Information report for MELO3C006101
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Citrullus lanatus: Cla97C05G081810
- Cucumis sativus: CsGy3G008780
- Glycine max: Glyma.07G069400
- Gossypium hirsutum: Gohir.A11G090000, Gohir.D11G094400, Gohir.D12G111700
- Manihot esculenta: MANES_05G032800, MANES_01G255300
- Populus trichocarpa: POPTR_014G086500v3, POPTR_002G160900v3
- Prunus avium: Pav_sc0000254.1_g1560.1.mk
- Prunus persica: PRUPE_2G172900
- Rosa chinensis: RchiOBHm_Chr1g0356661
- Vitis vinifera: VIT_15s0046g02290
Sequences
CDS Sequence
- >MELO3C006101
ATGGGATCCCCAGTTTCTGTGGGAATGAGTGGACAGGGGGGAGGGGTCCATCTTGCGAAGTGGGAGGTAATGGCATTGATTGCTTATTTGATGGAATTTAAAGGGAACTATGGCCCCCATCTTATAATTGTCCCCAATGCTGTTTTGGTCAACTGGAAGAGTGAGCTCCATACTTGGCTACCATCCGTATCGTGCATTTATTATGTTGGTGGGAAGGATGAGCGGTCAAAATTATTTTCACAGGAGGTTTGTGCCTTGAAATTTAATGTTCTCGTGACAACTTATGAGTTTATCATGTATGATCGCTCAAAGCTTTCAAAAATTGATTGGAAGTATATTATAATTGATGAAGCACAAAGAATGAAGGACAGGGAATCGGTTTTAGCTCGTGACCTTGATAGGTACAGATGTCAGAGGCGCCTGCTCCTAACTGGGACACCGTTACAGAATGATTTGAAGGAACTTTGGTCGCTTCTTAATCTCCTTCTTCCGGAAGTGTTTGATAATCGAAAAGCTTTTCATGATTGGTTCTCAAAACCCTTTCAGAAGGAAGGCCCCACTCCGAATGCTGAAGATGATTGGCTTGAGACCGAGAAAAAAATTATTATTATCCACCGACTTCATCAAATTCTTGAGCCATTTATGCTCCGTCGCCGTGTTGAAGATGTTGAAGGATCACTTCCACCAAAGGTTTCCATAGTGTTGAGGTGTAGGATGTCAGCCTTTCAGAGTGCTGTATATGACTGGATTAAGGCCACTGGCACTCTTCGTGTTGATCCGGAAGATGAGAAACTGAGAGTTCAGAAAAATCCGAATTACCAGCCTAAAGTGTATAAAACATTAAATAACAGATGTATGGAACTAAGGAAAACTTGTAACCACCCGTTGCTTAACTATCCATATTATGGTGACTTCTCCAAGGACTTCCTGGTAAGATCATGCGGAAAACTGTGGATCCTGGACAGGATCCTTATAAAACTCCAGAAGACAGGGCATAGAGTACTGCTTTTTAGTACAATGACAAAACTACTTGATATATTAGAGGAGTACTTGCAATGGCGGCGACTCATATATAGAAGGATTGATGGTACAACTAGTTTGGAGGATCGTGAGTCTGCCATAGTGGACTTCAATAGTCCTGATTCAGACTGCTTTATATTCTTGCTGAGTATACGGGCTGCAGGTCGTGGTCTTAATCTTCAGTCTGCTGACACAGTTATTATTTATGATCCTGATCCTAACCCTAAAAATGAGGAGCAAGCTGTTGCTAGAGCACATCGTATTGGACAGACAAGAGAAGTCAAAGTCATCTACATGGAAGCAGTGGTCGATAAGATCTCTAGTAATCAGAAAGAAGATGAGCTAAGAAGTGGTGGGTCTGGAGATTTAGAAGATGATTTTGCTGGTAAGGATCGATATATGGGATCGATTGAGAGTCTTATAAGAAATAACATACAGCAGTATAAGATAGATATGGCAGATGAGGTCATCAATGCTGGGCGTTTTGATCAGAGAACAACGCATGAAGAGAGGCGTCTAACTTTAGAGACATTGTTGCACGATGAAGAGCGATATCAAGAAACTGTCCACGATGTTCCTTCACTTCAGGAGGTGAATCGAATGATTGCTAGAAGTGAAGATGAGGTTGAACTGTTTGATCAAATGGATGAAGAGTTTGATTGGACAGAAGAAATGACACGGTATGATCAGATACCTAAGTGGCTTCGAGCAAGTACAAGAGAAGTAAATAATGCTATTGCTAATCTATCCAAAAAACCTTCAAAAAATATATTATTTGGTGCTGGTTATGGTTTGGAATCCAGTGAACTTGGGTCTGATTCATCCCTCAGAACTGAAAGAAAAAGAGGCAGACCAAAGGGTAAGAAGATCCCTAATTACAAGGAAATGGATGATGATAATGGAGAGTTCTCAGAAGCAAGCTCTGATGAGAGAAATGGGTACTCTGTCCAGGAAGAAGAGGGAGAAATTGCAGAGTTTGAAGATGATGAATATAGTAGAGGCATTGAGGCAACGCAACTTAACAAGGATCAGATGGAAGATGGTCCTGATTGCGATGCTAGCAGTCGAAGGTTGACACAGATAGTGTCTCCTGTTTCTTCTCAGAAATTTGGTTTCTTGTCTGCCTTAGATGCCAGGCCTAGTTCCCTTTCAAAGAGACTGCCTGATGAACTAGAGGAAGGGGAAATTGCAATATCTGGCGACTCTCACATGGAGAACCAACAATCTGAAAGTTGGATTCATGATCGGGAAGATGGTGAAGAGGAACAGGTACTGCAACCCAAGATAAAACGTAAGAGGAGTCTTAGGCTTAGGCCACGCCCTCCAGCAGAAAGGCGAGAAGAGAAGATTTATAATGAAACCCAATCTCTTCAGTATGGAGATTCTTCATCTCCTTCTCCCTTTCTAGCGGACCATAAATTTTCCAAATTTAAGAATGATCCCGAGGCTAAACCATATGGGGATTCCAATACCTCGAAGCATGAACAAAACGAATCATCTTCGAAGACTCGGCGTAATTTGTCTGCTAGAAGGGTGGCTCCTTCATCAAAACTGCATTCGTCTCCTAAATCTAGCAGATTGAATTCTTTGACTGGATCTGCAGATGATGCTGTTGAACATTCTAGAGAAAATTGGGACGGGAAACAATCAAACGCTGGTGGAAATTCAGGTTTTGGTTCTAAGATGCCTGACATAATCCAGAGGAGGTGTAAGAATGTTATCAGCAAGCTTCAAAGTAGAATTGACAAAGAAGGGCATCAAATTGTGCCGTTGTTAACAGATCTGTGGAAACGGATGGGGAATTCTAGTTTACCAAGTGGAGTCAGTAATAACATCTTGGATCTACGGAAGATTGATCAACGCATAGACAGATTAGAGTACAATGGAGTTATGGAGTTGGTGTTTGATGTTCAGTTTATGTTGAAGGGTGCCATGCAGTTCTATGGGTTCTCATATGAGGTAAGATTCGAGGCTAAAAAAGTACATGACCTCTTCTTTGACATTCTGAAGATTGCATTTCCAGACACAGATTTTCGAGAAGCTCGAAATGCTCTGTCTTTCTCAAGTCCTGGGTCTTCTGCTGCTGCTACAATGAGGGAAAGACCTGCTGGCCAAAGCAAAAGACAAAAGATGATGCATGAAATGGACACTGACTCAGGTCCACCGCATAAGTCCCAGCATCGTGGACCTGTGTCTGGGGAAGAAACGAGGGCCACCAGAGGTCATCTAATGGCACAGAAAGAATCGAGATTTGGTAGTGGAAGTGGAAGTAAGGATCAATATCAGATAGAAGAACCCCCGCTTCTTACTCATCCTGGGGAGCTAGTTATCTGCAAGAAGAAAAGAAAAGACAGAGAAAAATCAATAGTCAAGCCAAGGACTGGATCTGGTGGCCCGGTCTCACCGCCACCTAGCGGTGCTCGTGGTATTAGAAGTCCAGGTCTCAGTTCAGTTCCGAAAGACAGCAAACAATCTCAGGGATGGCCCAACCAGCCTCAATCTGCCAACGGCAGCGGTGGTGGACCTGTCAGTTGGGCAAATCCTGTGAAGAGATTAAGAACAGATGCTGGAAAGAGGAGGCCCAGCCATATCTGA
Protein Sequence
- >MELO3C006101
MGSPVSVGMSGQGGGVHLAKWEVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDERSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPTPNAEDDWLETEKKIIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAFQSAVYDWIKATGTLRVDPEDEKLRVQKNPNYQPKVYKTLNNRCMELRKTCNHPLLNYPYYGDFSKDFLVRSCGKLWILDRILIKLQKTGHRVLLFSTMTKLLDILEEYLQWRRLIYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKISSNQKEDELRSGGSGDLEDDFAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDEEFDWTEEMTRYDQIPKWLRASTREVNNAIANLSKKPSKNILFGAGYGLESSELGSDSSLRTERKRGRPKGKKIPNYKEMDDDNGEFSEASSDERNGYSVQEEEGEIAEFEDDEYSRGIEATQLNKDQMEDGPDCDASSRRLTQIVSPVSSQKFGFLSALDARPSSLSKRLPDELEEGEIAISGDSHMENQQSESWIHDREDGEEEQVLQPKIKRKRSLRLRPRPPAERREEKIYNETQSLQYGDSSSPSPFLADHKFSKFKNDPEAKPYGDSNTSKHEQNESSSKTRRNLSARRVAPSSKLHSSPKSSRLNSLTGSADDAVEHSRENWDGKQSNAGGNSGFGSKMPDIIQRRCKNVISKLQSRIDKEGHQIVPLLTDLWKRMGNSSLPSGVSNNILDLRKIDQRIDRLEYNGVMELVFDVQFMLKGAMQFYGFSYEVRFEAKKVHDLFFDILKIAFPDTDFREARNALSFSSPGSSAAATMRERPAGQSKRQKMMHEMDTDSGPPHKSQHRGPVSGEETRATRGHLMAQKESRFGSGSGSKDQYQIEEPPLLTHPGELVICKKKRKDREKSIVKPRTGSGGPVSPPPSGARGIRSPGLSSVPKDSKQSQGWPNQPQSANGSGGGPVSWANPVKRLRTDAGKRRPSHI.