Information report for Oeu034944
Gene Details
Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Brassica napus: BnaA10G0008800ZS
- Brassica rapa: Bra033293
- Capsicum annuum: T459_25176
- Glycine max: Glyma.19G261200, Glyma.03G262100
- Gossypium hirsutum: Gohir.D07G138400, Gohir.A07G133700
- Juglans regia: Jr07_10040
- Lactuca sativa: gene-LSAT_3X140760
- Manihot esculenta: MANES_05G015200
- Nicotiana attenuata: A4A49_02244
- Sesamum indicum: SIN_1002242
- Solanum lycopersicum: Solyc10g005130.3
- Solanum tuberosum: PGSC0003DMG400011259
- Vitis vinifera: VIT_15s0048g02380
Gene Resources
- Pfam: PF00271 PF02170 PF04851 PF00636
- UniProt: A0A8S0TKV8
- EMBL: CACTIH010007261
- InterPro: IPR000999 , IPR001650 , IPR003100 , IPR005034 , IPR011545 , IPR011907 , IPR014001 , IPR014720 , IPR027417 , IPR036085 , IPR036389 , IPR038248
- PANTHER: PTHR14950 , PTHR14950:SF37
- SUPFAM: SSF101690 , SSF52540 , SSF54768 , SSF69065
- PROSITE: PS00517 , PS50137 , PS50142 , PS50821 , PS51192 , PS51194 , PS51327
- Gene3D: 1.10.1520.10 , 2.170.260.10 , 3.30.160.20 , 3.30.160.380 , 3.40.50.300
- OrthoDB: A0A8S0TKV8
- CDD: cd00593 , cd18034 , cd18802 , cd19869
Sequences
CDS Sequence
- >Oeu034944
ATGGATGAGGAGTGTAGGGTTTCAACTAATATCGATGCTCCAACTTCCGATGTTAGACCCTCCTACTGGCTGGATGCTTGTGAGGACATCTCCTGTAATGATCTCATCAACGATTTTGATGCAGTTAATCCAGAACCACATAATCAGGATAGCTGCATTGATTCTGGTTTCTTTGGTGGAATAGATCAGATACTTGACAATATCAAAAATGGTGCTGATTTGCCGGAGGTATCCGCTCACTGTAGTTTGGATGAAGTTGATGATCTTCAATTGTCTTCCGAGCAAGTGTACCTCCAGCATCAACACTCAGTTTATAGGTCTGAAATTACTAATTATAATGGCAAGAAACTGCCTTGTCATAGCAATGAATTCAAGTGCAATGGAAATGAAAATGTCAAGAGACCTCGGGAATTTCATGAATCCGAGGAAAGATTTGGCAGAAGGGCTCGCAACAGTGACAAAAAGAGTGAGAGAAGTTGGGATAGGGATCTTGGCAGGAAGAGACCTCGCAGCTGGGATGATGTGGAGGTGGATGGACGGGACAGGGATCAAGTAAGGAGAAGAGAGCGCTTTACTACTGTTAGCAGGAAGGACCGGGATTGCCGGGAAGGAAGGGGTTACTGGGAGAGGGACAAGGAAACTAATGATTTGGTCTTCCGACATGGTTCTTGGGAAGCTTGTCGAAACAGAGATGAGAAAATGCATACTGAGAAAAGCCACAAACATGGTGGAGGCTCAGAAGAGAGGAAACCCGAAGAGCTGAAAGAGAAAATTCCTGAGGAACAAGCTCGCCAGTACCAGTTGGATGTCCTTGAACAGGCAAAAATGAGAAACACTATTGCTTTTCTGGAAACCGGCGCTGGGAAAACGCTTATAGCGGTCCTCCTTATAAAAAGTGTGTATGTTAAACTGCAAAAGCAGAATAAGAAAATGCTGGCTGTCTTTTTGGTTCCTAAAGTTCCACTTGTTTATCAGCAAGCAGAAGTAATCCGTGAACAAACGGGTTATCAAGTCGGTCATTATTGTGGGGAAATGGGTCAAGATTTCTGGGATGCCCGAAGGTGGCAGCGCGAGTTTGAATCAAAACAGGTTTTAGTGATGACGGCTCAAATTCTTTTAAACATACTTAGACACAGTATAGTAAGAATGGATGCCATCAATCTCCTTGTATTGGATGAGTGTCACCATGCTGTGAAGAAACATCCATATTCTTTGGTCATGTCTGAGTTCTATCACACAACACCAAGGGAGAAAAGACCTTCAGTTTTTGGCATGACTGCATCTCCTGTTAACTTGAAGGGCGTTTCTAGCCAAGTGGATTGTGCTGTAAAAATTCGTAATTTGGAAAGTAAACTAGATTCCATAGTTTGTACTATAAAGGATCGTAAGGAGTTGGAGAAACATGTACCGATGCCCTTAGAAATAGTAGTGGAGTATGACAAAGCTGCTAGTTTATGGTCCCTCCATCAACAAATAAAACAATTGGAGCAGGCCGTTGAAGAGGCAGCTCGGTCAAGCTCCAGAAAAAGTAAATGGCAATTTATGGGAGCAAGAGATGCTGGTGCTAAGGAAGAGATGCGCCAAGTTTATGGTGTGTCTGAACGTACAGAAAGTGATGGTGCTGCAAATTTAATTCAAAAACTGAGAGCTATCAACTATGCACTCGGTGAACTGGGACAATGGTGTGCTTATAAGGTGATGACTTGTGGATTTCATGGACTTGTCAACATTGAATTGAATGTCCTGGTTTTAGTGATGACGGCTCAAATTCTTTTAAACATACTTAGACACAGTATAGTAAGAATGGATGCCATCAATCTCCTTGTATTGGATGAGTGTCACCATGCTGTGAAGAAACATCCATATTCTTTGGTCATGTCTGAGTTCTATCACACAACACCAAGGGAGAAAAGACCTTCAGTTTTTGGCATGACTGCATCTCCTGTTAACTTGAAGGGCGTTTCTAGCCAAGTGGATTGTGCTGTAAAAATTCGTAATTTGGAAAGTAAACTAGATTCCATAGTTTGTACTATAAAGGATCGTAAGGAGTTGGAGAAACATGTACCGATGCCCTTAGAAATAGTAGTGGAGTATGACAAAGCTGCTAGTTTATGGTCCCTCCATCAACAAATAAAACAATTGGAGCAGGCCGTTGAAGAGGCAGCTCGGTCAAGCTCCAGAAAAAGTAAATGGCAATTTATGGGAGCAAGAGATGCTGGTGCTAAGGAAGAGATGCGCCAAGTTTATGGTGTGTCTGAACGTACAGAAAGTGATGGTGCTGCAAATTTAATTCAAAAACTGAGAGCTATCAACTATGCACTCGGTGAACTGGGACAATGGTGTGCTTATAAGGTTGCACAAGCATTTTTAACTGCGTTGCAAAATGATGAAAGGGCTAACTACCAACTTGATGTCAAGTTTCAAGAATCGTACCTACATAAAGTTGTCTCACTCTTGCAATGCCATTTATCTGAGGGAGCCATTTCAGAAGAAACTACAAGTGTTGCCAACATTGGTAGTGGTGCTGGAAATGGGACTGAGGAGCTAGAGGAAGGGGAGCTTACTAACAGTCTAGATCCTCCTATGGACTATGATATAAAATGTAATGTGTGTATAATAAACAAGGAAGGGAACAATCTTCCTTTAATAGAGAGATTACAACTACTTGATAAGCTTATAGATTACAATCTAAGGAAAAGCTTTATCACAACAAGCAAGAGATCAGCAATATCACAACAAACTAAATCTATAGTAGAAAAACAAACTATATCTACATCTAGATTTATAGGAATCTTAGAAGATTGTGTTCACAACAAACTTTCCCTAAGAATTAGTTCTATCATGGAGAACTGGATTGTGTGCAATGGAAATTGCAGCTTTATCATCACAAAAGACCTGTATAGTTTCGGATTCGGTTATATAGGAGTTTCTGCTACTTTATACCCAAGTAAACCCGTTTCACCTAATAAGATTGATTTTTGCAACAGGCGCAGATGCTTCTTGGTAGTCAATTCCATTGGTTTGGATTTATCTCGGGAAAAAATACTGCAGGTTTCAGTTTTTTTTTTTTTTTTTGTTGCCAAAAGTGATCTTCATTTGAACTCTCCCCTTGAAGAGAAGTTTTGCTATAAAAAAGGAAAATTTTCACTAGAAAAGTACATTTTTCGGCTCTTGGATCGAATTTGGACTGGAGATGAGTTGGCACATGGACAAACACCGTACAATCAAAAATTTTTAATGGCAATTCTTCTTAATAAGTTGGCCTCTATCAGAAAACACTCGCACTGCTTTTGTTGGACAAATTCTGATTTGTTGGCGCTAGAACAATTGGGAAGAAAAATAAAAATCCTGTTATTTTCCATCATTTTTTTTGTCCATCACATTTTCTTAACTTCCTCGTGTGCCATGCCAGGGGAAGGTGAGACATTTTTCAATGATATAGAAACATATATAAGATATGGAAACATATATAAGGAGTGTTATGAGAGGATACCATCTTGCCCGAATTGTACATTTGCTAAGAGTTTGTATGGGTCAACTGTTGATAGGCGGTCCCTGATAATGGAATTTTTGTTAAATGTTAAAATTAGCTTATTCTTGTCTGATATAGTTGTCTCTGGTGGGGAGCATGTTGATGCGATTATTGGAGCTGCTGTTGCTGATGGAAAAGTGACACCAAAGGTGCAGTCGTTGATTAAAATACTTCTGAGATATGAGCATATGGAGGATTTTCGTGCAATAATCTTTGTTGAACGTGTTGTGGCTGCCTTAGTTCTTCCAAAGGTCAATTGTTTAACAAAAATGACATTTGTATTGCCGTCAATTATGCGTAGGGTAGAGAGCATGTTGCTTGCTGTACAACTTAAGGATATAATTAATTATCCTGTTCCGGCTTCCAAGATTTTGGAAGCATTGACTGCAGCTTCTTGCCAAGAGACTTTCTGCTATGAAAGAGCAGAACTTTTAGGAGATGCTTATTTAAAATGGGTCGTTAGTCGATTTCTTTTTCTGAAATATCCACAGAAACATGAAGGCCAGCTTACTCGGATGAGACAACAAATGGTAAGCAACATGGTACTCTATCAATATGCATTGAACAAGGGGCTTCAGTCATACATCCAGGCAGATCGATTTGCTCCATCTAGATGGGCTGCTCCTGGGGTGCTACCTGTCTTTGATGAGGACACCAAGGAAGCAGGATCCTCATTATTTGAGCAGGATATTGGTCCCCAGGAAGGTGGAGGGGGGAAGGCCCACAATGGTGATGGGTATGAAGAAGATGAAATGGAAGACGGTGAACTTGAGAGTGACTCAAGTTCATATCGTGTACTCTCGAGCAAAACGCTGGCAGATGTTGTGGAAGCTCTAATTGGTGTGTATTATGTTGAAGGTGGAAAGAATGCTGCAAACCACCTTATGAAATGGATTGGGATTGATATAGATTTCAATTTGAAAGAGATAGAGCATGCAATTAAGCCCAGTAATGTCCCTGAAAATATACTTAGGACTGTTGACTTTGATGCATTACAAGGTGCCTTGAACATCAAATTCAATGATCGTGGCTTGTTGGTGGAAGCTATAACTCATGCATCACGTCCTTCTTCTGGAGTGTCTTGTTATCAACGCCTGGAATTTGTTGGTGATGCAGTCTTAGACCATCTTATCACAAGGTACTTGTTCTTCACGTACACAGAACTGCCTCCGGGGCGATTGACTGACTTGCGAGCTGCTGCTGTGAATAATGAGAACTTTGCACGTGTGGCTGTTAAACATAACCTTCATGTACATCTTCGGCATGGATCAACTGCCCTTGAAAAACAGGAAGTGTATTATCAATTTAAACAAAGAAAGAACAAGAAGAAATTGGGCGGCCCGTCTATATGA
Protein Sequence
- >Oeu034944
MDEECRVSTNIDAPTSDVRPSYWLDACEDISCNDLINDFDAVNPEPHNQDSCIDSGFFGGIDQILDNIKNGADLPEVSAHCSLDEVDDLQLSSEQVYLQHQHSVYRSEITNYNGKKLPCHSNEFKCNGNENVKRPREFHESEERFGRRARNSDKKSERSWDRDLGRKRPRSWDDVEVDGRDRDQVRRRERFTTVSRKDRDCREGRGYWERDKETNDLVFRHGSWEACRNRDEKMHTEKSHKHGGGSEERKPEELKEKIPEEQARQYQLDVLEQAKMRNTIAFLETGAGKTLIAVLLIKSVYVKLQKQNKKMLAVFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRHSIVRMDAINLLVLDECHHAVKKHPYSLVMSEFYHTTPREKRPSVFGMTASPVNLKGVSSQVDCAVKIRNLESKLDSIVCTIKDRKELEKHVPMPLEIVVEYDKAASLWSLHQQIKQLEQAVEEAARSSSRKSKWQFMGARDAGAKEEMRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVMTCGFHGLVNIELNVLVLVMTAQILLNILRHSIVRMDAINLLVLDECHHAVKKHPYSLVMSEFYHTTPREKRPSVFGMTASPVNLKGVSSQVDCAVKIRNLESKLDSIVCTIKDRKELEKHVPMPLEIVVEYDKAASLWSLHQQIKQLEQAVEEAARSSSRKSKWQFMGARDAGAKEEMRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQAFLTALQNDERANYQLDVKFQESYLHKVVSLLQCHLSEGAISEETTSVANIGSGAGNGTEELEEGELTNSLDPPMDYDIKCNVCIINKEGNNLPLIERLQLLDKLIDYNLRKSFITTSKRSAISQQTKSIVEKQTISTSRFIGILEDCVHNKLSLRISSIMENWIVCNGNCSFIITKDLYSFGFGYIGVSATLYPSKPVSPNKIDFCNRRRCFLVVNSIGLDLSREKILQVSVFFFFFVAKSDLHLNSPLEEKFCYKKGKFSLEKYIFRLLDRIWTGDELAHGQTPYNQKFLMAILLNKLASIRKHSHCFCWTNSDLLALEQLGRKIKILLFSIIFFVHHIFLTSSCAMPGEGETFFNDIETYIRYGNIYKECYERIPSCPNCTFAKSLYGSTVDRRSLIMEFLLNVKISLFLSDIVVSGGEHVDAIIGAAVADGKVTPKVQSLIKILLRYEHMEDFRAIIFVERVVAALVLPKVNCLTKMTFVLPSIMRRVESMLLAVQLKDIINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKEAGSSLFEQDIGPQEGGGGKAHNGDGYEEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIDIDFNLKEIEHAIKPSNVPENILRTVDFDALQGALNIKFNDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRYLFFTYTELPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSTALEKQEVYYQFKQRKNKKKLGGPSI