Information report for PGSC0003DMG400013334
Gene Details
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Functional Annotation
- Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.
Homologous
- Actinidia chinensis: CEY00_Acc09715, CEY00_Acc17492
- Daucus carota: DCAR_004829, DCAR_000480
- Gossypium hirsutum: Gohir.D11G159400
- Lactuca sativa: gene-LSAT_7X14480
- Manihot esculenta: MANES_12G068900
- Medicago truncatula: Medtr5g085250
- Nicotiana attenuata: A4A49_29644, A4A49_35805
- Populus trichocarpa: POPTR_014G159300v3
- Sesamum indicum: SIN_1026932
- Solanum lycopersicum: Solyc11g011980.2, Solyc12g005950.2
Gene Resources
- Pfam: PF00400 PF00097
- UniProt: M1B157
- RefSeq: XP_006352383.2
- KEGG: sot:102605430
- OMA: TTNHLYP
- InterPro: IPR001680 , IPR001841 , IPR013083 , IPR015943 , IPR017907 , IPR019775 , IPR036322 , IPR042755
- PANTHER: PTHR44080 , PTHR44080:SF8
- SUPFAM: SSF50978 , SSF57850
- PROSITE: PS00518 , PS00678 , PS50082 , PS50089 , PS50294
- Gene3D: 2.130.10.10 , 3.30.40.10
- OrthoDB: M1B157
- SMR: M1B157
- CDD: cd16504
- eggNOG: KOG0297
- STRING: 4113.M1B157
Sequences
CDS Sequence
- >PGSC0003DMG400013334
ATGGGAGGAGGAGGAGAGCGTAATTCAATGGGAGTATTAGTGCCGACGGTGAACGCCGGTGAAACTTCAGCTCCGGCCGGAGCGGAGACGGAGGCGGCGGTGGTTGGGACGGAGGTGGTGGTGGTGACGGAGAGAGTTGCGGAGGAGGAAGAGGAAGAGGAAGAGGAGGTGGATAAGGATATACTGTGTCCGATATGTATGCAAATTATAAAGGATGCGTTTCTAACGGCGTGTGGACATAGTTTTTGTTATATGTGCATTGTTACTCATTTGCAGAATAAAAGTGATTGTCCTTGTTGTTCTCATTACTTGACGACGAATCATCTTTATCCTAATTTCCTTCTTAATAAGTTATTGATGAAGAAATCTGCTCGCCAAATGGCCAAAAGTGCTACACCTGTGGAACAACTTCGCCAAGCAATACAGCAGGGATGCGAGGTGTCCGTTAAAGAGCTGGATAGTCTATTATCACTTCTTATGGACAAGAAAAGAAAAATGGAACAAGAAGAAGCTGAAACAAATCTTCAGATTCTGCTCGAGTTTCTCCAGTGTTTAAAGAAGCAAAAAGTTGACGAGCTTAATGAGATTCAAAATGATCTCCAATACATTAAAGAAGACATAAATGCTGTGGAGAAGCGTAGAATAGAGTTATATAGGACAAGAGGTAGATATTCTGCGAAAATGAGAACGCTAGTAGATGATTCATCTGCAATGACAGTCAGGCCTCCATTGAGAGATAAGGGAAGTGGTGCAATTGTTTCTAGTCCTGTCAATTTACAAGAACAAGGTCGTGCTGGCACTTCACAGACCAGGAATACTGATACAAGAGCTCCTCAGAATCCTCAAATTGTGCAACGGAAGGATGACAACCAAGGTGGATCAGATTCACAGGATCCTAATCAACCTGGAAAGTCATTAGCAAGGAAACGACGCGTTCATGCACAGTTCAATGAGCTTCAAGATTGTTACCTACAAAAGAGGCGCTATTGGGCAAGACAGTCGCAGAAACAGGGAGAAAGGGTAGCAAATATCATGAATAGAGTAGGTTATTCTGCGGGACTTGAGGATTTTCAATCTGTTCTGTCTACCTTTACACGATACAGTAGTCTGCGGGTTGTTGCTGAACTCAGGCATTCTGACATTTTCCACTCAGCCAATATTGTTTCAAGTATTGAATTTGACCGAGATGATGAATTGTTTGCTACTGCTGGGGTATCACGAAGAATTAAGGTCTTCGAGTTTTCATCAGTGGTAAACGAACCAGCTGATGCGCAATGTCCAATTGTTGAAATGTCTACCCGATCTAAACTAAGTTGTTTGAGTTGGAACAACTACACTAAAAACCACTTAGCAAGCAGTGACTATGAGGGCATAGTAACGGTTTGGGATGTTACAACTCGTCAGAGTGTGATGGAGTACGAGGAGCATGAAAAACGAGCATGGAGTGTTGACTTTTGTCGTACTGAACCTTCTATGCTTGTATCTGGTAGTGATGATTGCAAGGTTAAAGTTTGGTGCACGAATCAGGAAGCTAGTGTTCTTACCATTGACATGAAAGCTAACATTTGCTCGGTGAAGTATAATCCTGGATCCAGTGCTCACATAGCTGTGGGTTCTGCAGATCATCACGTTCACTATTACGACTTGAGAAATATTAGCCAGCCACTGTACATTTTCAGTGGACACCGTAAAGCTGTTTCATATGTAAAATTTCTATCAAACTATGAGCTAGCTTCTGCATCAACCGATAGTACACTACGTTTGTGGGATGTCAATGAGAACGTTCCACTGCGTACGTTTAAAGGACATACAAACGAGAAGAACTTTGTTGGTCTTACAGTAAACAGTGAATACCTTGCATGTGGAAGTGAGACAAATGAAGTCTTTGTCTATCACAAGGCAATTTCTAAACCAGCAGCTTGGCACAGATTTGTTTCTGATGATCAGAATGATCCAGACGGGGACATGGGATCATTTTTCATCAGTGCTGTTTGTTGGAAACGGGACAGCCCAACGATTGTTACAGCAAACAGTCAAGGGACAATAAAAGCACTTGTTCTTGCTGCTTGA
Protein Sequence
- >PGSC0003DMG400013334
MGGGGERNSMGVLVPTVNAGETSAPAGAETEAAVVGTEVVVVTERVAEEEEEEEEEVDKDILCPICMQIIKDAFLTACGHSFCYMCIVTHLQNKSDCPCCSHYLTTNHLYPNFLLNKLLMKKSARQMAKSATPVEQLRQAIQQGCEVSVKELDSLLSLLMDKKRKMEQEEAETNLQILLEFLQCLKKQKVDELNEIQNDLQYIKEDINAVEKRRIELYRTRGRYSAKMRTLVDDSSAMTVRPPLRDKGSGAIVSSPVNLQEQGRAGTSQTRNTDTRAPQNPQIVQRKDDNQGGSDSQDPNQPGKSLARKRRVHAQFNELQDCYLQKRRYWARQSQKQGERVANIMNRVGYSAGLEDFQSVLSTFTRYSSLRVVAELRHSDIFHSANIVSSIEFDRDDELFATAGVSRRIKVFEFSSVVNEPADAQCPIVEMSTRSKLSCLSWNNYTKNHLASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFCRTEPSMLVSGSDDCKVKVWCTNQEASVLTIDMKANICSVKYNPGSSAHIAVGSADHHVHYYDLRNISQPLYIFSGHRKAVSYVKFLSNYELASASTDSTLRLWDVNENVPLRTFKGHTNEKNFVGLTVNSEYLACGSETNEVFVYHKAISKPAAWHRFVSDDQNDPDGDMGSFFISAVCWKRDSPTIVTANSQGTIKALVLAA