Information report for Pav_sc0000663.1_g240.1.mk
Gene Details
|
|
Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Actinidia chinensis: CEY00_Acc29548
- Citrullus lanatus: Cla97C02G048640
- Cucumis melo: MELO3C014532
- Cucumis sativus: CsGy6G022870
- Glycine max: Glyma.14G005800
- Gossypium hirsutum: Gohir.D10G082300, Gohir.A10G069101
- Juglans regia: Jr07_32080
- Manihot esculenta: MANES_04G104700
- Nicotiana attenuata: A4A49_21629
- Populus trichocarpa: POPTR_003G180100v3
- Prunus persica: PRUPE_2G099100
- Rosa chinensis: RchiOBHm_Chr1g0336931
- Solanum tuberosum: PGSC0003DMG400014195
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: A0A6P5SRG4
- RefSeq: XP_021816835.1 , XP_021816837.1
- KEGG: pavi:110759114
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
Sequences
CDS Sequence
- >Pav_sc0000663.1_g240.1.mk
ATGGGCATTGATTCTGAAACTTGTAATGCACAAATTGTGTGCCAACAAAAAAGAAGAAGGATATCTTCGAACACTGGCATTTCGTTGTGTGAGACATTTAGTCCTCTTGAAGCTTCCTTACCCTATTTACCAACTTTAGAAGAAGCTGATTACTACACACAGCCCTCTTTGAAGGAATTGGCTGCTCGAGAATATACAGATCCTGGTTTTTCTAGTCGAGTTTTGGACTTTACAGTTGGAAGATTCGGTTATGGATCCATCAAATATCTTGGGAAGACTGACATTAGGAGATTGGAATTAGATAAAATTGTGAAGTTCCGCAGACATGAGGTTATTGTATATGAAGATGAAACTGCCAAACCTTTGGTTGGCCAAGGCCTTAACAAGCCTGCTGAAGTCACTTTAGTGCTACAAACAAGACCATCAAATATGGAAAAGAGACAGAGAGATAATAGTGTGAAAAAATTGAGGCAGATTGCGGAGAGACAAGGAGCTCAGTTTATTTCGTTTAATCCAGAAAATGGGGAATGGAAATTTTTTGTTCACCATTTCAGCAGATTTGGATTGAGTGAAGATGATGAAGAAGACATCATGATGGAAGATGCTGCTGCAGCTCAAGATCTTGTAGAAATGAACCATGGTGAGATTTCTGATGCTGATGAAGAAACCCAAATGGATCCCACTGGAATTGTGCTTTCGCATTCTCTTCCTGCTCATCTTGGGCTTGACCCTGTAAAGATGAAAGAAATGAGAATGTTGATGTTTCCTGATGGGGAAGAGGAAGCTGAGGAGTTGAATCAAGTACCTGCACATTATAATCCATCCTTTGGTAGAGAATACATAAGACCTCCTTTACAAAATACTTCTCAGAGGATGAGTGATAGATCTACTCCACCACCTGTTCGAAAAACCCCATTGGCATTGCTCGAGTATAAGCATGGTAGTTTTGACTCAAACTCTCCTGGGGCCATTCTAATGGCCCAAGAAAATAAGGTCATGCCTCCAAAGATACTAAAAGAAGGTTTTAAGCTTGATCTCAAGCATGAAACACCAGTAACTAAAAGACATTGTCGCAACATAGTTGATGCAGGTCTGTTGATGGGTAGGTCATTTCGAGTAGGATGGGGTCCTAATGGAACCCTAGTCCATGCTGGAACACCTGTAGGGAGTACTGGTTCTCAAATGATGTTATCATCCACAATCAATTTAGAGAAGGTTGCTATTGACAATGTTGTTAGGGATGAAAATAACAAAGTTAGAGAGGAACTTATTGACATGGCTATTGATTCTCCACTAGATTTTCACATGGGATTACTTCATCAGACAGAAGAGATTGAAGTTGGATCCTTTAACCTAAGGCTGCAGAAGGTTGTCTCTAATCGCTTGATGCTATCAGAGATTTGCAGGAGCTATGTAGAGATCATTGAGAAGCAGCTGGAAGTTCCTAGGCTATCTTCCTCTTCTCGTTTGGTTTTGACACACCAAGTAATGATTTGGGAACTGATAAAAGTTCTTTTTTCTGATAGGGAAAATGGTGGGAAAATGAAATCTTTGGGTGCTGATAATGAGGAAGAAATGGTGCAGGATGTGAAGGAAGCTTCTCAAGAAGTCGACCTGGAAGCATTACCTCTTATTCGGAGGGCAGAGTTTAGTTATTGGTTGCAAGAGAATGTATGCCATCGAGTACAAGAAAAAATGAGCTCCTTGAATGAGTCCAGTTATCTGGAATACATATTATTACTTCTGAGTGGGCGCCAACTGGATGCAGCTGTTGAACTGGCTGCTTCTCGGGGAGATGTGAGATTGGCTTGTTTGTTAAGTCAGGCTGGAGGGTCCATAGTCAATCGTTCCGACATGGCTCAACAGCTTGATCGTTGGAGGATCAATGGGCTGGATTTCAGTTTCATTGAGAAAGACAGGATAAGGCTTTATGAGTTGCTTGCTGGTAATATCAACAGTGCTTTTCACGATGTTAAAGTTGATTGGAAGAGGTTTCTAGGGTTATTGATGTGGTATCAATTAGCACCTAGCACCTCATTGCCCACTGTTTTTCGCACTTATCAACATCTTCTTCACGAGGGTAAGGCTCCATACCCTGTTCCGATTTACATTGATGAAGGACTGGTAGAAGAGTCTGAGAATTTTAGTGCGGTAAAACGTTGTGACCTATCATATTATCTTATGCTGCTACATGCCAGTGAAGAAAGTGAAGTTGGCTTTCTAAAGAGCATGCTCAGTGCCTTTTCATCAACACATGATCCGCTTGATTTCCATATGATCTGGCATCAGCGTGCAGTGTTGGAAGCAGTTGGGGCTATCAGCTCTAAGGATCTTCATGTTCTTGACATGGGATTTGTTTCCCAGCTGTTGTGTCTTGGGAAATGTCATTGGGCCATCTATGTGGTCCTTCACATGCCCCATTGTGAAGATTTTCCATATGTCCATGCTAATCTTATTCGGGAAATCTTGTTCCAATATTGTGAATCCTGGAGTTCTCAAGAATCACAACGCCAAGCCATTGAGAACTTGGGTATTCCTAAGGCATGGCTTCATGAGGCTATGGCTGTTTATTTCAATTACTACGGGGATCTTGCAAAGGCCCTTGAACACTTTCTTCAATGTGCAAATTGGCAGAAAGCACATACTATTTTCGTAACTTCTGTTGCCCACAAATTATTCTTGTCTGCCGAACACTCAGAGATATGGAGGCTTGCAACTTCCATGGAGGACCACAAATTAGAAATTGAAAATTGGGACCTGGGAGCTGGGATTTATATTTCATTCTATCTAATTAGAAGTTCATTGCAGGAAGCGGACAATACCATGAACAAACTGGATTCTCTTGAAAGCAAAAATTTTGCATGTAGAGAGTTCCTTGGTCAGTTAAAGCAGTCTTTGGCTGTTTGGGGTGTCCAGCTACCCGTTGACGTGAGGGTAGTGTATTCAAAGATGGCAGATGAGATATGCAATTTGCTTTTATCTGATATTGGAGATGGCCCAACACGAGATATTCAATTAAGTTGTTTTGACACCGTTTTTAGTGCTCCCATTCCTGAAGACCTTCGCGCAAGTCATTTGCAAGATGCACTGTCTCTCTTTACATGCTTTCTTTCAGAGGTTGCTACATAG
Protein Sequence
- >Pav_sc0000663.1_g240.1.mk
MGIDSETCNAQIVCQQKRRRISSNTGISLCETFSPLEASLPYLPTLEEADYYTQPSLKELAAREYTDPGFSSRVLDFTVGRFGYGSIKYLGKTDIRRLELDKIVKFRRHEVIVYEDETAKPLVGQGLNKPAEVTLVLQTRPSNMEKRQRDNSVKKLRQIAERQGAQFISFNPENGEWKFFVHHFSRFGLSEDDEEDIMMEDAAAAQDLVEMNHGEISDADEETQMDPTGIVLSHSLPAHLGLDPVKMKEMRMLMFPDGEEEAEELNQVPAHYNPSFGREYIRPPLQNTSQRMSDRSTPPPVRKTPLALLEYKHGSFDSNSPGAILMAQENKVMPPKILKEGFKLDLKHETPVTKRHCRNIVDAGLLMGRSFRVGWGPNGTLVHAGTPVGSTGSQMMLSSTINLEKVAIDNVVRDENNKVREELIDMAIDSPLDFHMGLLHQTEEIEVGSFNLRLQKVVSNRLMLSEICRSYVEIIEKQLEVPRLSSSSRLVLTHQVMIWELIKVLFSDRENGGKMKSLGADNEEEMVQDVKEASQEVDLEALPLIRRAEFSYWLQENVCHRVQEKMSSLNESSYLEYILLLLSGRQLDAAVELAASRGDVRLACLLSQAGGSIVNRSDMAQQLDRWRINGLDFSFIEKDRIRLYELLAGNINSAFHDVKVDWKRFLGLLMWYQLAPSTSLPTVFRTYQHLLHEGKAPYPVPIYIDEGLVEESENFSAVKRCDLSYYLMLLHASEESEVGFLKSMLSAFSSTHDPLDFHMIWHQRAVLEAVGAISSKDLHVLDMGFVSQLLCLGKCHWAIYVVLHMPHCEDFPYVHANLIREILFQYCESWSSQESQRQAIENLGIPKAWLHEAMAVYFNYYGDLAKALEHFLQCANWQKAHTIFVTSVAHKLFLSAEHSEIWRLATSMEDHKLEIENWDLGAGIYISFYLIRSSLQEADNTMNKLDSLESKNFACREFLGQLKQSLAVWGVQLPVDVRVVYSKMADEICNLLLSDIGDGPTRDIQLSCFDTVFSAPIPEDLRASHLQDALSLFTCFLSEVAT