Information report for Pav_sc0000877.1_g1170.1.mk
Gene Details
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Functional Annotation
- Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.
Homologous
- Citrullus lanatus: Cla97C04G079000
- Cucumis melo: MELO3C001999
- Glycine max: Glyma.06G196200
- Gossypium hirsutum: Gohir.D03G094200, Gohir.A03G067700
- Juglans regia: Jr02_06070
- Manihot esculenta: MANES_06G089800, MANES_14G081500
- Prunus persica: PRUPE_5G197900, PRUPE_5G198000
- Rosa chinensis: RchiOBHm_Chr7g0182001
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: A0A6P5T2N6
- RefSeq: XP_021820733.1
- AlphaFoldDB: A0A6P5T2N6
- KEGG: pavi:110762404
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF1
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
Sequences
CDS Sequence
- >Pav_sc0000877.1_g1170.1.mk
ATGTCGGTCTTGACGATGTCGTTACAGCCAAAGCTGGTGGAGCTCGACAATTACTCCACCCTGGTCCGACCTGCCGACCTCTCAATCGCCTCCTTGCCCATGCGCAGCAATGGCATTAACAGAGACACCGTCGCTTCCTCCCCTACCTTTCAAGAGATTGCAGATGAGGTCTACGACATTCTCCACGGACGTATATGGGCAGGTCACAATATACGGAGGTTTGATTGTGCTCTGATCCGGGAGGCTTTTGCACACATTGGTCGGCCTGCACCCGAACCCAAGGGTACTATTGATTCCTTGGCATTGTTGACACAGCGCTTTGGAAGGAGAGCTGGTGACATGAAGATGAACACTCTTGCAAACTATTTTGAGCTTGGACAGCAGGAACACAGGAGTTTGGCTGATGTTCGAATGAATCTTGAAGTTTTGAAATACTGTGCAACTGAAGAGTTGAATCAGCCGGACCCCGCTGTGGGATTTTTAGAGCTTGATCAAGTTTTTATTCCTTCTATCTATGCTTCCCTTGTCCCGTGGTATCGTGGAAGTCATAGGATTAAGTTACTACACGATCTGCAGCTTTGCTGTGGGCATATGAAAATACGGTTTGGAATCAATATCAATTCAGGGTTTTTTGATTATGCTGGACGGCCAAAGTTGAATATTATCGCAGACGCTTCACCAAATTTATGTGAAGTTCTTGATGCATGTGATGACATTGCAAGTAAGTTGTCTGTGGATTCTGGAAGCAATTCCGAATGGTGGCCTGTTGTGATCCGGCAACACGACTACCCCACAGTGAGATTGCATATACCAGTATGTGGGGATATTAGGATCTACGCCACAGAGATATATAAAAAAGAGCCTTCTGGCACTGAGCAGAGGCTAGGCTTCACTAAGTTTGATGCTTCAGAACTTAGTACCTTGTTCAAACCGGGGAGTTTTATCGATGCATTCTTCTCCTTGGATCCATATGACTATCGGCAGAATGCAGGCATTAGGTTGGTGGCAAAGAAATTGAAAGGTAAGCAAATAGACATTGGCAATAGCAGCAGGCAATATGGTGGCAGCCGAGCTAAGAGCAAGAACATGTCCATAGATCGTAGCAGAGTAAGAGTTTTGTTGTGTGACCGCGATGCCGAGAGTTGTGAGGAGGTTTGCACACTACTGACAACATGCTCTTATCAGGTAACATCAGTAAGCTCTGCTGTGGAGGTGTTGGATGCTCTGAATGCTGAGTGGGCATTCATTGATATCATACTTGCTGCAGTTGACCTTCCCATAGATGCAAGCATGAGAATGTTGAAATATATAATGCAGAATCTGCATTTCAAGCATATCCCAGTGATAATGCTGTCGAAGCAGAACGAAAGCCGTTTTCTTTACAATTTCTTAAAATTTGGTGCTACTGATTATCTGGTGAAGCCATTATGCATTGATGAGATATTAAACTTGTGGATCCACTCTTGGAGGCAGAGGAAGCCACCTAAGGGGCTCGAGCCACCACAGAAGAGCATTAATCTTGTGGTTTCAACTGAGCCTACTATGAACAACATCTTGGTCTTAGATGAGAGTATCAGAGATGAAGAGTTTCCAGAGGATCCAGAGCCAACTTTGTGTCGGCTTGGGCTTTGGTGGGTTTTGGCTATGGAGTCTAAGGAGCTCAATTTGAAGAAGCACTCTGAAAATGGTGGTGGTGGTGGTGATGGGTTCATTGACAGAAGCAAAGTGAGGATCTTGTTGTGTGATAACGACGAGTACAGTTCGGAAGAGGTTTTTGCCCTTCTTCTGAAATGCTCTTACCAGGTCATTTCAGTGAGGTCTCCAAGACAGGTGATTGAAGCATTGAATGCTGAAGCACCTGATATAGATATCATACTTTCCGAAGTTGACCTTCCCATGAGAAAAGGCTTGAAAATGTTGAAGTATATCACACAGGATAGAGAGTTAAGGCGCATTCCTGTAATCATGATGTCAGCACAAGATGAGGTCTCTACTGTTGTTAAGTGCTTGAAGCTTGGAGCAGCAGACTATCTCGTAAAGCCTTTACGAACTAATGAGCTTCTAAACTTGTGGACACACATGTGGAGAAGAAGGCGCATGTTTTCTACTGCTGCTGCTATGGAGTTTCCAGTCAATAATGTATCAGAATTTCGGCCTGATGTCCCAGGAATACATGACCACCAAGCTGGAAAATCTTCATCTGGCCCAAAAAAGAGTAAACTAAAGATGGGAGAGTCATCATCATTCTTTACATATGTTAAATCAAGCACGCTTGGCTGCGCTGAAGACAATGTTGTTGAACAAGTGAGGATAAAAGAGAAACATCAAGCATTTGCTTACCAAGTTGTTGATGATCCCCAAGTACACGTAAGTCGAGAGGCACAGGAAAGCAATTCAGAAGGAGATGACTTGCAGAGCAGTAATAGTAGTGTTCCAGATTCCCTTTCATTGGAGGGGTCTTGTACCCCACTTGGATCAATGTTACTTCGACATGAAAAGAATTTTGAGAAAGACCAATCCTCACTGGTGCTTGTGCATCCAAGAAATGAACTTCAACAAGATTTTTCTGGCTTACCTGCCCAAGCTGCCTATCCGTATTATATTCCAGGGGTTGTGAATCAAGTTATGATGTCATCATCAACACAAGTGCATCAAAAGAATCCGCATGACATGCAAAATCATTCTACAACCGCTATTATGCCACAATACAATCATCTTCCGCACTGCCCTCCAGATGTAACTGGGATGACTCCATTCCCCTGCTACCAGTTTAGCATATGCTTACAACCTGGTCAAATTCCTAATACTCATCCATGGCCATCACTTGGAATTTCATCTTCCACTGAAGTGAAATTAAATAAGGTTGACAGAAGAGAGGCAGCATTGATTAAATTTAGGAAAAAAAGAATGGAGCTTTGTTTTGATAAAAAGATCAGGTATGTTAACCGAAAGCGACTTGCTGAAAGGAGACCTCGTGTGCGGGGACAATTTGTGAGAAAGGTAAGTGGTGTAAATCTGGAGCTTCAGTCAAGGGAGTACTCTCCAGAAGATGGTTCTTCTGGATGTTAA
Protein Sequence
- >Pav_sc0000877.1_g1170.1.mk
MSVLTMSLQPKLVELDNYSTLVRPADLSIASLPMRSNGINRDTVASSPTFQEIADEVYDILHGRIWAGHNIRRFDCALIREAFAHIGRPAPEPKGTIDSLALLTQRFGRRAGDMKMNTLANYFELGQQEHRSLADVRMNLEVLKYCATEELNQPDPAVGFLELDQVFIPSIYASLVPWYRGSHRIKLLHDLQLCCGHMKIRFGININSGFFDYAGRPKLNIIADASPNLCEVLDACDDIASKLSVDSGSNSEWWPVVIRQHDYPTVRLHIPVCGDIRIYATEIYKKEPSGTEQRLGFTKFDASELSTLFKPGSFIDAFFSLDPYDYRQNAGIRLVAKKLKGKQIDIGNSSRQYGGSRAKSKNMSIDRSRVRVLLCDRDAESCEEVCTLLTTCSYQVTSVSSAVEVLDALNAEWAFIDIILAAVDLPIDASMRMLKYIMQNLHFKHIPVIMLSKQNESRFLYNFLKFGATDYLVKPLCIDEILNLWIHSWRQRKPPKGLEPPQKSINLVVSTEPTMNNILVLDESIRDEEFPEDPEPTLCRLGLWWVLAMESKELNLKKHSENGGGGGDGFIDRSKVRILLCDNDEYSSEEVFALLLKCSYQVISVRSPRQVIEALNAEAPDIDIILSEVDLPMRKGLKMLKYITQDRELRRIPVIMMSAQDEVSTVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMFSTAAAMEFPVNNVSEFRPDVPGIHDHQAGKSSSGPKKSKLKMGESSSFFTYVKSSTLGCAEDNVVEQVRIKEKHQAFAYQVVDDPQVHVSREAQESNSEGDDLQSSNSSVPDSLSLEGSCTPLGSMLLRHEKNFEKDQSSLVLVHPRNELQQDFSGLPAQAAYPYYIPGVVNQVMMSSSTQVHQKNPHDMQNHSTTAIMPQYNHLPHCPPDVTGMTPFPCYQFSICLQPGQIPNTHPWPSLGISSSTEVKLNKVDRREAALIKFRKKRMELCFDKKIRYVNRKRLAERRPRVRGQFVRKVSGVNLELQSREYSPEDGSSGC