Information report for OB02G10860
Gene Details
|
|
Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Brachypodium distachyon: BRADI_3g01297v3
- Oryza sativa: LOC_Os02g02290, OsBRM
- Saccharum spontaneum: Sspon.04G0020470-2B
- Setaria italica: SETIT_028641mg
- Setaria viridis: SEVIR_2G237601v2
- Triticum aestivum: TraesCS6A02G034200, TraesCS6B02G048200
Gene Resources
- Pfam: PF00271 PF00176
- UniProt: J3L8W9
- RefSeq: XP_006648224.1
- KEGG: obr:102702914
- OMA: HNQAPKW
- InterPro: IPR000330 , IPR001487 , IPR001650 , IPR014001 , IPR014978 , IPR027417 , IPR036427 , IPR038718 , IPR049730
- PANTHER: PTHR10799
- SUPFAM: SSF47370 , SSF52540
- PROSITE: PS51192 , PS51194 , PS51666
- Gene3D: 1.20.5.170 , 1.20.920.10 , 3.40.50.10810 , 3.40.50.300
- OrthoDB: J3L8W9
- CDD: cd18793
- eggNOG: KOG0386
- STRING: 4533.J3L8W9
- HOGENOM: CLU_000942_1_1_1
Sequences
CDS Sequence
- >OB02G10860
ATGCAGCCTGGCGGCGAGGCTCCTCCCCCGTCCGGGGGCTCGCCGGCGACGTCGCCGCGGCCGCCCGTGTCGCAGGGGCAGGGGCAGCAGCAGCAGCAGCAGCTAGGGTTTAGGAATCAGGCAATGATGCATCACCATGAGCAGCAGCAGCAGCAGCAGCAAGGGTACCCGGCCGGTGTGGCGCCACACGGTATGATGGGAGGTGGTGGCAGCGGCAGCTTCCCTCCGTCGTCAGGTCCAATGCCCCCATTCCAGGGCCAGAGGAACCTGCCCCAACCTGGCGGACCGCAGGGCCTTGTCGGAGGCCAGCAGCAAAGCCCGAGTGCTGCAATGCAACAAGCATACCTGCAGTACATGATGCAGCAGCAGCAGAAGTCACACGGGATGCTTCTCCAGCAGCAGCAGCAGACCAAGATGAATATGGCGGGGCCATCTGCAAGAGACCAGGATGTGGCTGCCAACACTGCAAAAATGCAGGAGCTTATGTCCCTTCAGGCCCACGCCCAAGCCCAGATGTTCAAGAGACAGCAGTCTGAGCATCTTCAACAGGCAGAGAAGCAGACGGAACAGGGGCAGCCGAGCAACAGTGAGCAAAGGAGTGGTGATATGAGGCCTCCTATGCCACCACAAGGAGTACCTGGGCAGCAGTTGTCTTCAGCAGGTATGGTGAGGCCGATGCAGCCAATGCAAGGGCAAGCTGGCATGGGCAATGCTGGAGCTAACCCAATGGCAATGGCCCAACTTCAAGCCATCCAGGCCTGGGCCAAGGAGCACAACCTCGACCTGTCCAATCCTGCAAATGTGAGTCTCATTTCTCAACTCCTACCGATGTTGCAGTCAAACAGAATGGCGGCCATGCAGAAGCAGAATGAGGCAGGCATGGCTTCACAGCAGCAATCTGTTCCCTCGCAGATGAACAGTGACGCACCAGGGCATAGTAATTTTCCTAGTCAGGGTGGCGCAGCGAAGCCCCGACAGTCTCTCCCACCTAGCACCTCTGTTTCTGGTGGGGCAGAACCCAAGATGATGAATCTGAGCAACATGCAGATGCAACAACAGTTAGCTGCTCAGAACAGAGATAGCTCAAATGACAGGGCTGTGAGGCCAGCTGTGTCAATGGGTAATGGTGGACAGATGATGCATATGCCCCAAAGTTCTGGACATGCAAACAAGATTCCTGAGCAGCCCAATCCAAATAATGCAAATTCTGAAGCAATGCAGATGCAATATGCAAGACAATTGCAGCAGGCTAATCGAGCTACTGCCCCTTCAGCAAATTCTGGTGAAGCAGGAGGATCGCAGACCCCGAATCAAGCTGCCCGACCACCTATGGGTTTCACCAAACATCAGCTTCATGTACTTAAAGCCCAGATATTAGCTTTTCGCCGTCTGAAGCGTGGTGATAAGAAGCTGCCACCAGAAGTTCTTGACTTAATCATGTCTGAACCACCACCAACTGATTCACAAGCGCAGCAGGTTTCTGGACCTCCAGTAACAAACCGCGAGAGATCTGCCACAAGCAGTGCTGGTGAACATGGAAGACCCGTGGAGAGTGGTGGTATAGCTCCTGAAAGATCTACCCTGTTGAAGGCACCCTGTTTACCAAAGGTGGAGGTTTCTGCACCTGAGGACAAAACAATTTCTGCTAGTGGTCCCATGCAAGCAATTAAAGCTTCACCCAAGGATCCTGTTAGAATTGGACCTGTTTCAGCGCCTGAACAAACTAATACCGCCCTGATTAAATCTGAGCAGGATCCAGAAAGGGGTATCCAGAGAACACCTGGGAGAAGTGACTACAATGGTGAAAGGGGGAAATCTGTGCCAGCAGAAAGCGGATCAGCAGATGCTGAGCAGGCAAAAAGAGCTGGCTCGTCAAGTAGTGCACCTACTCCGAGAGATGTTTCGAGAAAATACCATGGCCCACTATTTGATTTTCCATCCTTTACCAGGAAACACGATTCCATGGTATCTGCAAATTATAACAGTAATCTAGCACTTGGTTATGATGTAAAAGATTTGTTAGCTCAGGAAGGCATGATAGTTCTTGGTAAGAAACGAGAGGATAACTTAAAAAAGATTAGTGGCTTGCTTGCAATTAATCTAGAGAGGAAAAGGATCCAACCGGATCTTGTTTTAAGGCTGCAGATTGAAGAAAAGAAGCTGAAACTCCTTGAATTTCAGGCTCGCTTGAGGGATGAAGTTGAACAGGAACAGCAAGAAATAATGGCAATGCCTGATAGGATATATAGGAAGTTTGTTAGACAATGTGAACGCCAGCGTGTTGAGCTTATAAGGCAAGTTCAGCAGATGCAGAAAGCCTCAAGAGAAAAGCAGCTCAAATCCATTTTCCAGTGGCGCAAGAAGCTTTTGGAGGCACATTGGGCCATTCGTGATGCACGGATTACTCGTAACAGAGGGGTAGCCAAGTACCATGAAAGGATGCTGAGGGAATTCTCAAAGAGAAAGGATGATGATCGAAACAAAAGAATGGAGGCACTAAAAAACAATGACGTAGAAAGATATCGTCAAATATTGTTGGAGCAACAAACCAGTGTTCCTGGTGATGCAGCTCAAAGATACAATGTTCTATCTTCTTTCTTGACTCAGACTGAGGAGTACCTTTATAAACTTGGTGGGAAAATAACCGCTGCCAAGAATCATCAACAAGTTGAAGAGGCAGCAAATGCTGCAGCGGCTGCTGCCCGAGCACAGGGTCTTTCTGAAGAAGAAGTGAAGGCTGCTGCACAATGTGCTGGTCAGGAGGTTATGATAAGGAACACATTCTCTGAAATGAATGCACCCAGGGAAAATACATCTGTTAATAAGTACTACACATTGGCTCATGCTGTGAATGAGAGAGTTACAAGACAGCCCTCACTGCTGCGAGCAGGAACTTTAAGGGACTACCAGCTGGTGGGACTTCAATGGATGCTTTCCTTGTACAATAATAAGTTGAATGGTATTTTGGCTGATGAGATGGGTCTTGGCAAGACTGTACAGGTTATGTCTCTGATTGCATACTTAATGGAGTTTAAAGGGAATTATGGACCTCATCTCATAATAGTACCAAATGCAGTCTTGGTCAACTGGAAGAGTGAATTGCTGAATTGGTTGCCATCTGCATCTTGCATCTTTTATGTTGGTGCGAAGGATCAACGGCAAAAATTATTCTCTCAGGAGGTTCTGGCTGTGAAATTTAATATTCTTGTAACAACATATGAGTTTGTTATGTATGATCGTTCCAAGCTTTCAAGAATTGATTGGAAGTACATTATTATTGATGAGGCCCAACGGATGAAGGACAGAGAGTCAGTCTTGGCACGAGATCTTGATCGTTATCGTTGCCAACGCCGTCTCCTCCTCACTGGCACCCCTCTACAGAATGATCTCAAGGAGCTTTGGTCCCTCCTAAATTTATTGCTACCAGAAGTATTTGACAATCGCAAGGCATTTCAAGATTGGTTCTCAAAACCTTTTCAGAGGGATGGTCCTACACATAGCGAAGAAGAAGATGATTGGCTAGAAACTGAGAAAAAAGTAATTATTATTCATAGGCTGCATCAAATTTTGGAGCCCTTTATGCTACGTAGGCGTGTTGAGGATGTTGAAGGCTCACTTCCACGAAAGGAGTCAATTGTTTTGAGATGCAGAATGTCTGGCATTCAAGGTGCTATTTATGACTGGATCAAATCCACTGGCACCATTAGGGTTGATCCTGAAGATGAGAAAGCACGTATCCAGAGAAATCCAATGTACCAGGCCAAGACATATAAGAATCTCAATAACAAGTGCATGGAGCTGAGGAAAGTTTGCAACCATCCATTGCTGTCATATCCTTTTATGAATTACTATGGGAAAGATTTTATAATCAGATCTTGTGGGAAGTTGTGGAATCTTGATAGGATTTTAATTAAGCTTCATAGGTCAGGCCATCGTGTACTGCTTTTCAGCACTATGACAAAACTTCTTGACATCCTGGAGGACTATTTGCAATGGAGGCAACTTGTATACAGACGAATTGATGGAACAACTAGCTTGGAAGATCGTGAATCAGCAATTGTTGACTTTAACAGGCCTGATTCTGACTGTTTTATATTTTTGCTTAGTATCCGGGCTGCTGGGAGGGGTCTGAATCTTCAGAGTGCAGACACTGTTGTAATTTATGACCCTGATCCGAATCCGCAAAACGAAGAGCAAGCTGTTGCTAGGGCCCATCGTATAGGGCAGACTAGGGATGTGAAAGTTATTTACATGGAGGCTGTTGTTGATAACATCTCAAGTTATCAAAAAGAGGATGAGTTGAGGAATGGGGGAAGTGGAGATTTGGAGGATGATCTTGCTGGAAAAGACAGATACGTAGGTTCAATTGAAAGTCTCATCCGCAATAATATCCAACAGTATAAAATTGACATGGCAGATGAAGTCATTAATGCTGGTCGATTTGATCAAAGAACAACCCATGAGGAAAGGAGGATGACTTTGGAAACACTCCTGCATGATGAAGAGAGATATCAAGAAACTGTTCATGATGTTCCTTCATTACAGCAAGTTAACCGCATGATTGCTCGGACTGAAGAAGAAGTTGAGCTATTTGATCAGATGGATGAAGAATTTGATTGGACAGGAGATATGATGAAACACAATCAAGCTCCAAAGTGGCTCCGTGTTAACTCCACAGAGCTTGATGCTGTTGTAGCGAGCTTATCCAAAAAACCCTTAAGAAATATGGCATCTGGTGGCATTGCTCTTGACACTAATGAAAAACTTGAGAAACGAAGGGGGCGGCCTAAGGGGTCTGGTAAGTACTCCATCTACAGGGAGATTGATGATGAAGATGAGGAGGCATCTGATGAAGATTCTGAAGAGAGGAATACCTCATCTCTGCCTGAAGAAGGGGAAATGGGAGAATTTGAAGATGAAGAGGACAATGATGATTCAGTGCCTGATAACAAGGATCAATCAGAGGAAGAAGAGCCTATCAATGATGATGGGTATGATTATACACATGGGATGGGACGCAGAAAATCCCATAGGTCTGAAGAAGCTGGTTCAACAGGATCTTCATCTGGGGGCCGTAGATTACCACCACCTGCACCTTCGTCCTCTTCCAAAAAGCTGCGTTCTTTGTCTGCTTTAGATTCCCGCCCGGGTGCTTTATCGAAGAGAAGTGCGGATGACCTAGAGGAAGGAGAGATTGCATTATCTGGGGATTCACATCTGGATCTCCAGCAATCAGGCAGCTGGAATCATGAACGAGATGATGGTGAGGATGAACAGGTAGTACAGCCAAAAATAAAGCGCAAGCGGAGTATTCGCATTCGTCCAAGACCTAATGCAGAAAAACTGGATGATAGATCTGGTGATGGGGCCATCCCTCAGCGTGGTGCTCATCTTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGTTTTTGCTGATCCTGCTTCCAGGCAGCAAGACACGGTTCACCGAACAGTAAAACAAAAGCGTAACATGCCATCTAGAAAGGCTTCCCCTGCCACCAAGGCAGGGAAAATGACTCAGCTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCTAAGGAAAATTGGAGTAACAAGGTGATAGAATCTGCTGGTCCAGATTTGAGTGGCACAAAGATGTCTGACAGTATGCAAAGAAAGTGCAAGAATGTGATAAACAAACTTTGGAGGAGGATTGACAAAGAGGGTCACCAAATCATACCAAATATATCTTCTTGGTGGCGAAGGAATGAGAATTCCTCATTCAAAGGTCTGGCTGGCAGCACCCTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGTGGTGTGAACGAGTTCATAGCTGACATGCAGCAAATGTTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGGTCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCAGACTCAGACTTCAGAGAGGCTAAGAGCGCTATGTCATTTTCGAATCCTGGAGGAGGTTCAAGTGGTGCTGCTGCCCAATCAACAAAGCAATCTGCTTCAGGCCAGAAACGCCGTTCAAGCACTAGTGAAGCGGATCAGCATGGTTCAAGCAGTAGCAGACATAATCAGCATGTATCAGTTGGTGAGGTTTCTGGGCGGGTCCACCCTTCAAAATCTGAGAAGGACTCCAGGCATTCTGGACAAGGGAGCAGGGATCAGTTCACAGATAGTGCAGGGCTGTTCAGGCACCCTACGGATATGTTCATAGTTAAGAAGAAGAGAGATCGCAGGCCGAGCCTGGGATCTCCATCCAGTTCAGGCCGAGCTGGGCCTCTCTCCCCGACCAACACCGGGCGGATGGGACCTGTGCCCTCACCCAGAGGGGCCAGGACGCCCTTCCAAAGGGACCCACACCCTTCTCAGCAGTCCATGCATTCAGCTGGATGGGGTGCTCATTCTGTGCAGCAATCTGATCGCGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTGCCAAGAGATCGAGGACTGACAGTGGCAAAAGACGGCCAAGCCATATGTGA
Protein Sequence
- >OB02G10860
