Information report for Oeu045488
Gene Details
Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Actinidia chinensis: CEY00_Acc18068, Achn375731
- Beta vulgaris: Bv_008490_cjwm.t1
- Fragaria vesca: mrna09903.1-v1.0-hybrid
- Juglans regia: Jr02_01930, WALNUT_00020075-RA, Jr09_04290
- Malus domestica: MDP0000298212
- Prunus avium: Pav_sc0000522.1_g100.1.mk
- Prunus mume: XP_008239384.1
- Prunus persica: Prupe.5G159200.1.p, PRUPE_5G159200
- Pyrus bretschneideri: Pbr036965.1
- Rosa chinensis: RchiOBHm_Chr7g0191461
- Sesamum indicum: XP_011072922.1, SIN_1017396, XP_011072923.1
- Ziziphus jujuba: XP_015882347.1
Sequences
CDS Sequence
- >Oeu045488
ATGGCTGGCCTAGAAGCAAGCGGTGGGAATATTAAGGTATTTCCATGGCTAAAGTCTTTGCCAGTAGCTCCAGAGTACCACCCAACCCTAGCTGAGTTCCAAGATCCGATTGCTTACATTTTCAAGATTGAAAAGGAAGCCTCCAAATATGGGATTTGCAAAATAGTTCCTCCTGTGCTCGCACCGTCTAAGAAGACTGTCATTGCTAATTTGAACAGGTCACTTTTGGCCCTGTCCAATGATTTGAACCCCGCGCCGACTTTCACCACTCGGCAGCAGCAGATCGGATTCTGCCCGAGGAAGCACCGACCGGTGCAGAAACCCGTCTGGCAGAGTGGGGAGAATTACACTGTTTTAGAATTCGAGGCGATGGCCAAGAATTTTGAGAAGAGCTATTTGAAGAAGTATGGGAAGAAAGGGCTGAATGCGTTGGAAGTTGAGACCCTTTATTGGAAGGCAACTGTGGACAAGCCCTTTTCAGTGGAGTACGCAAATGACATGCCCGGGTCTGCATTTGTAGTGAAGAAGGTTGGTGGGAAGGGGATTGAGGACCCATTGACGGTGGGGGAGACGGAGTGGAATATGAGGGGGGTTTCAAGGTCGAAAAGCTCCTTGTTAAGGTTCATGAAGGAGGAAATTCCCGGGGTAACTTCACCCATGGTGTACATTGCTATGATGTTTAGTTGGTTTGCTTGGCATGTGGAAGATCATGACCTTCATAGTTTGAATTATATGCACATTGGTGCGGGAAAGACATGGTATGGTGTGCCTAGGGAGGTGGCTGTCGCATTTGAGGAGGTGATCCGGGTGCAGGGATATGGCGGAGAGATAAATCCTCTTGTTACTTTTGCTACACTTGCTGAGAAGAACACAGTCATGTCACCTGAAGTACTTGTTAATGCCGGTGTTCCATGCTGCAGGTTGGTGCAAAATGCTGGAGAATTTGTTGTCACTTTCCCAAGAGCCTATCACTCAGGGTTTAGTCATGGATTTAATTGTGGAGAGGCAGCTAACATTGCTACTCCTGAATGGTTGAGGATTGCAAATGATGCTGCTGTTCGTAGGGCATCAATTAATTGTTCTCCAATGGTGTCTCACTTCCAGTTACTGTATGACCTGGCACTTTCATTATGTTCAAGCTTATCAAAGAGCATTTGTGTGGAACCACGGAGTTCCCGGTTAAAGGATAAAAAGAAAAGTGAAGGAGAAATATTGATCAAAGAGCTATTTTCGCAGGATGTGATGCTGAACAACAATACACTTCATATTCTTGGAAAAGGATCTGCCGTTGTAGTTCTTCCTCAAAATTCTTTAAGCAGTTCAAATTTACAACGTGGAACCCTGTCAGCAACCAGATCTAGATTGTTCTCCAGATTTTGCAGTCCTGATCTCGAGTTTAAAGTTACAAAAAGTATTGTTTGTGAGGATGTCACGTTGGACAGGAACCAAGAAGTGGGGGAAGTGAGAGGCTATCCAGTAAAAGGGAAAGTTTATTCTTTGTGCAATGGTAGCGAGTTTCCCTCTTTAGCTCCTCAGACAGGAAATGCTGACTCTGATGTAAAACGAGCTTCCCAATTTGATAGATTGTCAGATAAGGGACTATTTTCATGTATCACTTGTGGTATTTTGTGCTTTGCCTGTTTTGCGATAGTTCAACCGACAGAAGCTGCTGCTAGTTATCTAATGTCAGCTGATTGTAGTATCTTCAATGATTGGGAAGCAGCTGGCAATGGCTACAACCTCTGCACTGGAGATGTAATGAATCCCCATTCAGGATCTGTTCTTAAAAGGACACCACGCGGACTATTTGATGTCCCAGTAGGTTCTGCTGCTCAAATTGGAATGGTAAATGATGATAGAGCGATGGTTGTTTCAAATAGTAAAACACAAAAGGATACCTCTGCCCTCGGCCTATTGGCTCTGATGTATGATGATTCCTCCGACTTTGAGGAGGAAGAGGTTGAATTACATATTCCTGTCAAAGACCCCGAAACTAAAGGAAGTGATTGCACTGAAGGTGTACACTACAGTAAAAAACTTGGCTATACCCAAATTGACGGTGGGAATGAGGTTCCTATCAAAATTTCCAATTCTTTTGCAAAGCATGGCCCAGTCAGAGAGGAAAATAAGGATATAGTGTATCAAAGTTTAGATTATTCCAATGAGATTGAAATCGACAAGTGTAAATTAGTTGACTCAAATTCTTTAACGCATAGTTTTAGAAATTTAACAAAATTACAGAACAGCACATCGAATTGTAACCCTGTTGCTGGTAAGGAAGAAGAGACAATTAGCACTGCTTTGGTACCATTAGAGAAGACAACTACGTCTTTTGCTTCACGATCTGACAAAGAATCTTCTAGAATGCATGTCTTCTGCCTTCAGCATGCTGTACAAGTAGAACAGCGGCTCAATTCATTTGGAGGAGCACGCATTTTCCTTGTCAGTCATCCAGACTATCCCAAATTAGAATCTCAAGCAAAAAAGGTGGCAGAAGAATTGAAAATTGATCATCTCTGGAATGATACGCCATTCAGGGAGGCTACAGAAGAGGACAAGGAAATGATACGATTAGCTTTAGATAGCGAAGATGCTATCCATGGCAATGGAGACTGGGCTGTGAAACTTGGCATCAATCTCTGCTACAGTGCTAATCTTAGCCGATCTCCTCTCTACAGTAAGCAGATGCCATACAATGCAGTTGTATATAATGCATTTGGATGTCGTTCCCCAGCAGACACTCGGGAAAATGATGGAAATGGTTCAGGTAAGCAGAAAAGGTTTGCTGTTGCTGGAAAATGGTGTGGTAAAGTCTGGATGTCGAGTCAGGTTCACCCGTTGTTAACTAAGAAGGATTTCAACGAACAAGATCCTACTTGGGTCGAGCCGGATGTGAAGGTCAGGAGACCATTGGATGCCACCCGAACTGCTGAAGCAGCTTCTACAAGTTGCAGAACTAGTAGAAAGAGGAAGCGTCGACCAGGAAATAGGTCAGCCATGAAAGCAAAATCTCCGAAGGCTGAAAGTTCAGAGGAATCTTCTGAAGATTCTTTAATCTGGAACTCTCTTAAGCAAGTTAGGAGTATGCTTGGAAACAAAAGAATGAAAAAAGAGACTCACGAACCTCAGAATAAAGGTGAGAGAAGCAAGAGAAGTTTTGAAGCGCTAACTGAAGACGAGGTGGAAGAATCTCCAATCAGGAATTCTATTAGGCACCAAGTCAAGAGTAAGCTTAGAAACAAGCGAACTGAGAAAGAGAATCCAGAGCCTCAGAATAAACAAGAGAGAAGCAAGAAACATTTTGACACACTCACTGAAGCCGAGGTGGAGGAACCTGTCGGGAACTCTCATAAGCAACTTAAGAGTAAGCTTGGAAGCAAGAGAGTGAAGAAAGACAATTCCATGCCTCAGAATACTCGGGAGAGAACCAAGAAACATATTGACCTACTCAATGAAGACGAGGTGGAAGAATCTCCAATCAGGAACTCTCGTAAGCAAGTCAAGAGCAAGCTTGAAAATAAGAAAACTAAGAAAGCGACTCCTGAGCCTCAGAATACTCGTGAGAATAACAAGAAACAGTCCAACTCATTTATTGAAAGCGAGCTGGAAGGTTGGCCGGGTACACGACTAAGACGAAGAACTTCAATCCCGTGTAAAGATTCAGGACTCAAATCAGCTAAAGCGAGACCCATACCGAAGATGCTGCATAAAAACATGATAATGAAGAAAAGTCAAGCCATGAAGGTTCCGTCTAGTAGTAACAATGCAAAAATAAGGGACGAGGAAATGGAGTACCCGTGTAACATGGATGGCTGCATTATGAGTTTTGGCTCGAAACAGGAGCTTATGTTGCACAAACGGAATATTTGTCCAGTCAAGGGATGCGGGAAAAAGTTGTTCTCACACAAGTATCTGGTGCAGCATCAACGGGTTCACACGGATGATCGCCCCCTGAAATGCCCGTGGAAAGGCTGCAAGATGACGTTTAAGTGGGCATGGGCTCGGACCGAGCACATAAGAGTTCACACGGGCGTTCGTCCTTATGTTTGCACTGAGGCGGGATGTGGCCAGACGTTTCGGTTTGTGTCAGATTTCAGTCGACACAAGCGCAAGACCGGTCATTCTTCGAAGAAATCTAAAGGATAA
Protein Sequence
- >Oeu045488
MAGLEASGGNIKVFPWLKSLPVAPEYHPTLAEFQDPIAYIFKIEKEASKYGICKIVPPVLAPSKKTVIANLNRSLLALSNDLNPAPTFTTRQQQIGFCPRKHRPVQKPVWQSGENYTVLEFEAMAKNFEKSYLKKYGKKGLNALEVETLYWKATVDKPFSVEYANDMPGSAFVVKKVGGKGIEDPLTVGETEWNMRGVSRSKSSLLRFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYMHIGAGKTWYGVPREVAVAFEEVIRVQGYGGEINPLVTFATLAEKNTVMSPEVLVNAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRIANDAAVRRASINCSPMVSHFQLLYDLALSLCSSLSKSICVEPRSSRLKDKKKSEGEILIKELFSQDVMLNNNTLHILGKGSAVVVLPQNSLSSSNLQRGTLSATRSRLFSRFCSPDLEFKVTKSIVCEDVTLDRNQEVGEVRGYPVKGKVYSLCNGSEFPSLAPQTGNADSDVKRASQFDRLSDKGLFSCITCGILCFACFAIVQPTEAAASYLMSADCSIFNDWEAAGNGYNLCTGDVMNPHSGSVLKRTPRGLFDVPVGSAAQIGMVNDDRAMVVSNSKTQKDTSALGLLALMYDDSSDFEEEEVELHIPVKDPETKGSDCTEGVHYSKKLGYTQIDGGNEVPIKISNSFAKHGPVREENKDIVYQSLDYSNEIEIDKCKLVDSNSLTHSFRNLTKLQNSTSNCNPVAGKEEETISTALVPLEKTTTSFASRSDKESSRMHVFCLQHAVQVEQRLNSFGGARIFLVSHPDYPKLESQAKKVAEELKIDHLWNDTPFREATEEDKEMIRLALDSEDAIHGNGDWAVKLGINLCYSANLSRSPLYSKQMPYNAVVYNAFGCRSPADTRENDGNGSGKQKRFAVAGKWCGKVWMSSQVHPLLTKKDFNEQDPTWVEPDVKVRRPLDATRTAEAASTSCRTSRKRKRRPGNRSAMKAKSPKAESSEESSEDSLIWNSLKQVRSMLGNKRMKKETHEPQNKGERSKRSFEALTEDEVEESPIRNSIRHQVKSKLRNKRTEKENPEPQNKQERSKKHFDTLTEAEVEEPVGNSHKQLKSKLGSKRVKKDNSMPQNTRERTKKHIDLLNEDEVEESPIRNSRKQVKSKLENKKTKKATPEPQNTRENNKKQSNSFIESELEGWPGTRLRRRTSIPCKDSGLKSAKARPIPKMLHKNMIMKKSQAMKVPSSSNNAKIRDEEMEYPCNMDGCIMSFGSKQELMLHKRNICPVKGCGKKLFSHKYLVQHQRVHTDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGVRPYVCTEAGCGQTFRFVSDFSRHKRKTGHSSKKSKG