Information report for Pav_sc0000131.1_g350.1.mk
Gene Details
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Functional Annotation
- Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.
Homologous
- Arabidopsis thaliana — AT3G43920
Gene Resources
- Pfam: PF00270 PF00271 PF02170 PF00636
- UniProt: A0A6P5RU66
- RefSeq: XP_021805263.1
- KEGG: pavi:110749456
- InterPro: IPR000999 , IPR001650 , IPR003100 , IPR005034 , IPR011545 , IPR014001 , IPR014720 , IPR027417 , IPR036085 , IPR036389 , IPR038248
- PANTHER: PTHR14950 , PTHR14950:SF46
- SUPFAM: SSF101690 , SSF52540 , SSF54768 , SSF69065
- PROSITE: PS00517 , PS50137 , PS50142 , PS50821 , PS51192 , PS51194 , PS51327
- Gene3D: 1.10.1520.10 , 2.170.260.10 , 3.30.160.20 , 3.30.160.380 , 3.40.50.300
- CDD: cd00593 , cd18034
Sequences
CDS Sequence
- >Pav_sc0000131.1_g350.1.mk
ATGGCCTCTGAACCGCTTGATCATGTCGCTGATCAGGATCAACAATCATCCCCGATTTCCAATGACTTCAACCCCAGCGGGTATGAGGCAAATGTTTATGAGGTTGCGAAGAGGAGGAACACCATAGCAGTGGTGGAGACAGGTTCTGGGAAGGATATGGTAGCTGCGATGCTCATCAGTGACATTGGTCAAGCTATCAAGTCAAGTGGTGCCCAAAAATTGATTGTATTTTTGGCTCCAACTGTTCATTTAGTTCATCAGCAATTTGAGGTCGTTAAAGTAAACACAAACTTTAAAGTGGAAGAGTATTACGGAGCTAAGGGGGTTGATTCATGGACTATGGAGTGCTGGGAAAAGGAAACAAATGAGCATGATGTGCTAGTAATGACACCCCAGATTCTTTTGGATGCCTTGAAAAAGGCATTCTTGAGCTTGGAAGCGGTATGCTTGATGATTATTGATGAGTGCCATCTAGCTACTGGAAAGCATCCATATACAAAGATAATGAAGGAATTTTATTACAAGTCTACTAACAAGCCAAAGATTTTTGGGATGACGGCATCACCTGTTATCAGAAAAGGTGTCTCATCTTCATCAGATTGCATGGGCCAGATATCAGAACTTGAAAGCACTTTGGATTCCCAGCTTTATACTATGGAGGACAGAAAAGAGAAGGAACTGTATGTCCCATCTGCAAAAGAAACTTGTATATTTTATGACCAAGCATGGTTTCCGAGTTCGGATTTAAAAGAAAAGATGGAAGCCTCGTGGGCCAAGATTGGTGCTTCATTGTCAAAGTTGCAAGAATCAGTAGAAAGTAATTTCAAAGACATGGATGATACAATGAAGACACTGCGGAAACGATTGTCTGATGACTACGCAAATATCTTGTATTGCCTTGACAACCTTGGTCTCATATGCACTTATGAGGCTGTTAAGGTCTGTCTGGATAATGCTCCTTGCAAAGAGGAGTATGAACTTTATAGAGAAAGCTCTTCTCAGTGCAGATATTTTCTTGAGGAAGTGCTTGGTATAATAAGGGAATCGTTTCTGCATGGTGGTGAAATTTTTTTGGATTTTGGGTTTGACTATTTGAAGGCGGTAAATTTGGGCTACATATCTCCGAAATTAAATGAACTTGTTCAACTTTTTCACTCATTTGGAGGATCTAGGGAAGAACTGTGCCTTATACTTGTTGATAGGATTATCACAGCTAAAGTGATTGGCAGATTCATGAAAAAAGTTACCTCTTTATGTCATTTCACGGTTTCCTATTTTACTGGAACTAATACGTCAGTTGATGGTCTGGCCCCAAAAATACAAAAGGAGACATTGGAATTATTCTGCTCTGGGGAGGTCAATTTATTATTCGCTACTGATGTAGTTGAGGAGGGAATTCATTTTCCGAACTGCTCCTGTGTGGTACGTTATGACCTGCCAAAGACAGTCCGTAGTTATGTCCAGTCCAGGGGACAGGCCCGGCAAAATAACTCTCAATTCGTCACAATGCTGGAGAGGGGAAACAAGAAACAAAGGGATCAACTATATGAGATTGTCAGGAGAGAATATTTGATGACAGATTCAGCTACAAATAGAGATCCCGAAACATGCGTTTTGAAAGTATGTACTATGGAGGAGAGAAATGCATATACTGTGGATGCCACCGGAGCATCAGTCACAGCAGATTCTAGTGTCAGTCTTGTACAAAAATATTGTGAAACGCTACCTGGGGATAAGAACTTCATTCCGAGGCCAACTTTTCACTACTCATATCTTGGAGACTCTTACGAGTGTACAATTGAATTTCCTCCACATGCGGCTTTCCAAACAATAGTTGGTCCTGTATGCAAGAAGTCTTCTGTATCAAAGCAGCTTGTATGCTTGGAAGCATGTAAGCTGTTACATCAAATGGGTGCCCTGAATGATCATCTTCTTCCAGCCATTGACGAGCCTCCAGAAAATGATCTCGATGTGAAAAGGAAAGATCCAGCTTCTGGTGCAGGAACAACTAAAAGGAAGGAATTACATGGTACAACTTGCATTCATACACTATCTGGAACTTGGGGAGGAAAACTTGATGGTGCCGTTTTTCAGGCTTATAAATTTGACTTCTCCTGTGAAATTGTTAGCGAATTTTATTCTGGATTTACTCTTCTGATTGAGTCAAAGCTTGCTGATGATGTGGGGAATATTGAATTGGAACTTTACCTGATTTCGAAGACAGTTAAGTCTTCTGTTTCTTCCTGTGGGCAAGTTCATTTGGACGGGGAACAGATGGCAAAAGCAATGTGCTTTCAAGAATTTTTCTGTAATGGATTGTTTGGGAGATTGTTTCATGGAACCAAATCAGCTGGAAATCGGAGAGAATTTTTACTTGAGAAAGAAACAAGAAATCTGTGGAGCCCATCATACATGTATTTGCTTCTTCCACTTGAGTCATTGAATGATTCAAGTAAAGGAACTTGGAGAATAAATTGGACAGGGATAAATTCTTGTGTTTCTGCAGTAGAATTCTTGAAGAAAAACTCTTCTTTGGGTAGTCATCATTGTTATGGTGACACACGTAATTTCTTGCCGAGTAGAACTGTCTCAGCTGAGACTAAATGCAACATTGCAGAGATAGTCCACTTTGCTAATTGTTCTGTTAATGTAGCAAATCTCGAAGACATGGTGGTGGTGGCTATCCACACTGGAAGAATTTACTCCGTTGCTGAGGTTCTGAGTAACACATCTGCTGAGAGTCCTTTTGATGGAAAAAAAGACAATGTCCCCTCAAAATATAGTACATTTTCTGAGTACTTCAACAATAAGTATGGGATTGTACTCCAGTATCCGGGGCAGCCTCTGTTGCGATTGAAGCAAAGTCACAATCCACACAACCTTCTTGTGAACTTTAGTGGTGAAGGTGGTGGTGGTATTGAAAGGCAACGCATGTATGCTCAAATGCCACCTGAGCTTCTAGTCAGTATTGGTGTCCAAAGATACGTTTTAAAGTCCTTTTATTTAATGCCATCATTGATTCACCGTTTGGAATCCTTAATGCTAGCGAGCCAACTTAGAGAAGATATCGATTGTCATTCTAGCAGCTTTCAGATATCAAGCTCATTGATTCTAGAAGCACTTACAACACTCAGATGCAATGAAGATTTTTCTATGGAGCGCTTGGAATTGCTTGGGGATTCAGTTTTAAAGTATGCTGTGAGCTGCCACCTCTTTCTCAAATATCCCAAAAAACATGAAGGACAATTATCTAATTTGCGCCAGTGGGCTATTTGTAACTCAAACCTACATAAATTGGGAATAAATCGCAAATTACAGGGATATATACGGGATGGTGCGTTTGATCCACGTCGTTGGGTTGCTCCAGGACAGATTTCTCTGCGACCAGCTCCTTGTAATTGTGGAGTAGATACTTTAGAAGTCCCAGTAGATAGCAAATTCCAAACTGAAGATCCCAAAGTTGTGGTTGGAAAGTCCTGTGATAAGGGTCATAGATGGATGTGTTCAAAAACAATCTCTGATTGTGTTGAAGCCCTTATAGGAGCATACTATGTTAGTGGTGGATTGCCTGCTGCACTTCATCTGATGAAGTGGTTCCATATTGATGCAGAACTTGAGCCCTCTCTGGTTGCTGAAGCAATTACTACTGCATCTCTTCGTTCTTACAACCCAAAAGCTAATGAGATTGCAATTTTGGAGTCAAAGCTTCATTATGAATTTTCTACCAAGGGTCTCTTACACGAGGCCATAACACATGCATCTGAGCAAGAATCAGGAGTTGGCTGCTGTTATGAGAGACTAGAATTTCTAGGGGATTCTGTGTTGGACCTGCTTATCACAAGGCATCTCTATGATAGCCACACAGATATTGATCCAGGCGAGTTAACTGACTTACGTTCAGCTTCTGTTAATAATGAAAATTTTGCTCAAGTTGCTGTTAGACAAAACCTTCAGCAGCATCTACAACATTCCTCTGGGTTACTTCTAAGCCAAATAACAGAATATGTGAAGTCTCTTTCTGAACCTGACAATGGTACCACACTTCAAGGCACAAAAGGTCCTAAGGCTCTTGGAGACATGGTGGAAAGTATTGCAGGGGCAATACTAATTGATACCGAACTTAATCTTGATGAAGTGTGGAGAATATTTAAACCATTATTATCTCCAATTGTGACCCCTGACAAGCTTGAGCTGCCTCCACTGCGTGAACTGATTGAATTATGTGACTCACTTGGGTACTTTATAAAAGAAACGTGTACAAAGAAGGGTGAAACAGTTCATGCGAAGCTTACTGTACAGCTGAAGGATGTTCTATTGATTGGAGAGGGGTGCGATCGGACTAAAAAAGCTGCAAAAGGGGAAGCAGCTCGACGTTTACTGAAGGAACTTGAGAAAAGAGATATTTCATACTCCTGGTGTTCCAAGAAGAGAAAATTGGGCTCTGAAGGAGTAGGTGATTCTTTTCTCCTTGACATCAACTATAACGTCTGCAGCCAAGTAAATGTTGAAGATTCTTCAGAGCGAGTAATCTATAAAAAGAAAAGGACAACTGAGAGAATTGGAGTTTTTCCGGCAGTCAATGAACCGAAAACCTCTAGTCCCAACGATACCGCACCGGTTATTAAATCAATCAACATGAAGAAAGGAGGACCTCGAACATCTTTTTATGATCTGTGCAAGAAACAACAGTGGAAAAGGCCCGACTTTGAATCATCAGAAACTAAGTCAAGAACTCCAATTGACTTTGGTGAAGGCTCAAGTGCGCATTTTAGCAGTTTTGTCTCAAAGATAACGTTGCACATACCCAACTTCGGCGACATTGAATGCACAGGAGATGCTAGACCTGATAAAAAAAGTTCAGAAGATTCTGCAGCACTTGCCATGCTTTATGAGCTTGAGCGGCAAGGCAAACTTATCATTGGTGGATGA
Protein Sequence
- >Pav_sc0000131.1_g350.1.mk
MASEPLDHVADQDQQSSPISNDFNPSGYEANVYEVAKRRNTIAVVETGSGKDMVAAMLISDIGQAIKSSGAQKLIVFLAPTVHLVHQQFEVVKVNTNFKVEEYYGAKGVDSWTMECWEKETNEHDVLVMTPQILLDALKKAFLSLEAVCLMIIDECHLATGKHPYTKIMKEFYYKSTNKPKIFGMTASPVIRKGVSSSSDCMGQISELESTLDSQLYTMEDRKEKELYVPSAKETCIFYDQAWFPSSDLKEKMEASWAKIGASLSKLQESVESNFKDMDDTMKTLRKRLSDDYANILYCLDNLGLICTYEAVKVCLDNAPCKEEYELYRESSSQCRYFLEEVLGIIRESFLHGGEIFLDFGFDYLKAVNLGYISPKLNELVQLFHSFGGSREELCLILVDRIITAKVIGRFMKKVTSLCHFTVSYFTGTNTSVDGLAPKIQKETLELFCSGEVNLLFATDVVEEGIHFPNCSCVVRYDLPKTVRSYVQSRGQARQNNSQFVTMLERGNKKQRDQLYEIVRREYLMTDSATNRDPETCVLKVCTMEERNAYTVDATGASVTADSSVSLVQKYCETLPGDKNFIPRPTFHYSYLGDSYECTIEFPPHAAFQTIVGPVCKKSSVSKQLVCLEACKLLHQMGALNDHLLPAIDEPPENDLDVKRKDPASGAGTTKRKELHGTTCIHTLSGTWGGKLDGAVFQAYKFDFSCEIVSEFYSGFTLLIESKLADDVGNIELELYLISKTVKSSVSSCGQVHLDGEQMAKAMCFQEFFCNGLFGRLFHGTKSAGNRREFLLEKETRNLWSPSYMYLLLPLESLNDSSKGTWRINWTGINSCVSAVEFLKKNSSLGSHHCYGDTRNFLPSRTVSAETKCNIAEIVHFANCSVNVANLEDMVVVAIHTGRIYSVAEVLSNTSAESPFDGKKDNVPSKYSTFSEYFNNKYGIVLQYPGQPLLRLKQSHNPHNLLVNFSGEGGGGIERQRMYAQMPPELLVSIGVQRYVLKSFYLMPSLIHRLESLMLASQLREDIDCHSSSFQISSSLILEALTTLRCNEDFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSNLRQWAICNSNLHKLGINRKLQGYIRDGAFDPRRWVAPGQISLRPAPCNCGVDTLEVPVDSKFQTEDPKVVVGKSCDKGHRWMCSKTISDCVEALIGAYYVSGGLPAALHLMKWFHIDAELEPSLVAEAITTASLRSYNPKANEIAILESKLHYEFSTKGLLHEAITHASEQESGVGCCYERLEFLGDSVLDLLITRHLYDSHTDIDPGELTDLRSASVNNENFAQVAVRQNLQQHLQHSSGLLLSQITEYVKSLSEPDNGTTLQGTKGPKALGDMVESIAGAILIDTELNLDEVWRIFKPLLSPIVTPDKLELPPLRELIELCDSLGYFIKETCTKKGETVHAKLTVQLKDVLLIGEGCDRTKKAAKGEAARRLLKELEKRDISYSWCSKKRKLGSEGVGDSFLLDINYNVCSQVNVEDSSERVIYKKKRTTERIGVFPAVNEPKTSSPNDTAPVIKSINMKKGGPRTSFYDLCKKQQWKRPDFESSETKSRTPIDFGEGSSAHFSSFVSKITLHIPNFGDIECTGDARPDKKSSEDSAALAMLYELERQGKLIIGG