Information report for Medtr8g464450
Gene Details
|
|
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.
Homologous
- Actinidia chinensis: CEY00_Acc21695
- Beta vulgaris: BVRB_4g087230
- Daucus carota: DCAR_009981
- Glycine max: Glyma.06G250100
- Juglans regia: Jr09_14540
- Manihot esculenta: MANES_03G115600
- Populus trichocarpa: POPTR_011G127600v3
- Prunus avium: Pav_sc0002607.1_g020.1.mk
- Prunus persica: PRUPE_4G188600
- Rosa chinensis: RchiOBHm_Chr5g0035141
- Vitis vinifera: VIT_19s0014g03430
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A072TPZ6
- EMBL: CM001224 , PSQE01000008
- AlphaFoldDB: A0A072TPZ6
- KEGG: mtr:25502558
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF373
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A072TPZ6
- STRING: 3880.A0A072TPZ6
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >Medtr8g464450
ATGGCAACTCCTTCTTCTTCAGATGGATCTGTTTCAAGGCGTATGTCGTTGAGAAAGAAAGTGAATCATCGTAGTTACGACGAGGGTTTGATAGATGATGACCTTTTTGATAAGAGTTTGGATAGTGGTTTGAAGAAGAAGGGTAAGAGTAAAGATATTCAGAAAGAAACCAACACCGAGGCTATGATTGCCTTTTCACTTGGTTTCCCAATGAATGCTTTGCTTGAGCATGAGATTAGATCTGGGGTTGTCTCAGAATTAGGCGGGAAAGAGCAGAATGATTATGTTGTTGTTAGGAATCATATATTGGCTCTTTGGAGGGGGAATGTTAGGAGGTGGTTGACGAAGGGACAAATTAGGGAAACTGTGACCAAGGAGTTTGAACATTTGATTAATTCTGCTTATGACTATCTTTTGTATAATGGTCATATCAATTTTGGGGTTTTGCCATCATTTACTTCTCAGTTGCCTGAGGCGACGGAAGGAACGGTTGTTGTTATTGGGGCTGGCCTTGCTGGGTTGGCTGCAGCGAGGCAGCTTTTGTCGTTTGGTTATAAGGTTGTTGTTTTGGAAGGTAAGAACCGTCCTGGTGGTAGAGTTTATACTCAGAAGATAGGGAATGAGGATAAGTTTGCGGCCTTAGATCTTGGTGGGAGCGTAATTACTGGAATTCATGCTAACCCTTTAGCGGTTTTGGCACGACAGCTTTCAATTCCGCTTCATAAAGTTAGAGACAATTGCCCTTTATTCAAGCCGAACGGGGAGCCGGTCGATAAGGAAATAGATTCAAAGGTTGAGAATATATTCAACAAGTTGCTTGATAAAGTTATGGAACTCAGGAAAATTATGGGTGGCTTTGCAAGTGATACCTCACTTGGTTCAGTCTTGGAGACACTCAAGAATTTATATGCGGTGGCTCAAACTACTGATGAGAAGCAGATGTTTGATTGGCATCTTGCAAATTTAGAATATGCAAATGCTGGATGTCTTTCAAATCTTTCAGCTGCCTATTGGGATCAGGATGATCCTTACGAAATGGGTGGTGATCATTGTTTTCTTGCTGGAGGAAATTGGAGATTGATAAAAGCTATGTGTGAAGGAGTTCCTATTTTTTATGAAAAGACCGTCAACACTATCAGATATGGAAATGAGGGTGTTGAGATTATTGCTGGGGATCAAGTCTTTCAAGCAGACTTCACCTTATGCACCGTGCCTCTTGGAGTTCTGAAAAAAAAGGCCATTAATTTTGAACCTGAATTACCTGCAAGAAAACTCGAATCAATTGAGAGGATGGGTTTTGGGCTTCTGAACAAAATTGCAATGGTTTTTCCACATGTGTTTTGGGGGGAAGATCTGGACACATTTGGATGTCTCAACGAAAATAGTCATGATCGTGGGGAGTTCTTTTTATTTTACGGTTACCACACTGTTTCTGGTGGCGCAGGACTTATTGCGCTTGTGGCTGGTGAAGCTGCACAAGCATTTGAAACCACAGATCCAATCGTCTTACTTCATCGGGCTTTGAATACTCTAAAAGGTATTTTTCAACCTAAAGGCATCACTGTGCCTGATCCAATACAATCAATTTGTACCAGATGGGGAAGCGATCCCCTTTCTTATGGTTCATACTCTCATGTTAGTGTGCAATCATCTGGTAAAGATTATGATATACTTGCAGAAAACGTGGGGAACCGACTGTTCTTTGCAGGTGAGGCCACTTGTAGGCAATATCCAGCCACTATGCACGGTGCTTTCATGAGTGGCTTGAGAGAAGCTTCACGCATTTACCAATTAACCCGTGTTCAGCAACCTTGTCCTAAGAAGTCCCTGTCCAAGAATATAGGAACCAGCAGCGGTACTTTGGTTAATTTATTCAAGAGGCCTGATTTGGAATCTGGGAATTTCGCTTTCATATATGATCCTTTCTCAGAAGATCCGCAGTCGAAAGCGATTCTGCAAATGACATTTGGTGGTACCGAAGAAAGTTACAAGGAGGAGATATTAAACTGCTATCCCAATACCACAAAGTTGCCGTTGCAGCTTTACACTATTTTATCCCGTGAACAGGTGGATCAAGTGCAGCAAATTACCGAAGGAGATGAAAATAGGTTGTCATATTTGACAGAAAACCTAGGTTTGAAGCTAATGGGATTAAGTGCTTTACTCATTGCTGGTAATGACGTAATAGCTAGCATTGCTGGCTCCCGAAAAGGAAGGAGGAACCGAACAATTACCTCGCAACCCGGTGACCCAAAGAAGTAG
Protein Sequence
- >Medtr8g464450
MATPSSSDGSVSRRMSLRKKVNHRSYDEGLIDDDLFDKSLDSGLKKKGKSKDIQKETNTEAMIAFSLGFPMNALLEHEIRSGVVSELGGKEQNDYVVVRNHILALWRGNVRRWLTKGQIRETVTKEFEHLINSAYDYLLYNGHINFGVLPSFTSQLPEATEGTVVVIGAGLAGLAAARQLLSFGYKVVVLEGKNRPGGRVYTQKIGNEDKFAALDLGGSVITGIHANPLAVLARQLSIPLHKVRDNCPLFKPNGEPVDKEIDSKVENIFNKLLDKVMELRKIMGGFASDTSLGSVLETLKNLYAVAQTTDEKQMFDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCFLAGGNWRLIKAMCEGVPIFYEKTVNTIRYGNEGVEIIAGDQVFQADFTLCTVPLGVLKKKAINFEPELPARKLESIERMGFGLLNKIAMVFPHVFWGEDLDTFGCLNENSHDRGEFFLFYGYHTVSGGAGLIALVAGEAAQAFETTDPIVLLHRALNTLKGIFQPKGITVPDPIQSICTRWGSDPLSYGSYSHVSVQSSGKDYDILAENVGNRLFFAGEATCRQYPATMHGAFMSGLREASRIYQLTRVQQPCPKKSLSKNIGTSSGTLVNLFKRPDLESGNFAFIYDPFSEDPQSKAILQMTFGGTEESYKEEILNCYPNTTKLPLQLYTILSREQVDQVQQITEGDENRLSYLTENLGLKLMGLSALLIAGNDVIASIAGSRKGRRNRTITSQPGDPKK*