGGACTGATATCAGAACGATCTTCACTGGTCCTAGTGGCGCAGCATTGCAGAAAGCCTTGGGGTTTGGGGAGGTTTCTCTGTTAAATCCTGTCCTTGTTCACTGCAAAAATTCTGGGAAGCCATTTTATGCAATTGTTCATAGGGTTACAGGTAGCTTAATCATTGATTTTGAGCCTGTGAAGCCCTATGAAGTTCCCATGACTGCTGCAGGGGCCCTGCAGTCATATAAACTTGCAGCCAAAGCCATTACTCGCTTGCAGTCCTTGCCCAGTGGCAGTATGGAAAGACTTTGTGACACAATGGTTCAGGAGGTTTTTGAACTCACAGGTTATGACAGGGTGATGGGATATAAGTTTCACGATGATGATCATGGAGAGGTGGTGTCTGAGATCACAAAGCCTGGCCTCGAGCCTTACCTTGGTTTACATTATCCTGCTACGGATATTCCACAGGCTGCACGGTTTTTGTTTATGAAGAATAAGGTCCGAATGATTTGTGATTGCCGAGCAAAACATGTGAAGGTAGTCCAAGATGAGAAGCTTCCATTTGACTTAACATTGTGCGGCTCTACTCTTAGGGCCCCTCACTACTGCCATTTACAGTATATGGAGAACATGAATTCAATTGCATCACTTGTAATGGCAGTTGTGGTCAATGACGGGGATGAAGAAGGAGAAAGCTCTGATTCTTCACAATCTCAAAAAAGAAAAAGGCTATGGGGCCTGGTTGTTTGCCACAACACGACCCCAAGGTTCGTCCCCTTTCCACTGAGGTATGCATGTGAGTTTCTTGCACAAGTCTTTGCCATACACGTTAACAAGGAACTGGAATTGGAAAATCAATTCCTTGAGAAAAATATTCTGCGTACTCAGACTCTCTTGTGTGATATGCTGATGCGAGATGCTCCCCTAGGTATCGTGTCACAGAGCCCCAACATTATGGATCTCATCAAATGTGATGGTGCTGCTTTGCTCTATAAGAATAAGATACATCGATTAGGAATGAACCCAAGTGACTTTCAGCTGCATGATATAGTATCATGGCTTTGTGAGTATCATACAGATTCCACAGGCTTGAGTACGGATAGCTTGTATGATGCTGGGTTTCCTGGGGCTCTTGCTCTTGGTGATGCAGTCTGTGGTATGGCGGCTGTAAGAATATCTGATAAGGACTGGCTGTTCTGGTACAGGTCACACACTGCTGCTGAAGTTAGATGGGGTGGTGCAAAGCATGAACCTGGTGAGAAGGATGATGGCAGGAAAATGCATCCTAGGTCATCATTCAAAGCATTCCTGGAAGTTGTCAAGACAAGGAGTATACCCTGGAAGGACTATGAGATGGATGCAATCCACTCCTTGCAGCTCATACTAAGAAATGCTTTCAAGGATGCTGATGCTGTGAATTCAAATACAATTTCCATCCATACGAAGCTTAATGATCTAAAGATTGATGGAATGCAGGAACTTGAAGCAGTGACAGCTGAAATGGTCCGCTTAATTGAAACAGCTTCAGTTCCTATATTCGCAGTTGATGTTGATGGGCAGGTTAATGGATGGAACACTAAAGTTGCTGAATTAACTGGTCTTCCTGTTGATGAAGCAATTGGGAAACATCTGCTCACTCTCGTGGAGGATTCATCAGTTGATACCGTGAATAAGATGTTGGAATTAGCATTGCAGGGGAAAGAGGAAAGAAATGTAGAGTTTGAAATAAAAACACATGGGCCGTCGAGGGATTCTAGTCCAATCAGCTTAATCGTGAATGCATGTGCAAGCAAAGATGTTCGGGATAGTGTTGTGGGTGTGTGTTTTATTGCTCAGGATATAACTGGACAAAAAAGTATCATGGACAAGTTCACCCGAATCGAAGGTGACTATAGAGCGATTATCCAAAATCCTCACCCATTGATCCCACCAATATTTGGCACTGATCAATTTGGCTGGTGTTCTGAATGGAACTCTGCGATGACCAAGTTAACTGGATGGCGGCGTGATGATGTTATGGATAAAATGCTGCTAGGGGAGGTTTTTGGGACACAGGCAGCTTGCTGCCGTCTCAAGAATCAAGAAGCTTTTGTGAATTTCGGAGTTATACTAAACAATGCTATCACTGGTCAAGAATCTGAGAAGATTCCTTTTGGTTTCTTTGCACGTTACGGGAAATATGTGGAGTGCTTACTCTGTGTGAGCAAAAGGTTAGATAAAGAGGGTGCAGTCACGGGACTCTTTTGTTTCCTGCAGCTTGCAAGCCATGAGTTGCAACAAGCTCTTCATGTTCAACGATTATCAGAACAAACTGCATTGAAAAGGTTGAAAGTATTAGCTTACATAAGGAGGCAAATTAGGAATCCTCTTTCTGGGATTATATTCTCTCGGAAGATGCTAGAGGGGACTAGCTTGGGCGAAGAGCAGAAAAATATACTGCATACAAGTGCACAGTGTCAGCGTCAGCTCGACAAAATTCTTGATGATACAGATCTTGATAGCATCATAGAGGGTTATTTGGATCTGGAGATGCTCGAGTTTAAGCTACATGAGGTATTGGTAGCATCCATAAGTCAAGTCATGATGAAGAGCAATGGAAAGAATATAATGATCTCGAATGACATGGTTGAAGATCTTCTTAATGAAACTTTATATGGAGATAGTCCGAGACTTCAACAAGTCCTAGCTAACTTTTTGTTAGTATCTGTGAACTCTACACCAAGTGGTGGCAAGCTTAGTATTTCAGGCAAGCTAACTAAAGATCGCATAGGAGAATCTGTTCAGCTTGCTCTCTTGGAATTCAGGATAAGACATACAGGGGGTGGAGTGCCAGAAGAATTGCTTAGCCAAATGTTTGGTAGTGAAGCCGATGCATCTGAAGAAGGGATCAGCTTACTTGTCAGCAGAAAACTGGTCAAGCTGATGAATGGGGAAGTTCAGTACCTAAGAGAGGCTGGGCGATCAACTTTCATTATATCCGTTGAACTCGCAGTGGCTACCAAATCAAGCTGA
Protein Sequence
- >PGSC0003DMG400015766
MSSSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS