Information report for OBART03G05390
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Brachypodium distachyon: BRADI_1g73110v3
- Hordeum vulgare: HORVU4Hr1G075390
- Oryza sativa: LOC_Os03g07580
- Triticum aestivum: TraesCS4D02G287000
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: I1P819
- RefSeq: XP_052147971.1
- AlphaFoldDB: I1P819
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- eggNOG: KOG0845
- STRING: 4538.I1P819
- HOGENOM: CLU_012427_0_0_1
Sequences
CDS Sequence
- >OBART03G05390
ATGTCTTCCGACCCGGTGTTCCCCGTGCTCCGCCATGGCGATTACTTCACCAAGCCGTCGATCGATGAGCTGGTGGAGAGGGAGGCGGCTGACCCTGGCTACTGCAGCAGGGTCCCGGATTTCGTCGTCGGGAGGGTCGGGTATGGGCGAATTCACTTCCCCGGTGACACTGATGTGAGGGGGATGGACCTGAATGGGATCGTTAAGTTCGGTAGGCACTCTGTGGAGGTTTACAAGGATGAGGCTAGCAAGCCGCCTTTAGGGCAAGGTCTTAATAAGCCAGCAGAAGTGACGTTGATGCTGAATTTGAGCGTGCTTCCAGAGCCTAGCGCTCTTGGGGAGTTGCTTAAGTGTCAAACGAGAAAGCAAGGCGCTAGGTTCGTTTCGTTCAACCACTCGAGCGGCAGGTGGAAGTTCGAGGTTGATCATTTTAGTCGATTCGGTCTTGTGGACGAGGAGGAAGAGGATGTTGTGATGGATGAGGTGGTTGTTCGGCAGCCTATTGCGGAAGTAAGAGACCCACCTGCAAATGGTCATGAGCTGGAGCTTTCACGTTCGTTGCCTGCTCATCTTGGGCTTGACCCTGCAAAGATGCATGAAATGCGGATGACGATGTTCTCCAATGAGGAAGGTGATGAAGATATGGAGGATGGATTCCCATCTGATCAGAGATACTTCAGCAGTGAGAAGATGAATGTGGATTCACCAAACTCAAGTGCTAAAGGTTTGAGGCTAAGGTCTCTCTCTCCTTTGCATGGTTCTTCTCTGAAAGTCAGCAGGAGACCTGGTGTAATTGGTAGGAGAGAACCACAGGCTCTGCTGGAATACAGTGTAAATTCTTCAGAACATGGCCCATCTTCTCATGGTATTCTTATGTCTGGGCAAAACAAGGGATTTCCAGTGAGAATGACCAAGGTGGATGGCTTTAAGTTGCCATCTGATCAGGAAACTCCTGTGGCTGGGAACGTATATTCCAATTGTGTTGTGGATGCTGCTTTATTTATGGGCAGGTCATTTCGTGTTGGTTGGGGACCAAATGGCATCCTTGTACATTCTGGCAGTCTTGTCAATAGACCCGGAACTGGTCTATCTTCTGTTATTCACATAGAGAAAGTTGCAGGCGACAAAGTTGTACGTGATGAGAAGAACAAAATTAAGGAGGAGCTGACTGATCTGTGCTTCTCAGACCCGCTGGATCTCCATAGGAGGCTTCATCATGAATATCTGGAGACTGAGTCTGACTTGTTTAAATTGAAGCTTCAGAAGGTTGTGGCAAGTCGCTTTGTGTTGCCAGATATTTGCAGATCTTATATTGACATCATTGAAAGGCAGCTTGAAGTCAGTGATTTATCTATGTCTTCTCGTGTGCTGTTAATGCACCAGGTTACAGTTTGGGAGCTTATTCGGGTCTTGTTCTCAGAAAGAGCAACTGGCAACCAGTTAGAGCCTACTGGTGATGAGGACCAGGAGGGGATGATTTTAGATAAGAAAGAAGGTACTGTTGCCATAGACCTTGAAGCACTCCCTTTGGTTAGAAGAGCAGACTTTAGCAATTGGTTACAGGACAGTGTTTGTCATCGGGTTCAAGGAGAGGCGGGCTCCTTAAATGATGCCAGGTATCTGGAACATATTATTCTGCTTTTGACTGGTCGGCAATTAGACACAGCCACAGAAGTTGCTGCCTCGAGGGGTGATGTTCGACTGGCAATTTTGCTAAGCCAGGCAGGTGGGTCAATGCTAAATCGTTCTGACCTTTCTCAGCAACTGGATCTGTGGAAAACAAATGGTCTGGATTTTGATTATATTCAGGAAGACAGGTTAAAGATATATGAGTTGCTTTCTGGTAATGTACAAGGCGCGTTGGTAGATTCATCAATTGACTGGAAACGGTACCTTGGTTTAATAATGTGGTATCAACTATCACCTGATGCATCACTTGATATTATCATTCACTCTTATCACCAGCTCCTTGGTGAGGGCAAAGTCCCATATCCTGTACCTGTATATATAGATGAAGGACCCCTTGATGAGTCACTTCAATGGTCCCCAGGTGACCGCTTTGACATATCCTTTTATCTAATGCTGCTTCATGCAAATCAAGACGAGAAGTTTGGGATGCTAAAAACTATGTTCAGTGCATTCTCATCTTCATATGATCCCTTGGACTACCATATGATCTGGCATCAGTGTTCCATTCTGGAAGCTATTGGTGCTTTCAGTTCAAATGATCTTCATGTGCTAGATTTGAGTTTTGTTTACCAATTATTGTGTCTGGGGAAGTGCCATTGGGCTATCTATGTCATTCTACATATGCCTCATCTTGATGACGCCCCATACATCCATGAGAAGTTGATCAGGGAAATTTTGTCACAATATTGCGAATCATGGAGCAAGGATGAAACTCAGAGAGTTTATATTGCAGAACTTGGTATTCCAGTAGAATGGATGCATGACGCTCTGGCTCTTTACAATGAATACTATGGAGATCAGCAAAGCGCACTGGAGAATTATATTCTGTGTGGCAACTGGAAGAAAGCCCATACAATTTTCATGACATCCATTGCTCATTCTTTGTTTCTGTCATCTAAGCATCAAGAGATCTGGGACATTACAAGCTCTTTGGAGGATCACAAGTCTGAAATTGCTGACTGGGAACTTAGTGCTGGAATATACATAGACTTCTTCATTCTAAGAAATTCTATGCAAGAAGAAAGTACCATGGATGATCCAGATCAACTTGAGAAGAAAAATGAATCATGCAGCGCTTTCTTTGGCCGGTTAAATGATTCATTGATAGTCTGGGGAAGTAAATTACCTGTTGAGGCAAGGGCATGCTTCTCGAAGATGGCAGAGGAGCTGTGCGAGCTACTAATGAACTCCCCCGGCGAGGGCTTGACGCCAGATCTCTACATGGGCTGCTTTCGGACGATGCTTAACGCTCCTGTGCCCGACGACCACAGGTCATCCTACCTGCAAGAGGCGGTCTCTGTTTTCACCGACATACTTTGCAGGGACTGA
Protein Sequence
- >OBART03G05390
MSSDPVFPVLRHGDYFTKPSIDELVEREAADPGYCSRVPDFVVGRVGYGRIHFPGDTDVRGMDLNGIVKFGRHSVEVYKDEASKPPLGQGLNKPAEVTLMLNLSVLPEPSALGELLKCQTRKQGARFVSFNHSSGRWKFEVDHFSRFGLVDEEEEDVVMDEVVVRQPIAEVRDPPANGHELELSRSLPAHLGLDPAKMHEMRMTMFSNEEGDEDMEDGFPSDQRYFSSEKMNVDSPNSSAKGLRLRSLSPLHGSSLKVSRRPGVIGRREPQALLEYSVNSSEHGPSSHGILMSGQNKGFPVRMTKVDGFKLPSDQETPVAGNVYSNCVVDAALFMGRSFRVGWGPNGILVHSGSLVNRPGTGLSSVIHIEKVAGDKVVRDEKNKIKEELTDLCFSDPLDLHRRLHHEYLETESDLFKLKLQKVVASRFVLPDICRSYIDIIERQLEVSDLSMSSRVLLMHQVTVWELIRVLFSERATGNQLEPTGDEDQEGMILDKKEGTVAIDLEALPLVRRADFSNWLQDSVCHRVQGEAGSLNDARYLEHIILLLTGRQLDTATEVAASRGDVRLAILLSQAGGSMLNRSDLSQQLDLWKTNGLDFDYIQEDRLKIYELLSGNVQGALVDSSIDWKRYLGLIMWYQLSPDASLDIIIHSYHQLLGEGKVPYPVPVYIDEGPLDESLQWSPGDRFDISFYLMLLHANQDEKFGMLKTMFSAFSSSYDPLDYHMIWHQCSILEAIGAFSSNDLHVLDLSFVYQLLCLGKCHWAIYVILHMPHLDDAPYIHEKLIREILSQYCESWSKDETQRVYIAELGIPVEWMHDALALYNEYYGDQQSALENYILCGNWKKAHTIFMTSIAHSLFLSSKHQEIWDITSSLEDHKSEIADWELSAGIYIDFFILRNSMQEESTMDDPDQLEKKNESCSAFFGRLNDSLIVWGSKLPVEARACFSKMAEELCELLMNSPGEGLTPDLYMGCFRTMLNAPVPDDHRSSYLQEAVSVFTDILCRD