Information report for NC10G0232840
Gene Details
|
|
Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Gossypium hirsutum: Gohir.D07G138400
- Juglans regia: Jr07_10040
- Manihot esculenta: MANES_05G015200
- Musa acuminata: Ma08_g12120
- Oryza sativa: LOC_Os03g02970, OsDCL1a
- Populus trichocarpa: POPTR_002G181400v3
- Setaria italica: SETIT_033853mg
- Setaria viridis: SEVIR_9G565900v2
- Vitis vinifera: VIT_15s0048g02380
Sequences
CDS Sequence
- >NC10G0232840
ATGCAGGAGACAATTGCAAAATTTCGGGATGGTCGTGTTACTTTATTGGTGGCTACTAGTGTAGCAGAGGAAGGCCTGGACATTCGGCAGTGTAATGTTGTTATTCGTTTCGACCTTGCTAAAACAGTTTTAGCATATATACAATCTAGGGGTCGGGCAAGAAAACCTGGATCTGATTACATATTGATGCTGGAGAGGGGCAATCTGTCACATGAAACATTCTTGAGAAATGCACGGAATAGTGAGGAAACTTTGCGAAAGGAAGCAATTGAAAGAACTGACCTTAGTCACCTTAAGGGTAATTCAAGGTTCATTTCAGTTGATACAGCACCTGGATCAATCTACCAGGTTGAGTCAACAGGTGCTGTTGTCAGTCTGAACTCAGCAGTTGGGCTTATCCATTTTTACTGCTCTCAGCTGCCAAGCGATAGGTACTCGATTCTTCGTCCTGAGTTTATCATGGAACGCCATGAGAAACCTGGAGGTTCTACTGAATACTCGTGCAAGCTTCAACTTCCTTGCAATGCTCCATTTGAAAAGCTCGATGTTTGTTTGGCGGCTTGCAAGAAGCTCCATGAGATGGGAGCATTCACTGATATGCTTTTACCAGACAAGGGGAGCAGTGAGGAGGCAGAGAAGGTTGATCTGAATGAAGAAGAGGATCCACTTCCTGGAACTGCCAGGCACAGGGAGTTCTATCCTGAGGGTGTGGCAGAGATTCTACGGGGAGACTGGATTCTGATTGGAAGGGATGGTTGTAATGATTCGAACTTGGTTAAATTGTATAGGTATGCAATAAACTGTGTGAATACTGGGGCCTCAAAAGACTCGTTTGTGACACAAGTATCAGATTTTGCTGTACTGTTTGGTTCTGAGCTTGATGCAGAGGTCTTCTCAATGACGATGGATCTCTTCATTGCTCGAACCATGGTGTCAAACGTTTCTCTTGTCTTCCAGGGTCCCATAGAGATAACAGAACGAGAGCTGGTTTCACTGAAGAGCTTCCATGTAAGGTTGATGAGTATTGTGCTGGATATAGATGTTGAACCCTCAACAACTCCTTGGGATCCTTCAAAAGCATATTTATTTGTACCAGTTGTTCAACAGCATCTTCATCTGATGGAAGAACTTGACTGGGATCTTGTTTATAAGATAATTGACACAGATGCCTGGAAAAATCCCCTTCAGAGGGCTCGCCCAGATGTTTATTTGGGTACAAATGAAAGAACTCTGGGCGGGGACCGAAGAGAATATGGATTTGGGAAATTACGGTATGGTATGGCATTTGGGCAGAAATCACATCCTACTTATGGGATTAGAGGTGCAATTGCACAATTTGATGTTGTAAAAGCTTCTAAATTGGTTCCCACTCGCGATATCTTTGAAAGCGAGTTGAATGGAGTTCCACCACATGGGAAATTGGTCATGGCAGATTCTATCATTGATGCAAGTGATTTAGTGGGAAGAATTGTGACTGCTGCACACTCTGGCAAGAGGTTTTACATTGATTCTGTGCGTTTTGACATGAACGCAGAAAATTCATTCCCCAGGAAGGAGGGCTACTTGGGCCCACTGGAGTACAGTTCCTATGCTGAATACTATAAGCAGAAGTACGGGGTGCAATTATTGTGCAAGAAGCAACCTCTCATAAGAGGACGAGGTGTATCATACTGCAAGAATCTTCTCTCTCCGAGATTCGAGTCATCAGAAGCTGCGGCTGGAGAGGCTGAAGACATGCTAGATAAGACATACTATGTGATGCTACCTCCTGAACTCTGTTTGGTTCACCCTCTGCCAGGATCTCTTGTTCGAGGTGCCCAACGATTACCTTCAATAATGAGGAGAATAGAGAGCATGCTACTTGCGATCCAATTAAAGGGTTTGATTGGATATCCCATTCCTGCTTCTAAGATCCTGGAGGCACTTACTGCAGCTTCATGTCAAGAGACTTTCTGCTATGAAAGGGCTGAGCTCTTAGGAGATGCTTATCTTAAATGGGTAGTCAGTAAATTTCTTTTTCTCAAGTACCCTCAGAAACATGAAGGGCAGCTAACTAGAATGAGGCAACAGATGGTGAGCAATATGGTACTGTATCAGTATGCATTGGGCAAAGGGCTGCAATCATACATTCAAGCAGACCGCTTTGCCCCATCTAGATGGGCTGCACCTGGGGTACTGCCTGTTTTTGATGAAGATACCAGAGAAGTATCGTCATCCTTGTTTGGCCCAGAATGCTCTGATGCAGAAAAGGAACCATCAGAGAGTTCATATAGTGATGGTTTTGAGGATGATGCAATGGAAGATGGTGAAATAGAGAGTGATTCAAGCTGTTACAGAGTACTATCTAGCAAGACATTAGCTGACGTAGTGGAAGCATTGATTGGTGTTTACTATGTTGAAGGGGGAAAGAAGGCAGCTAACCACTTCATGAGTTGGATTGGTATCCCTGTGGACTTCAGTCCACAGGAAATACCTCCCCACTGTACAGTTCCTGACAGTATCATGAGGAGTGTGGACTTTGATGCATTGGAAAATGCACTCAGCATAAAGTTCGAAAACAAAGGATTGTTGGTGGAAGCGATTACTCATGCTTCACGTCCTTCATCTGGCGTCTCTTGTTACCAGCGTCTGGAATTTGTTGGGGATGCTGTTTTAGATCATCTGATAACACGTCATCTTTTTTTTGCGTATACGGATCTTCCACCGGGTCGTTTAACTGATCTACGAGCTGCAGCTGTAAACAATGAGAACTTTGCTAGGGTTGCTGTGAAGCATAAGCTACATGTACATCTTCGTCATGGATCAAGTGCACTGGAAACACAGATCCGTGAATTTGTGAAGGATGTCCAAGATGAGCTTAGTAAACCAGGGTTTAATTCCTTTGGTATTGGAGATTGCAAAGCACCAAAAGTACTTGGTGATATTGTGGAATCTATTGCTGGTGCAATTTTCCTGGATAATAACCTTAATACTACTATTGTTTGGAAGGTAAAATCAAAGTCTACACTTATGCTTTTGGTTTTGGTTATGTTTGCTGACATGTTACCTTTGTACCTGAAGGTATTTCAACCATTATTAAATCCAATGGTGACACCAGAAACACTTCCCATGCATCCAGTTCGCGAACTTCAAGAACGCTGTCAGCAGCAGGCAGAGGGTCTGGAGTACAAGGCTATACGAACTGGTAATATAGCTACCGTTCAGGTCTTCATAGATGGGATTCAAATTGGCGTTGCTCAGAATCCGCAAAAGAAAATGGCACAGAAGTTGGCAGCAAGAAATGCACTTGTTGTTCTGAAAGAGAAGGAGGCGGAGTCCAAGGAAAAGTATGCAGAAGATGGGAAGAAGAAAAATGGTGTCCAGACGTTCACCAGACAAACTCTCAACGATATCTGTCTAAGGAGACAGTGGCCTATGCCTCAATATAGGTGCGTCAATGAAGGTGGCCCAGCCCATGCAAAGCGGTTTACTTATTCTGTGCGTGTGAATACAACAGATCGAGGTTGGACTGATGACTGTGTTGGGGAGCCAATGCCCAGTGTGAAGAAGGCAAAGGACTCCGCTGCAGTGATTTTGTTAGAACTTCTAAACAGATGGTAT
Protein Sequence
- >NC10G0232840
MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNLSHETFLRNARNSEETLRKEAIERTDLSHLKGNSRFISVDTAPGSIYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGSTEYSCKLQLPCNAPFEKLDVCLAACKKLHEMGAFTDMLLPDKGSSEEAEKVDLNEEEDPLPGTARHREFYPEGVAEILRGDWILIGRDGCNDSNLVKLYRYAINCVNTGASKDSFVTQVSDFAVLFGSELDAEVFSMTMDLFIARTMVSNVSLVFQGPIEITERELVSLKSFHVRLMSIVLDIDVEPSTTPWDPSKAYLFVPVVQQHLHLMEELDWDLVYKIIDTDAWKNPLQRARPDVYLGTNERTLGGDRREYGFGKLRYGMAFGQKSHPTYGIRGAIAQFDVVKASKLVPTRDIFESELNGVPPHGKLVMADSIIDASDLVGRIVTAAHSGKRFYIDSVRFDMNAENSFPRKEGYLGPLEYSSYAEYYKQKYGVQLLCKKQPLIRGRGVSYCKNLLSPRFESSEAAAGEAEDMLDKTYYVMLPPELCLVHPLPGSLVRGAQRLPSIMRRIESMLLAIQLKGLIGYPIPASKILEALTAASCQETFCYERAELLGDAYLKWVVSKFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALGKGLQSYIQADRFAPSRWAAPGVLPVFDEDTREVSSSLFGPECSDAEKEPSESSYSDGFEDDAMEDGEIESDSSCYRVLSSKTLADVVEALIGVYYVEGGKKAANHFMSWIGIPVDFSPQEIPPHCTVPDSIMRSVDFDALENALSIKFENKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFAYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQDELSKPGFNSFGIGDCKAPKVLGDIVESIAGAIFLDNNLNTTIVWKVKSKSTLMLLVLVMFADMLPLYLKVFQPLLNPMVTPETLPMHPVRELQERCQQQAEGLEYKAIRTGNIATVQVFIDGIQIGVAQNPQKKMAQKLAARNALVVLKEKEAESKEKYAEDGKKKNGVQTFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFTYSVRVNTTDRGWTDDCVGEPMPSVKKAKDSAAVILLELLNRWY