Information report for Pav_sc0001740.1_g280.1.mk
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Actinidia chinensis: CEY00_Acc17948
- Citrullus lanatus: Cla97C06G128240
- Cucumis melo: MELO3C026154
- Cucumis sativus: CsGy1G000010
- Glycine max: Glyma.06G162500, Glyma.04G203000
- Gossypium hirsutum: Gohir.A11G039100, Gohir.D11G042400, Gohir.D03G111200, Gohir.A03G055400
- Juglans regia: Jr09_00040, Jr02_00090
- Populus trichocarpa: POPTR_012G111200v3, POPTR_015G109300v3
- Prunus persica: PRUPE_5G139000
- Rosa chinensis: RchiOBHm_Chr7g0188331
- Vitis vinifera: VIT_14s0068g00720, VIT_00s0283g00020
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0A6P5TQD4
- RefSeq: XP_021829362.1
- AlphaFoldDB: A0A6P5TQD4
- KEGG: pavi:110769642
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- CDD: cd20443
Sequences
CDS Sequence
- >Pav_sc0001740.1_g280.1.mk
ATGGCATCATCAACAGCTGCGGCCACAGGATGGTACAGAGGGAGAGTGAAGGCAGTTCCTTCAGGGGACTCCTTGGTCATCATGGCCCTCACAGCCAACAAGGCAGGACCCCCACCTGAAAGAACCATCACTTTGTCATCGCTTATGGCTCCGAAACTGGCTCGTAGAACTACCAAGGATGAGCCATTTGCATGGGACAGCAGAGAGTTTCTGAGGAAGCTCTGCCTGGGAAAGGAGGTGGCTTTCAGAGTGGACTACGTTGTACAACAGATAGGGCGAGAATTTGGCTCAGTTTTTCTTGGTGACAAGAATGTTGCAATGCTGGTTGTTGCTGAAGGCTGGGCAAAGGTCAAGGAGGTTAAACAGAACCAACAGAAAGGAGAAGCTAGTCCTTATATTGCAGAGCTGCTACGTCTCCAAGAACAAGCTAACACCCAGGGCCTTGGTCTCTGGAGCAAGGTTCCTGGTGCTGCTGACACATCCATTAGGACTCTACCGCCCTCTGCCATTGGTGATCCAAGCAATTTAGATGCCATGAGTCTGTTGGCTGCAAATAAGGGCAGGCCCATGGAAGGTATTGTTGAGCAAGTTCGTGATGGAAGCACAGTTCGGGTCTACTTGCTTCCCGATTTTCAGTTTGTTCAAGTATTCGTTGCAGGAACTCAGGCCCCATCAGTGGGAAGGAGACCTATAGCTTCAGAAGTTGTTGCTGAACCCGAAACAACTTCTGATAAAACAAATGGTGATGTTTCTACTGAGCCTCGAGCCCCTCTAACTTCTGCCCAAAGAATTGTAGCTTCAACAACATCATCTGTTGAAATTGCTGCTGATCCATTTGCACTGGAAGCTAAACATTTTACAGAAACTCGCGTGCTGCATAGAGATGTCCGCATCGTTCTGGAAGGTGTTGACAAATTCAGCAATTTGATTGGGTCAGTATATTACCCGGATGGAGACTCAGCGAAAGACCTGGCCCTGGAGCTTGTTGAAAATGGTTATGCAAAATACGTTGAATGGAGTGCTAACATGATGGAAGAAGATGCGAAGAGGCGGCTGAAGGCTGCAGAGCTTGAAGCTAAGAAAAGCAAGTTGAGGATCTGGACAAACTACGTACCCCCAGTTACAAATTCAAAGGCAATTCATGACCAGAATTTCACTGGCAAGGTTGTGGAGGTTGTCAGCGGGGACTGTGTCATTGTTGCTGATGATTCTGTTCCATTCGGCAGTCCACTAGCAGAGAGGCGAGTTAATCTTTCAAGTATTAGGTGCCCGAAAATGGGCAATCCTCGTAGAGAAGAAAAGCCGGCTCCATATGCCCGTGAAGCAAAAGAGTTCCTGAGAACCCGCCTTATTGGACTCCAAGTGAATGTTCAAATGGAGTATTCAAGGAAGATCACGGCAGATGGAGCTGCAGTTTCTACTGGACCTGCAGATTCCAGAGTCATGGATTTTGGATCAGTCTTCCTTGTAAAGGCTGAGGGTGATGATGCTCCAGCACCTGCTTCATCTGCTCCTGGCAGCCAGCCAGCTGGGCTGAATGTTGCTGAACTGGTGGTTGCACGTGGCTTTGGCACTGTTATTAGACATAGAGATTTTGAAGAGCGGTCAAACTATTATGATGCACTTCTTTCGGCGGAATCACGTGCTATTGCTGGCAAAAAAGGAATACATTCTGCCAAGGATCCTCCAGTGATGCACATTACAGACCTGATGCAGGCATCAGCTAAGAAAGCCAGAGATTTCTTTCCGTTCTTACAAAAAAGGAGGAAAATTCCTGCCGTTGTGGAATATGTCTTTAGTGGCCATCATGGGCACCTTCTTGAACAAGCTGAGCAATCTGCAAAAAGGCAGAAATTGAAAATTTGGGAGAACTATGTTGAAGGAGAGGAAGTTTCCAATGGTTCAGCTGTCGACAACAACAAACAGAAAGAAGTGCTAAAGGTTGTGGTAACAGAAGTTTTGGGAAGCGGTGGTAAATTTTATGTTCAGACAGCTGGTGATCAGAAAATTGCCTCTATACAGCAACAGCTTGCATCTTTGAGTATTCAAGAAGCTCCCGTGATTGGTGCTTTTAATCCTAAGAAGGGTGACATTGTCCTTGCTCAGTTTAGTGCAGATAATTCTTGGAACCGAGCAATGATTGTCAATGCACCTCGAGGAGCTGTGGAATCCCCTAAAGACAAGTTTGAAGTCTTCTACATTGATTATGGTAATCAAGAGGTTGTCCCTTACAGTGAGTTACGGCCTCTTGACCCTTCAGTTTCCTCTGCACCTGGTCTTGCTCAATTATGCAGCCTTGCATATGTTAAAGTCCCGAGCTTGGAGGAGGACTTTGGTCAAGAAGCAGCAGAGTATTTAAGTGAGCAGACATTAAATAGTTCCACAGAGTTTAGGGCCATGATTGAGGAAAGGGATCTTTCAGGGGGAAAAGTTAAAGGCCAGGGAACTGGACCGGTTCTTGTTGTGACTCTTGTCGCTGTGGATGCTGAGATCAGTGTAAATGCTGCCATGCTTCAGGAAGGACTTGCTAGGTTAGAGAAACAGAAGAAACGGGAAACTAAGGAGCGGAAGACGGCAATCGAGAACTTGGAAAAGTTCCAGGAAGAAGCAAGGGCTGATAGGCGGGGGATGTGGCGCTATGGAGACATCCAGTCAGATGATGAGGACATTGCTCCTCCCTTAAGAAAGGCTGCTGGCAAGCGATGA
Protein Sequence
- >Pav_sc0001740.1_g280.1.mk
MASSTAAATGWYRGRVKAVPSGDSLVIMALTANKAGPPPERTITLSSLMAPKLARRTTKDEPFAWDSREFLRKLCLGKEVAFRVDYVVQQIGREFGSVFLGDKNVAMLVVAEGWAKVKEVKQNQQKGEASPYIAELLRLQEQANTQGLGLWSKVPGAADTSIRTLPPSAIGDPSNLDAMSLLAANKGRPMEGIVEQVRDGSTVRVYLLPDFQFVQVFVAGTQAPSVGRRPIASEVVAEPETTSDKTNGDVSTEPRAPLTSAQRIVASTTSSVEIAADPFALEAKHFTETRVLHRDVRIVLEGVDKFSNLIGSVYYPDGDSAKDLALELVENGYAKYVEWSANMMEEDAKRRLKAAELEAKKSKLRIWTNYVPPVTNSKAIHDQNFTGKVVEVVSGDCVIVADDSVPFGSPLAERRVNLSSIRCPKMGNPRREEKPAPYAREAKEFLRTRLIGLQVNVQMEYSRKITADGAAVSTGPADSRVMDFGSVFLVKAEGDDAPAPASSAPGSQPAGLNVAELVVARGFGTVIRHRDFEERSNYYDALLSAESRAIAGKKGIHSAKDPPVMHITDLMQASAKKARDFFPFLQKRRKIPAVVEYVFSGHHGHLLEQAEQSAKRQKLKIWENYVEGEEVSNGSAVDNNKQKEVLKVVVTEVLGSGGKFYVQTAGDQKIASIQQQLASLSIQEAPVIGAFNPKKGDIVLAQFSADNSWNRAMIVNAPRGAVESPKDKFEVFYIDYGNQEVVPYSELRPLDPSVSSAPGLAQLCSLAYVKVPSLEEDFGQEAAEYLSEQTLNSSTEFRAMIEERDLSGGKVKGQGTGPVLVVTLVAVDAEISVNAAMLQEGLARLEKQKKRETKERKTAIENLEKFQEEARADRRGMWRYGDIQSDDEDIAPPLRKAAGKR