Information report for NC8G0218200
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Daucus carota: DCAR_029206
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Nicotiana attenuata: A4A49_07894
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A5K1FS67
- EMBL: LR721786
- AlphaFoldDB: A0A5K1FS67
- OMA: CTRWGSE
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A5K1FS67
Sequences
CDS Sequence
- >NC8G0218200
ATGGACGAGGGACGCGATACCACGGCAGAAGCGTCCTCGGCCGGACGCCCGTCGCCTGAAAATCCTCCGCACGGGCTCTTCTCTCAGCCGGAAATCTCCCCTCCTGTACCGTTTACTTCGCCGGCGCATCCCCTCTTGGATGAGGGCGAGTCGCGGGGGGCTCTTGGGACTTTCAATACCGATCAGCGTCCCATCCCGGAAAACGCCATATCAACACCATTGATGACGCCCGAGATTCGAGGTCTACCAGAAGACTCTTCTTCCGTTCCCGGGACAGCTTCACAAGCCGTTCCTCAGCCGGCGGCCGAGGGCCCTTTTCCATTGGATACCAGAGAATCGTCCGAGAACATGCTATCGGACTCTCTGACGACAACGGAAGACGTTTCAACCCTGTCGCCGGCATTGTCCGAGCTTCATGCTCCACATTCTGGTACCGACGGTTTGATGGAAGATATTCCTGCTACTGACCTGCAGGATATGCCGGAAACCGTTCTTCCGGCAGCAGAGGCGCCTACAGGGCACCTTCCCGTGGATCCGAATCAGCCGACAGTGGCCGCGGAACAGCCGGTGAAGCGAAAGCGAGGACGGAAAAAGAAGCTGCCGCCGCAACCCGCTCCACCGGATCCTGCAGGCGGCCTGCGAGTTCTTCGGCGGAAGGCTAGGTCATGTGTCTACAACGAGAAGCTGATGGACAACATTCTCCAGATGCAGATCGACGACATGGAGGCCAAGGCGGAGATCAAGCGCCGCAAGCTCGCCGACCTCACGAAGGAGCTGGAGATTGAGGCAATGATTGCGCACTCCGTTGGCTTCTCTTCCGACTCCTTGTCAGAGGAGGAGATCGAATTCGGGGTGCTAGAATCGACCGGCGGTATCGATCAGGCGAACTACATAGTCGTCCGCAACCACATACTCACGAGGTGGAGATCGAACGTGACTGTCTGGTTGACGGAGGACCGCATCTTCGAGTCGATTCGGAGGGCTCACCGGTCGCTCGTGAGCTCTGCCTATGCCTTCCTTCTTGCCCATGGCTACATCAACTTCGGAGTTCAACCACCCGTCCGGGAGGCTAAGGTTCGGGCCAACGTGCTGATTGTGGGGGCGGGGCTTGCAGGTCTGGCAGCAGCAAAGCAGCTGAGGTTTCTAGGTTTCAAGGTCGCGGTCATCGAAGGGAGGAACCGAGCTGGCGGACGCGTCTTCACAAAGAAGATGGCAGGAGATGGAGTGATGGCCGCTGCCGATCTTGGAGGGAGCGTACTTACGGGAATCAACGGGAATCCTCTCGGCGTCATGGCTCGGCAGCTAGGACTTCCTCTTCATAAGGTTCGTGACCAGTGCCCTCTGTACCGGCCGGATGGGAAGGCGGTGAACGCAGATGTCGATGCCAAGGTGGAAGAGCTCTTCAATGGTCTGCTTGACAAGGTTTGTAAGCTTAGACAAGCTATGGGCGAGATTGCATCAATTGATGTTTCTCTTGGTGTTGCTCTTGAGACTTTCCGGCGAGTGTATCAGGTTGCAGAGGATAAAGAGGAAATGATGCTACTGAATTGGCATTTAGCGAATTTGGAGTATGCAAATGCTGGCCTTCTATCGAACCTTTCTCTTGCATTTTGGGATCAAGATGACCCGTATGAGATGGGTGGGGATCATTGCTTCATACCTGGAGGAAATGAGAGGCTTGTGAGAGTCCTGGTTGAGAATTTGCCGGTCTTCTACGGGAGAGCGGTGCAGGAGATACGTTATGGGTCAGATGGTGTTCTCGTTGTTGCCGGAGGGCAGGTTTTCCGCGGTGACATGGTTCTCTGCACTGTTCCACTAGGTGTGCTAAAGAGTGGCTCAATAAAGTTTGAGCCTGAGCTTCCACAGATGAAAAAGGACGCCATTGCGAGGTTGGGATTTGGGTTGTTGAACAAGGTGGCGATGCTGTTTCCCCATGTATTCTGGAGTGGAGGTATTGACACTTTTGGTCACCTGACGGAGGAGCCGAGACAGCGAGGCGAATTCTTTCTGTTCTATAGCTACGCATCTGTGTCAGGAGGGCCTCTGCTGATTGCTTTGGTAGCGGGAGAATCCGCCATTAACTTCGAGGACATGCCTCCAGGCGATGCTGTGAAGAGAGTCCTTGAGGTCTTGAGAGGGATATTTACTCCCAAAGGAATTGAGGTTCCGGATCCAATTCAGGCAGTTTGTACACGCTGGGGCAAGGATAAGTTCACTTATGGCTCCTACTCCCATGTTGCAGTAGGCTCATCCGGCGATGACTATGATATCCTAGCAGAAAGTGTCGGAGGTGGGAGGGTATTTTTCGCTGGGGAGGCCACTAATAGACGGTATCCTGCTACAATGCACGGCGCTCTCCTCAGTGGACTGAGGGAGGCTGCTAACATTTCAAGAGCTGCATCCCGGAGGGGAATCTCAGTCCAAGCAGAGCAAATTAGAGGGGAAGGGGTCGAGGAATCAGTTCTGGCGGATCTTTTTCTTAGTCCTGATATGACGTTTGGGAATTTCTCTGTTTTGTTTGATCCAACATGTGATTATCCTGATGCGGTTTCGTTGCTGAGGTTGTCGGTTGGGGGGAAAACTTGCAGCGTAAAGCCTGAATCTGGCAACGATGATGTTAAGGGGTCGCATGCACCTCTTTCTCTATATTCTTTGATACCTAAGTCACAGGCTTTGGAGTTGAGTAATGTTCAAGGCGATGATAATCGAGTAAGGTTCCTGTTCGAGAAATTTGGTGCAAGGTTAGTCGGCCGGAGAGGATTGGGCAGTTCGGGTGATAAGTTTATCGCTGCAGTGCAGTCTTCTCGACCCAAGGTTGGTCTAGCTGATGCACCTTCGTAA
Protein Sequence
- >NC8G0218200
MDEGRDTTAEASSAGRPSPENPPHGLFSQPEISPPVPFTSPAHPLLDEGESRGALGTFNTDQRPIPENAISTPLMTPEIRGLPEDSSSVPGTASQAVPQPAAEGPFPLDTRESSENMLSDSLTTTEDVSTLSPALSELHAPHSGTDGLMEDIPATDLQDMPETVLPAAEAPTGHLPVDPNQPTVAAEQPVKRKRGRKKKLPPQPAPPDPAGGLRVLRRKARSCVYNEKLMDNILQMQIDDMEAKAEIKRRKLADLTKELEIEAMIAHSVGFSSDSLSEEEIEFGVLESTGGIDQANYIVVRNHILTRWRSNVTVWLTEDRIFESIRRAHRSLVSSAYAFLLAHGYINFGVQPPVREAKVRANVLIVGAGLAGLAAAKQLRFLGFKVAVIEGRNRAGGRVFTKKMAGDGVMAAADLGGSVLTGINGNPLGVMARQLGLPLHKVRDQCPLYRPDGKAVNADVDAKVEELFNGLLDKVCKLRQAMGEIASIDVSLGVALETFRRVYQVAEDKEEMMLLNWHLANLEYANAGLLSNLSLAFWDQDDPYEMGGDHCFIPGGNERLVRVLVENLPVFYGRAVQEIRYGSDGVLVVAGGQVFRGDMVLCTVPLGVLKSGSIKFEPELPQMKKDAIARLGFGLLNKVAMLFPHVFWSGGIDTFGHLTEEPRQRGEFFLFYSYASVSGGPLLIALVAGESAINFEDMPPGDAVKRVLEVLRGIFTPKGIEVPDPIQAVCTRWGKDKFTYGSYSHVAVGSSGDDYDILAESVGGGRVFFAGEATNRRYPATMHGALLSGLREAANISRAASRRGISVQAEQIRGEGVEESVLADLFLSPDMTFGNFSVLFDPTCDYPDAVSLLRLSVGGKTCSVKPESGNDDVKGSHAPLSLYSLIPKSQALELSNVQGDDNRVRFLFEKFGARLVGRRGLGSSGDKFIAAVQSSRPKVGLADAPS