Information report for OB04G18440
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Brachypodium distachyon: BRADI_1g12050v3
- Oryza sativa: LOC_Os04g32960, LOC_Os02g32350, OsTudor-SN
- Setaria viridis: SEVIR_7G056100v2, SEVIR_1G178700v2, SEVIR_7G090900v2
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: J3LXG9
- RefSeq: XP_006653357.1
- AlphaFoldDB: J3LXG9
- KEGG: obr:102701539
- OMA: AGMFYVQ
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437
- PANTHER: PTHR12302 , PTHR12302:SF10
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: J3LXG9
- eggNOG: KOG2039
- STRING: 4533.J3LXG9
- HOGENOM: CLU_005966_2_0_1
Sequences
CDS Sequence
- >OB04G18440
ATGGTGACCGGCGGCGGCGGGGCCGTACAGGCGGCGGCGGCGGCGCCGAGATGGCTCCGGGGGAGAGTCAAGTCCGTGCCTTCCGGCGACACCTTGGTGATCATGGAGAGCGCCGCCAAGACGGATAAGATCCCTCCGCTGGAAGAGTGCGTCACGCTCTCGTGCATCATTACGCCTAGGCTGGCACGGCGTGGTGGGATAGACGAGCCTTTCGCATGGAAGAGCAGAGAGTTCCTGAGGACGATGCTCATCGGCCAAGAGGTCTTGTTTCGAGTAGAAAATGCGCCCCAGTCCTCCGGACGCAAATTCGGAACAGTATACTTTGGCGAGAAGAACGTCGCTTGCCTGGTAATCGCTGCTGGTCTTGCAAAGGTGAAAGACCAAGCGAGGAAGGGTGACCTAAGCCCATATGTCCCTGAGTTGCTAAGGCTCGAGGATCTAGCCAAGAACCAAAACTTAGGCCATTGGACCAAGGATCTTGGTGCTCTTGAGGAGTCAGTAAGATGTCTGCCACCATCGGCAATCGGAGATGGTAGAGCTTTTGATGCCAAGAGCTTTGTTGCTGAAAACAAAGGCAAGAGCTTGGAAGCCATTGTGGAGCAAGTTCGCGATGGAAGCACTATTCGCGTGCACTTGATTCCCAGCTTCCATTTTGTCCAAGTTTATATTTCTGGCATCCAAGCCCCATCAATGGGACGACGAATAACTAATCCAAATGCTCAAGTTGAAGCTGTTGGCAATGGTGAAGCAAATGGAGAAGCTTCTGCTACCCCAACACCAATGACAGCAGCACAGAAACTCATGGCGTTACCTGCAATCCCAGCAGACAGGTTTGGGGAGGAAGCCAAGCACTTCACCGAGACACGGGTTCTCAACAGAGAAGTGCGGATTGTGTTGGAAGGTACAGATAATTTCAACAACATATTTGGTTCGGTTTATTATTCTGATGGGGACATGGCAAAGGACTTGGCACTTGAGCTAGTACAAAATGGGCTTTCAAAGTATGTCGAATGGAGCGCAAACATGCTTGATCCTCAACTTAAAATAAAGTTGAGGAATGCTGATCTTCAGGCTAAGAAGGAACATATAAGAATGTGGACTGGATTTAAACCCCCGGTGACAAATACAACCCCAATTAAGAACAAAAATTTCACAGGAAAAGTGATAGAGCTTATGAATGGATACTGCATAGTGGTTGCTGATGATGTTGGACCTTATGGAAGTCCTTCAGCAGAACGCCGGGTTAATCTTTCAAGCATTAGGCCTCCTAAGCTGGAGAAGTATTCGGAAGAGAACAAATCTTATGAACAATTTGCTCGTGTAGTAAAAGAATTCCTGCGCAGCAGATTGATTGGAAAACAAGTCAATGTCTCCATGGAGTACTCAATGAAGATCAACACTACGGATGGAAAAAATGGTGAAACCAGAGTTTTGGAGTACGGCTCGGTCTTTCTTCCCTCACACGTTGACGCAGAGACCGCTCCTTCCACTGCCAGCCCGGAGAACCAACCTGGAGTCAACGTTGCTGCGCTGCTCCTCTCGCGTGGACTGGCAGACGTAACCAGGCATCGGGAGTACGAGGACAGGTCACACTACTACGATGCTCTTGTTGCTACCCATGCTCGAGCCGAAAGGGCGAAGAAAGGCTACCACTCCAAGAAGGATTTGCCAGTGATCCACATAACCGATCTGACGACGGCTCCACCGAAAAAGGCAAAGGAGTTCCTTCACCTATTGCGCAGCAGGAGGCACCCTGCCATCGTCGAGCACGTTTTCAACGGCCATCGCTTCAAAGTGACGATCCCTAAAGAGACCTGCACAGTTGCATTCTCATTCTCCGGCGTTCGCTGTCCGGCGAGGGACGAGCCCTATTCCAACGAGGCCACTACGATGATGAGGAGGAGGATACTGCAACGAAATGTTGAGGTTGAGATTGAAGCAGTCGATAGATTTGGAACGTTCTTGGGTTCCTTGTGGGAGTCCAATACCAACGTGGCATCGGTTCTTTTGGAGGCTGGTCTAGCTAAGCTCGGTCCATTTGCAGTGGACAGGATCCCGGAGGCTCAGGTTCTCATAAGGCTGGAAAAAATGGCAAAGCAAAAAAAGTTGAAGATATGGGAGAACTACGAGGAAGTAGAGGTTCCCAACAGGCCCACACATGATGGCAATAAAGAGATTATCAACGTTATTGTTACTGAAGTTCTCGGCGCTGGAATGTTCTATGTACAATCACTTGCTGATGATGAACGCGTGAAGTTCATTCGCCAACAGCTCGATTCTCTAGATGCTAAAGATCCAGGTGAAACTTTAGAAGTGAAAGATCAAACTTCAAAAGATGAGCATTCATCGCCGGTGGCTGATTTGGAAATTAAAGATTTACCTGAAACATTGGATGCTGAAGAGCCATGTTCTGATGTGGCTAAGGATGAGGAGGCCATTACCTCCAAGGATAATGTCGAATCGGTAGCTCCATTAGCGAATGCTTCAATCACTACTCCATTTACCCCTTCTATGGGAGAAATGGTGCTTGCCTGGTTCAGCTTCGATCATTCATGGAATAGAGCCATGGTTATAAGTGAGCATCAGGGAGCTACAGAGCTTGAGTTTGAAGTATTTTACATTGACTATGGAAACCAAGAGCATGTTCCCTATAGTTGCCTAAGACCTATTGACCCATCAATTTCCTCTATTCATCCCCTTGCCAAGCTATGCAGCCTTGCTTTTGTGAAGGTACCAGGTCTAAATGACTACCTTGGAGAAGAAGCAGCGATACATCTAAACAGTATCTTAGTTGACAAAACATTTGAGGCTGTTGTTGAAGAACGAGATGACCTAGGAGGAAAACTACAGGGTCAAGGAGCTGGGGAAATCCTTGCCGTGACTTTACTCGACAGTGAGACTGAAAATAGCATCAATGCTGAGATGCTAGAGAAAGGGTATGCTCGACTTGAAAGGCGAAGATTGGACTTGGGGGAGAGACGGATAGGCATAAAGAAGCTTGAAAAATCTCAGGAGGAAGCAAGGAAAGAGCAACTAGGTGTTTGGGGCCAAGAAAATGCAAGAAATCATGTTTTAGATGATGACAAAGAGTACCCTGCTCTGGCTAGAGCACTAGCTCCCCCTAAGAAATGA
Protein Sequence
- >OB04G18440
MVTGGGGAVQAAAAAPRWLRGRVKSVPSGDTLVIMESAAKTDKIPPLEECVTLSCIITPRLARRGGIDEPFAWKSREFLRTMLIGQEVLFRVENAPQSSGRKFGTVYFGEKNVACLVIAAGLAKVKDQARKGDLSPYVPELLRLEDLAKNQNLGHWTKDLGALEESVRCLPPSAIGDGRAFDAKSFVAENKGKSLEAIVEQVRDGSTIRVHLIPSFHFVQVYISGIQAPSMGRRITNPNAQVEAVGNGEANGEASATPTPMTAAQKLMALPAIPADRFGEEAKHFTETRVLNREVRIVLEGTDNFNNIFGSVYYSDGDMAKDLALELVQNGLSKYVEWSANMLDPQLKIKLRNADLQAKKEHIRMWTGFKPPVTNTTPIKNKNFTGKVIELMNGYCIVVADDVGPYGSPSAERRVNLSSIRPPKLEKYSEENKSYEQFARVVKEFLRSRLIGKQVNVSMEYSMKINTTDGKNGETRVLEYGSVFLPSHVDAETAPSTASPENQPGVNVAALLLSRGLADVTRHREYEDRSHYYDALVATHARAERAKKGYHSKKDLPVIHITDLTTAPPKKAKEFLHLLRSRRHPAIVEHVFNGHRFKVTIPKETCTVAFSFSGVRCPARDEPYSNEATTMMRRRILQRNVEVEIEAVDRFGTFLGSLWESNTNVASVLLEAGLAKLGPFAVDRIPEAQVLIRLEKMAKQKKLKIWENYEEVEVPNRPTHDGNKEIINVIVTEVLGAGMFYVQSLADDERVKFIRQQLDSLDAKDPGETLEVKDQTSKDEHSSPVADLEIKDLPETLDAEEPCSDVAKDEEAITSKDNVESVAPLANASITTPFTPSMGEMVLAWFSFDHSWNRAMVISEHQGATELEFEVFYIDYGNQEHVPYSCLRPIDPSISSIHPLAKLCSLAFVKVPGLNDYLGEEAAIHLNSILVDKTFEAVVEERDDLGGKLQGQGAGEILAVTLLDSETENSINAEMLEKGYARLERRRLDLGERRIGIKKLEKSQEEARKEQLGVWGQENARNHVLDDDKEYPALARALAPPKK