Information report for PGSC0003DMG400014195
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Arabidopsis thaliana — AT1G80680
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: M1B498
- RefSeq: XP_006341370.1
- AlphaFoldDB: M1B498
- KEGG: sot:102602221
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- OrthoDB: M1B498
- SMR: M1B498
- eggNOG: KOG0845
- STRING: 4113.M1B498
- HOGENOM: CLU_012427_0_0_1
Sequences
CDS Sequence
- >PGSC0003DMG400014195
ATGGAGGTTGAGTTAGGGACTCCTGAACAACTTATTGTTTCTCAATCTCAATGTAAAAGAAGAAAAATTTCTGCTTTAGATCAGATTTTGGGCGAGAACGAAGCTGATTTACCTACCTTGCGATCTCCTGATTATTTTACTGATCCATGCTTGAGTGAATTGGCTGTTAGGGAGCTAATGATCTCAGGGTATTGCAGTAAAGTTGAAAATTTTACTGTTGGGAGGTTTGGTTATGGATTTGTCAAATTTTCTGGGGAAACAGATGTTAGGGGGTTGGATTTGGATCGAATTGTTAAGTTTAGCAGACATGAGGTGATTGTATATGAAGATGAAAATGACAAGCCTCCAGTTGGCATGGGGCTTAACAAACCTGCTGAAGTAACTTTGCTACTGGAAATACGATCCTCCAAACACTATGACGTGGATTCTTCTAGAGAACTGGTGGAGAAATTAAGACTTAGAACAGAGAGACAAGGAGCGCGTTTTATCTCATTTGATCCATCAAATGGAGAATGGAAATTCTTCGTTCAGCATTTCAGCAGATTTGGTTTGAATGATGAGGAAGAAGATGAAGATATGATAATTGATGCTGTGTCTCCAGAGGTTCAAGATCCCGTAGATATGAATGGAGGAGATGTTTCTGACATTGATGAAGAAACCTTCTTAGCCAATACAACTGATCTTTCACATTCTCTTCCTGCCCATCTTGGGTTAGATCCTGTAAAGATGAAAGAAATGAGAATGCTGATGTTTCCAGCAGAAGAAGAGGATATAGATGATTATCATGGTGTTCCTTTTGATAGAAAACCACAATTCAGTAAAGAATCTTCAAAATCCCCTTTGCAGCATAAGTTCCAGAGAGTTAGTCCACCTTTAACTCGCAAGACTCCATTGGCTTTGATTGAATACAAACATGGTAGTTTTGGCTCGGACTCACCTGGGTCCATTTTGTTGACCCAACAAAATAAGGGTGTGCTTCTAAAGACAACAAAGACTGAAGGTTTCAAGCTGGATGTCAGGCAGCAAACACCTATAAGTGGAACCTACTCTTGTAATGTTGTTGATGCGGGATTGTTCATGGGTAGATCATTTGGAGTTGGCTGGGGGCCTAATGGTGTTCTTATTCATTCTGGCGCTCCAGTTGGTAGTAAAGACGATCAATGTTTGTCCTCAATAATCAATTTGGAGAAGGTTGCATTTGACCAAGTAGCTAGAGATGAAAATAAAAAGTTTAGGGAGGAACTTGTTGATTTGTGTTTTGATTCAACCCTCCATCTTCACAAGGAAATTACTCATGAAACCAAAGAGTTCGGGGAGGGACCCTTTGCGTTAAAGCTTCAAAGACTTATGTGTGATCGTCTAATGCTTTCAGATGTATGTCGGAGCTATATTGGTGTCATTGAGAGGCAATTGGAGGTTCCTGACTTATCTCCAGCATCCCGTGTTCTTCTGATGCACCAAGCAATGATTTGGGAATTAATAAAAGTGCTTTTCTCGACAAGACAATTGAGTGGGAAATTAAAGTCTCTTGAAGATGAGGATGAGGAAGATATGATACCTGATGCGAGAGAAACTTCTTCAGATGTTGATCCAGAAGCACTTCCATTGATAAGGAGAGCAGAATTCAGCTATTGGTTGCAAGAGAGTGTTTGTCACAGGGTACAGGAAGAAGTAAGTTCTTTGAATGATTCAAGTGATCTACAACATATGTTTTTACTTCTAACTGGTCGGCAGCTGGATGCTGCTGTGGAACTGGCGGCTTCTAGAGGAGATGTGCGGCTTGCATGTCTTCTTAGTCAAGCTGGTGGTTCGATGGTTAATCGTTCTGATGTTGCTAGGCAGCTTGATATTTGGAGAGTGAATGGGTTGGACTTCAATTTTGTTGAGACAGAGAGGATTAGGGTTTTTGAGTTGGTTGCTGGCAACATTCATAGAGCATTGCATGATGTAGACATTGACTGGAAAAGGTTTCTGGGGTTGTTGATGTGGTATCAGCTTCCACCAGAAACTGAATTGCCTATTGTGTTCCGCACATATCAGAGGCTTCTTAATGAAGGAAAAGCTCCATCTCCAGTTCCAGTTTATATTGATGAAGGACCTATAGAAGTGTCAATGAATTGGCATGCAGTGAAACATTCTGACCTCGGTTACTATCTTATGCTTCTTCATGCCAATCAAGAAATTGATTTCAGTGCTCTAAAGACGATGTTCAGTGCCTTTGCTTCAACAAATGATCCCCTTGACTACCATATGATCTGGCATCAGCGAGCTGTTTTAGAAGCCATTGGTGCTTTCAGTTCTAATGATCTTCATGTGCTAGACATTAGTTTCATTTCTCAGCTGCTATGCCTTGGTCAATGTCATTGGGCTGTCTATGTGGTGCTTCACATGCCTCACCGTGAAGATTGTCCTTATTTGCAAGCTGCTCTTATTAGGGAAATACTCTTCCAGTACTGTGAAACTTGGAGTTCTCAGGACTTGCAGCGGCAATTTATTGAGGATCTAGGTATTCCATCAGCATGGTTGAACGAGGCTTTGGCAACATATTTTAATTATTACTCTGAATTCCCCAAAGCCCTAGAACATTTTTTGGAATGCGGAAAGTGGCAGAAAGCGCACACTATTTTTATGACTTCAGTTGCTCATTCTCTTTTTCTATCAGAAGAACACTCAGAAATATGGAGGCTAGCAGCTTCCATGGAGGATCACAAATCAGAAATTGAAGATTGGGATCTGGGAGCTGGAATATATATATCTTTTTATTTGTTGAGAAGTTCTTTGCAGGAGGGCAGTGACACTATGAATCAAGACACTATAGAAAACAAAGACAATGCTTGTGCAGACTTCATTAGTCGCTTAAACAACTCTTTGGCTGTTTGGACAAACAGATTGCCTGTCAAAGCGAGGGTGGTTTATTCGAAAATGGCTGAGGAGATATGCAATTTGCTGCTTTCTGATAGCGGTGGAAGTTCATCAAATGAGGCCCAGCTAAGCTGCTACGATACCATATTCAAGGCACCCATACCTGAAGATACCCGTGCATACCATTTGCAGGATTCTGTGTCTCTTTTTACATCTTACCTTTCTGAGGTGCCGTCATAG
Protein Sequence
- >PGSC0003DMG400014195
MEVELGTPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTDPCLSELAVRELMISGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMGLNKPAEVTLLLEIRSSKHYDVDSSRELVEKLRLRTERQGARFISFDPSNGEWKFFVQHFSRFGLNDEEEDEDMIIDAVSPEVQDPVDMNGGDVSDIDEETFLANTTDLSHSLPAHLGLDPVKMKEMRMLMFPAEEEDIDDYHGVPFDRKPQFSKESSKSPLQHKFQRVSPPLTRKTPLALIEYKHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGTYSCNVVDAGLFMGRSFGVGWGPNGVLIHSGAPVGSKDDQCLSSIINLEKVAFDQVARDENKKFREELVDLCFDSTLHLHKEITHETKEFGEGPFALKLQRLMCDRLMLSDVCRSYIGVIERQLEVPDLSPASRVLLMHQAMIWELIKVLFSTRQLSGKLKSLEDEDEEDMIPDARETSSDVDPEALPLIRRAEFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQAGGSMVNRSDVARQLDIWRVNGLDFNFVETERIRVFELVAGNIHRALHDVDIDWKRFLGLLMWYQLPPETELPIVFRTYQRLLNEGKAPSPVPVYIDEGPIEVSMNWHAVKHSDLGYYLMLLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQLLCLGQCHWAVYVVLHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFIEDLGIPSAWLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLAASMEDHKSEIEDWDLGAGIYISFYLLRSSLQEGSDTMNQDTIENKDNACADFISRLNNSLAVWTNRLPVKARVVYSKMAEEICNLLLSDSGGSSSNEAQLSCYDTIFKAPIPEDTRAYHLQDSVSLFTSYLSEVPS