Information report for Pav_sc0007253.1_g130.1.mk
Gene Details
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Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Brassica napus: BnaC06G0448800ZS
- Citrullus lanatus: Cla97C09G184470
- Glycine max: Glyma.15G265300, Glyma.08G162300
- Gossypium hirsutum: Gohir.D01G085300, Gohir.A01G100800
- Juglans regia: Jr06_11960, Jr06_11950, Jr06_11970, Jr15_08850
- Manihot esculenta: MANES_16G052800
- Medicago truncatula: Medtr2g063480
- Prunus persica: PRUPE_4G125000
- Rosa chinensis: RchiOBHm_Chr5g0023031
- Vitis vinifera: VIT_19s0085g01090
Gene Resources
- Pfam: PF07926
- UniProt: A0A6P5RN35
- RefSeq: XP_021802386.1
- KEGG: pavi:110746470
- InterPro: IPR012929
- PANTHER: PTHR18898 , PTHR18898:SF2
- Gene3D: 1.10.287.1490
Sequences
CDS Sequence
- >Pav_sc0007253.1_g130.1.mk
ATGCCGCTCTTCGTTTCCGACGAGGACTTCTCCCGCCACGGAAACGACGCCACTTGGGTGGCGGACAAGGCCGACGCGTTCATCCGCGACTTACAGACGGAGCTAGAGACGTTCAGGGCCCAGAACGACGCCGCTTCTATCACGGCCGAGCAGACCTGCTCCCTCCTCGAGCAGAAGTACCTATCACTCTCCGATGAATTCTCCAAGCTCGAGTCGCAATACGCGCAGCTTCAGTCCTCCCTCGACCACCGCCTCTCCGAGGTCGCCGAACTCCAGTCCCAAAAGCACCAGCTCCATCTCCAATCGATTGGGAAGGATGGGGAGATAGAGAGGTTTAAGACGGAGGTGTCGGAGCTGCACAAATCAAAGAGGCAGTTGATAGAGTTGGTGGAGCAGAAGGATTTGGAGATTAGTGAAAAGAATGCCACCATCAAGTCTTATATGGACAGGATTGTTTATTCATCAGACAATGCTGCACAAAGGGAGGCCCGTTTAAGTGAAGCTGAGGCAGAATTAGCACGCACCAAGGCTTCATGTACTCGTCTATCACAGGAGAAAGAACTTATTGAGAGGCATAATGTCTGGCTTAATGATGAGTTAACAGAGAAAGTTGACAGTCTCATTGGGCTACGTAGAACGCATGCTGATGTTGAGGCAGATTTGTCTTCTAAACTTGCAGATGTTGAGAGACAATTCAATGAATGCTCTAGCTCTTTAAAATGGAACAAGGAAAGAGTGAGGGAACTGGAAGCAAAGCTAAGATCTCTACAGGAGGAACTATGCTCATCTAAAGATGCTGCTGCAGCCAATGAAGATCGGTTAAACGCTGAACTTTCAACATTAAATAAGCTTGTTGAACTATATAAAGAAAGTTCTGAGGAATGGTCCAAGAAGGCCGGAGAGCTTGAGGGTGTGATCAAGGCTCTGGAGACACATTTGAGTCAAGTGGAAAATGATTACAAAGAGAGACTTGAGAGGGAAGAATCAGCAAGAAATCAATTTCAGAAGGAAGCTGCAGATCTGAAAGCAAAACTTGAGAAGTGTGAAGCAGAAATCGAAACGAGCAGGAAAGCGAATGAGCTAAATCTTCTTCCACTCAGTAGTTTTACCACGGATGCATGGACGAATTCATTTGAATCTACTGACATGGTTGAGGTTAATCGTGCGGTTGTCCCAAAGATTCCTGCTGGTGTTTCAGGAACAGCATTAGCAGCTTCACTTCTACGGGATGGTTGGAGTCTTGCAAAAATGTATGCGAAGTACCAAGAGGCTGTTGATGCCTTTCGTCATGAGCAGTTGGGAAGGAAGGAATCTGAGGCAATTTTGCAACGGGTTCTATATGAATTAGAGGAGAAAGCAGAAGTCATTTTGGATGAAAGAGTGGAACATGAGAGAATGGTTGAGGCATATTCTATGATCAACCAAAAACTGCAGAATTCAATTTCTGAACAGGCAAACTTAGAGAAAACCATCCAGGAGTTAAAGGCGGAGATAAGGAGGCATGGGCGTGACTACACATTTGCTCGAAAAGAGATCTCTGATCTCCAGAGAGAGGTGACAATCCTTCTGAAAGAATGTCGAGATATACAGCTTCGTGGCACATCTTCTGGTCATGATAGTCATGACTACGGTACTGTTGCTGTGGTTGAGATGAATGCTGAATCTGATGCTGAAATAGTCATATCTGAACATCTTTTGACCTTCAAGGACATAAATGGACTAGTTGAGCAGAATGCACAGCTCAGGAGTCTTGTTCGCAATCTTTCTGACCAGCTTGAAAATAGGGAAATGGAGGTCAAGGAAAAGTTTGAAATGGAGCTCAAGAAACATACTGATGAAGCTGCCTCTAGAGTTGCGGCAGTGTTACAAAGAGCTGAAGAGCAAGGGCACATGATTGAATCCCTTCACTCCTCCGTTGCAATGTACAAAAGGTTATATGAAGAGGAGCATAAACTTCATTCATCTAGTCCCCGCTTAGCAGAGGCAGCTCCAGAAGAAAGAAGAGCTGACGTTAAGCTTCTCCTTGAGAGTTCCCAGGAAGCTACCAGAAAGGCCCAAGACCAGGCTGTAGAACAAGTGAAATGTCTGGAGGAAGATTTGGCAAAGACCAGGAGTGAGATCATATCATTGCGGTCAGAGCGTGACAAGTTGGCTTTGGAAGCAAATTTTGCTCGAGAAAGACTTGAGAGCTTCATGAAAGAATTTGAGCATCAGAGAAAAGAAACAAATGGTGTTTTAGCAAGGAACGTTGAGTTCTCTCAGTTAATAGTTGACTACCAACGGAAGCTTCGTGAAAGTTCTGAATCTGTGCAAACTGCTGAGGAGCGTTCTAGGAAGTTCACTATGGAGGTATCTGTTTTGAAGCATGAAAAAGAGATGTTGGAACATGCTGAGAAGAGAGCTTGTGATGAAGTTCGTAGTTTGTCGGAGAGGGTCTATAGACTTCAGGCTAGTTTAGACACTATTCAGAGTGCCGAGCAAATTCGTGAGGAGGCAAGAGCTGCTGAGAGGAGAAGACAAGAAGAGTATACAAAACAAATAGAGAGGGAGTGGGCAGATGTCAAGAAAGATCTACAAGAAGAGCGCAACAATGCCCGCACTCTCACTCTTGACCGTGAGCAGACCATACAAAATGCCATGAGACAAGTTGAAGAAATGGGAAAAGAGTTGTCTAATGCATTGCATGCTGTTGCATCAGCTGAGAGTAGAGCTGCTGTAGCCGAGGCTAAACTGACTGATCTGGAGAAAAAGATAAGATCCTCCGATATTAAGGTTGTGGATATTGATGGTGAAAGTGGATCTTCCTCTTTGACGAGTGATGAGGCTGTGGTGGCATTGCGTGCTGCAAAGGAAGAGATCGAAAAATTGAAAGAGGAAGTGAAAGCTAATAAGGATCACATGCTACAGTACAAGAGCATAGCTCGGGTAAACGAAGATGCATTGAGACAGATGGAATTTGCCCATGAAAACTTCAAGATTGAGGTACTTCTGTGTGTCAACCTTTTGGCTTGTTTGCATTATTATGTCAATGTCAAATAA
Protein Sequence
- >Pav_sc0007253.1_g130.1.mk
MPLFVSDEDFSRHGNDATWVADKADAFIRDLQTELETFRAQNDAASITAEQTCSLLEQKYLSLSDEFSKLESQYAQLQSSLDHRLSEVAELQSQKHQLHLQSIGKDGEIERFKTEVSELHKSKRQLIELVEQKDLEISEKNATIKSYMDRIVYSSDNAAQREARLSEAEAELARTKASCTRLSQEKELIERHNVWLNDELTEKVDSLIGLRRTHADVEADLSSKLADVERQFNECSSSLKWNKERVRELEAKLRSLQEELCSSKDAAAANEDRLNAELSTLNKLVELYKESSEEWSKKAGELEGVIKALETHLSQVENDYKERLEREESARNQFQKEAADLKAKLEKCEAEIETSRKANELNLLPLSSFTTDAWTNSFESTDMVEVNRAVVPKIPAGVSGTALAASLLRDGWSLAKMYAKYQEAVDAFRHEQLGRKESEAILQRVLYELEEKAEVILDERVEHERMVEAYSMINQKLQNSISEQANLEKTIQELKAEIRRHGRDYTFARKEISDLQREVTILLKECRDIQLRGTSSGHDSHDYGTVAVVEMNAESDAEIVISEHLLTFKDINGLVEQNAQLRSLVRNLSDQLENREMEVKEKFEMELKKHTDEAASRVAAVLQRAEEQGHMIESLHSSVAMYKRLYEEEHKLHSSSPRLAEAAPEERRADVKLLLESSQEATRKAQDQAVEQVKCLEEDLAKTRSEIISLRSERDKLALEANFARERLESFMKEFEHQRKETNGVLARNVEFSQLIVDYQRKLRESSESVQTAEERSRKFTMEVSVLKHEKEMLEHAEKRACDEVRSLSERVYRLQASLDTIQSAEQIREEARAAERRRQEEYTKQIEREWADVKKDLQEERNNARTLTLDREQTIQNAMRQVEEMGKELSNALHAVASAESRAAVAEAKLTDLEKKIRSSDIKVVDIDGESGSSSLTSDEAVVALRAAKEEIEKLKEEVKANKDHMLQYKSIARVNEDALRQMEFAHENFKIEVLLCVNLLACLHYYVNVK