MQPGGEAPPPSGGSPATSPRPPVSQGQGQQQQQQLGFRNQAMMHHHEQQQQQQQGYPAGVAPHGMMGGGGSGSFPPSSGPMPPFQGQRNLPQPGGPQGLVGGQQQSPSAAMQQAYLQYMMQQQQKSHGMLLQQQQQTKMNMAGPSARDQDVAANTAKMQELMSLQAHAQAQMFKRQQSEHLQQAEKQTEQGQPSNSEQRSGDMRPPMPPQGVPGQQLSSAGMVRPMQPMQGQAGMGNAGANPMAMAQLQAIQAWAKEHNLDLSNPANVSLISQLLPMLQSNRMAAMQKQNEAGMASQQQSVPSQMNSDAPGHSNFPSQGGAAKPRQSLPPSTSVSGGAEPKMMNLSNMQMQQQLAAQNRDSSNDRAVRPAVSMGNGGQMMHMPQSSGHANKIPEQPNPNNANSEAMQMQYARQLQQANRATAPSANSGEAGGSQTPNQAARPPMGFTKHQLHVLKAQILAFRRLKRGDKKLPPEVLDLIMSEPPPTDSQAQQVSGPPVTNRERSATSSAGEHGRPVESGGIAPERSTLLKAPCLPKVEVSAPEDKTISASGPMQAIKASPKDPVRIGPVSAPEQTNTALIKSEQDPERGIQRTPGRSDYNGERGKSVPAESGSADAEQAKRAGSSSSAPTPRDVSRKYHGPLFDFPSFTRKHDSMVSANYNSNLALGYDVKDLLAQEGMIVLGKKREDNLKKISGLLAINLERKRIQPDLVLRLQIEEKKLKLLEFQARLRDEVEQEQQEIMAMPDRIYRKFVRQCERQRVELIRQVQQMQKASREKQLKSIFQWRKKLLEAHWAIRDARITRNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYRQILLEQQTSVPGDAAQRYNVLSSFLTQTEEYLYKLGGKITAAKNHQQVEEAANAAAAAARAQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRENTSVNKYYTLAHAVNERVTRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMSLIAYLMEFKGNYGPHLIIVPNAVLVNWKSELLNWLPSASCIFYVGAKDQRQKLFSQEVLAVKFNILVTTYEFVMYDRSKLSRIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFQDWFSKPFQRDGPTHSEEEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPRKESIVLRCRMSGIQGAIYDWIKSTGTIRVDPEDEKARIQRNPMYQAKTYKNLNNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHRSGHRVLLFSTMTKLLDILEDYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTRDVKVIYMEAVVDNISSYQKEDELRNGGSGDLEDDLAGKDRYVGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQQVNRMIARTEEEVELFDQMDEEFDWTGDMMKHNQAPKWLRVNSTELDAVVASLSKKPLRNMASGGIALDTNEKLEKRRGRPKGSGKYSIYREIDDEDEEASDEDSEERNTSSLPEEGEMGEFEDEEDNDDSVPDNKDQSEEEEPINDDGYDYTHGMGRRKSHRSEEAGSTGSSSGGRRLPPPAPSSSSKKLRSLSALDSRPGALSKRSADDLEEGEIALSGDSHLDLQQSGSWNHERDDGEDEQVVQPKIKRKRSIRIRPRPNAEKLDDRSGDGAIPQRGAHLAFQGDGDYDSQFKSEQVFADPASRQQDTVHRTVKQKRNMPSRKASPATKAGKMTQLSGSGEGSAEHSKENWSNKVIESAGPDLSGTKMSDSMQRKCKNVINKLWRRIDKEGHQIIPNISSWWRRNENSSFKGLAGSTLDLQKIEQRVDGFEYGGVNEFIADMQQMLKSVVQHFSYRHEVRVEAETLHNLFFNIMKIAFPDSDFREAKSAMSFSNPGGGSSGAAAQSTKQSASGQKRRSSTSEADQHGSSSSRHNQHVSVGEVSGRVHPSKSEKDSRHSGQGSRDQFTDSAGLFRHPTDMFIVKKKRDRRPSLGSPSSSGRAGPLSPTNTGRMGPVPSPRGARTPFQRDPHPSQQSMHSAGWGAHSVQQSDRGGSSSPGIGDIQWAKPAKRSRTDSGKRRPSHM