Information report for OB02G39960
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Oryza sativa: LOC_Os02g51880
- Setaria italica: SETIT_016290mg
- Setaria viridis: SEVIR_1G332000v2
- Triticum aestivum: TraesCS6A02G318300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: J3LH79
- AlphaFoldDB: J3LH79
- OMA: CTRWGSE
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- eggNOG: KOG0029
- STRING: 4533.J3LH79
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >OB02G39960
ATGGCCGGCCTGTGCAAGTACGGTAACACTACGCAACGTGAAAGAACGAAATACGTTTTCCAACTTGTTTTACGGAAACCACGCTATCTGGCATTCTGGCCGTTCCGGCTCGGAGGTTCCCGTCCTTCCTCTTGGCTCTTGCACAGTGCCGGCCCTAGGCCAACCCCTGAACCCTCCCCTCCCCAAATCCTCCGTTCCCCACCCGGCGAGCTCGACGCCGCCAGGCGGAATCCCGCAATGGAGGAGGGCAACGAGGCGCAACCGCCTGTACAGCCACAAGCCGAGGCCTCGGAGACGCCGCCTCCGGCTCCAATGGACCAAGACGAGGGCCAGGCGGCAGCGGCGGACCCCATGGATGGTGAGCCGGGCGGCGCTACGGCGGCTGCGGAGACCAGGGAGGGTGAAGCGGGATACGCCGCGGCGGACGCTGATCCCATGGAGGATGAAGCGGCAGACGAAGCCGGCGCCGCGGAGCCCATGGAGGACGACCCGCCCACGTCCTCGCCGACCCCGTCCGCGCCGTCCGCCACCGCGGCCGTCGACGACTCAACCATTGCGCGGAAGCGACGCCGCCGTAAGAAGGCGGTCCCCGGCATGACCCCCCCGGCGGGCGTCCGTGTCCTCCGAGCAGCCGCATCCACCCCATCCGCGGCGCATCTCAACGGCGTCCCTCGCCGCCGTGGTCGCCCTCCGACCTCCTCCTCCCTCCGCCTCGCCCGAGAGCTCGACGCTGAGGCTCTCATAGCCCTCGCGGCGGGGTTCCCTGCGGACTCCCTTTCCGAGGACGAGGTCGCCGCTGCCGTCCTCCCACGCATCGGTGGCGTCGACCAGACCAACTATCTCGTAGTCCGCAACCACGTCCTCGCGCTCTGGCGCTCAAATCCGCTCTCCCCCGTTGCATCCAACGCCGCGCTCACCTCCATTCGCGCCGAGCACGCGCACCTTGTCGCTGCTGCACATTCCTTCCTTTCAGACCATGCGTACATCAATTTTGGCCTGGCCCCATCCGTTATTTCCCTCCCACCCTGCCCCCCTCCCTCGCTTCCTCCCCCTTCTGTCCTTATTGTCGGCGCTGGTCTTGCTGGCCTCGCTGCTGCACGGCACCTGATGTCCCTTGGCTTCAAGGTCGCCATTGTTGAAGGACGACTGCGTCCTGGCGGCCGCGTGTTTACTAAGTCTATGCGCTCCACCGCTGTGGAACATCCTGACATTGCAGCATCTGCTGATCTTGGAGGCAGTGTGCTCACCGGTATCAATGGGAATCCCCTTGGTGTCATTGCACGGCAGCTTGGGTTTCCACTACATAAAGTGCGGGACAAGTGCCCGTTGTATCTTCCAGATGGTCGCCCAGTTGACCCTGATATGGACAACCGTGTTGAGGCTGCCTTTAATCAGCTTCTTGACAAGGTCTGCCAATTGCGGCAGGTTGTCGCCGACAACATCCCACATGGCGTGGATGTGTCACTTGGCATGGCATTGGAGGCATTCCGGGAGGCACATGGTGTTGCTGCTGAGCAAGAGGAACGGATGCTTCTTGACTGGCATCTAGCGAATCTGGAGTATGCCAATGCTGCTCCTCTTGCTGATCTATCCATGGCCTTCTGGGATCAGGATGATCCATATGAAATGGGTGGTGACCACTGTTTTATTCCTGGCGGCAATTCTCGTTTTGTCCGTGCGCTTGCTGATGGCATACCGATATTCTATGGGCAGAATGTGCGAAGGGTACAGTATGGGTGCGATGGTGTGATGGTGTACACTGATAAACAACATTTTCGTGGTGATATGGTGCTCTGCACAGTCTCCCTTGGTGTGCTGAAGAAGGGTGACATTCAGTTTGTGCCTGAACTCCCAGCTCAGAAGCTAGAGGCCATTGAAAGATTGGGTTTCGGGTTGCTTAACAAAGTTGTGCTACTGTTCCCGTATGACTTCTGGGATGGAAGGATTGATACGTTTGGGCACTTGACCGAGGACTCTGGTCAGCGTGGAGAGTTTTTCCTGTTCTATAGCTATTCGTCTGTCTCAGGAGGGCCACTGCTCATTGCACTTGTTGCCGGGGAATCTGCAATTGAGTTTGAGAAGACATCGCCAGCAGAAAATGTTGAGAAGGTACTAGAAACACTTAGGAAAATATTTTCACCAAAGGGGATTGAGGTTCCAAAGCCTTTGCAGGCCATATGCACTCGATGGGGCACTGATAAGTTCACATATGGTTCATATTCCTATGTGGCTATTGGATCTTCTGGAGATGATTATGACATTCTGGCAGAGAGTGTATGTGACAGAGTTTTCTTTGCTGGGGAGGCAACAAATAGGCGGTATCCTGCAACAATGCATGGAGCTTTGCTTAGCGGGTATAGGGAGGCCGCCAACATTGTAAGAGCAGCTAGGAGGAGAGCAAAAAAGGTGGGCTCACCTGAGAAAATGGATGTTAATGATGAAGTCAAATTTGAAATTGAAGTCGACAGCATTGATTTGGATGATCTCTTCCGTACTCCTGATGCTGCTTTTGGGGGCTTCTCAGTTCTCCATGACCCATCTACCTCTGAACCTGATTCAATTTCATTGTTGCGTGTTGGAATTGGTGCAAGAAAGTTGGGTTCTGGTTCACTTTTCCTCTATGGCTTAATTATGCGAAAAAATGTAGCCAATTTGGCTGCAATGGAGGGTGATGAGCGACGATTGAGTACACTGTACCGAGATTTCGGGACAAAACTTATGGGTTTAGATGGCCTAGGTGATTCTGGGTCAAGCCTTATATATCGGATAAAAGCTGCTGCTAGGAAATAA
Protein Sequence
- >OB02G39960
MAGLCKYGNTTQRERTKYVFQLVLRKPRYLAFWPFRLGGSRPSSWLLHSAGPRPTPEPSPPQILRSPPGELDAARRNPAMEEGNEAQPPVQPQAEASETPPPAPMDQDEGQAAAADPMDGEPGGATAAAETREGEAGYAAADADPMEDEAADEAGAAEPMEDDPPTSSPTPSAPSATAAVDDSTIARKRRRRKKAVPGMTPPAGVRVLRAAASTPSAAHLNGVPRRRGRPPTSSSLRLARELDAEALIALAAGFPADSLSEDEVAAAVLPRIGGVDQTNYLVVRNHVLALWRSNPLSPVASNAALTSIRAEHAHLVAAAHSFLSDHAYINFGLAPSVISLPPCPPPSLPPPSVLIVGAGLAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKSMRSTAVEHPDIAASADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDNRVEAAFNQLLDKVCQLRQVVADNIPHGVDVSLGMALEAFREAHGVAAEQEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSRFVRALADGIPIFYGQNVRRVQYGCDGVMVYTDKQHFRGDMVLCTVSLGVLKKGDIQFVPELPAQKLEAIERLGFGLLNKVVLLFPYDFWDGRIDTFGHLTEDSGQRGEFFLFYSYSSVSGGPLLIALVAGESAIEFEKTSPAENVEKVLETLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSYSYVAIGSSGDDYDILAESVCDRVFFAGEATNRRYPATMHGALLSGYREAANIVRAARRRAKKVGSPEKMDVNDEVKFEIEVDSIDLDDLFRTPDAAFGGFSVLHDPSTSEPDSISLLRVGIGARKLGSGSLFLYGLIMRKNVANLAAMEGDERRLSTLYRDFGTKLMGLDGLGDSGSSLIYRIKAAARK