Information report for Medtr8g076100
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc24462
- Brachypodium distachyon: BRADI_1g00517v3
- Glycine max: Glyma.02G049800
- Manihot esculenta: MANES_02G102500
- Musa acuminata: Ma04_g22690
- Nicotiana attenuata: A4A49_31260
- Solanum lycopersicum: Solyc02g062270.3
- Solanum tuberosum: PGSC0003DMG400019934
- Vitis vinifera: VIT_04s0023g03150
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: G7LCY9
- EMBL: CM001224 , PSQE01000008
- AlphaFoldDB: G7LCY9
- KEGG: mtr:11411325
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: G7LCY9
- CDD: cd00590
- eggNOG: KOG0117
- STRING: 3880.G7LCY9
Sequences
CDS Sequence
- >Medtr8g076100
ATGAGAACTCGAAATGCTGATTCATCTTCGAAATCCACAACCCCTAAGAAAACACCGCCGGCGAGAAAATCCGCCGGAGAATCTCCCGCCGCAAAACGCACTCCTCCTTCAAAACCCAAAAACGCTAAGAAGACGGAAGCATCGCCCGCAACCGATCCAGATCAATCTCAGAAGAAGAAATTATTAGCTAGTGCTACCACTGCAAAATCTGGGAAGTGGAAATCACCGGGGAAACCGCGAACAAAAGTGGTTGCCGTCACTCCGAATTTGGAAGAGAAATTGGAGGTAGAAGCTGATGAAACTACAGTTATAGATAAAGTGGAAGAAGTTGGAAATGTTAACGACATCGATGCAGATACTATGGAGTGTGAAAAAGAGGGGGAACAGAAGCCGATGGAAGTGGATCAACCTGTTGTTGAAAAAGTTTGTGAATTGGTCGAAAAGGGAAAGAGCACAGTAGAGGTTGAACCAATTTTTTCTCAGGATGGTTCGATTTCTTTGAAACAACCAGGTTGCACCCTTGTGGACCTTAATATTTCTGCTGCCGATAATGAAGATTATACTGGTGTGAAGGAGGGAGGGGAAACGTTGAAAGAGGAAGAGTTGACTGTACAAGAGGGAGAGAGAGGAAAGGAAGAGTTGAAAGCACCGGAGGGAGAGAGAGGAACGGACAAGTTGAAAGCACAGGAGGGAGAGAGAGGAACGGACAAGTTGAAAGCACATGAAGGAGAAAAAGGAACGGACGAGTTGAAAGAACAAGGAGAGAATGGAAAAGAAGAGTTGGACCAACAAAAAAGCGAGAAAGAAATGGAAGAGTTTAAAGCAGTGGAAGGAGAAGAAGGAAAGGAAGAGCTGAAAGAATCAGTAGGAGATAAAGAAAAAGAAGAGTTAAAAGAACATGGAGAGAAAGGAAAGGAAGAGTTAAAAGAAGAGGATCTAGAAAACACAAAAGGAGAGGAAGCAAACATTATTGGACATGAAGAGCATTCCAGTGTAGAAGTACAAGCCCAGCTGCAAAAAGACGTTGATCTCAAAAATTATGGTGTTGAAAGGGCAAAGAGTGGCGAATCGATAGATCTTGGGGAACAAGAGAGGGTGCAGCTTGAGGATGAAGATCCAGAGGAAGATCCAGAAGAAGACCCAGAAGAAGATCCTGAGGAACTGCCCGAAGACACTGAGACATTGGATGAAGAGCATGACGAGCATATGGAATTTGAAGCCATTGCAAAGCAACGAAGAATTAGGAAAGAGCATGAGATATTTGTTGGTGGATTGGATCGTGATACTACCGAGGAAGATCTGAAAAAGATTTTTCAGAGGATTGGGGAGGTACTGGAAGTCAGGTTGCATAAAAATTCTTCAACAAGTAAAAATAGGGGCTATGCTGTTGTGAGGTTTGCTAATAAGGAGCATGCAAAGAAAGCTTTGTCTGAAATGAAGAACCCTGTTATACGTGGAAAACGATGTGGCACTTCACCTAGTGAGGATAATGACACATTATTCTTGGGAAATATTTGCAATACATGGACAAAAGAAGCTGTTAAACAGAAGCTGAAGGATTATGGTGTAGAAGGGGTTGAAAACATTACACTCGTACCGGATGTTCAACATGAAGGCTTGAGCCGCGGTTTTGCTTTCCTTGAGTTTTCTTGTCATGCTGATGCCATGCTCGCATATAAGAGACTTCAAAAGCCTGGTGTCATCTTTGGTCATGCCGAGCGAACTGCTAAAGTAGCCTTTGCTGAACCGATACGTGAACCAGACCCAGAGATAATGGCACAAGTGAAGTCTGTGTTTATTAATGGTCTACCTCTTCACTGGGACGAAGATCATGTGAGGGAACATCTGAAATCTTACGGTGAGATTGTAAAAATTGTGTTGGCGAGGAAAATGTCCACATCTAAGAGGAAGGATCACGGATTCGTGGATTTTTCTACACATGAAGCCGCTTTAGCTTGTGTTGACGGTGTAAATAAATCAGAATTGGGAGATGGGACATCGAAGATAAAATTGAGAGCTAGGCTTTCAAACCCTTTGCCTAAAACGCAGGCTGTCAAGGGCGGCATGTGTGGTGGCCTCCGTATTGGTCAGGCTAGGAGTGAAGCCTACCCAAGATCCGAAAGGGGTTTTGGGCGAGGGCGGGGAAGACAGCCCTTCAACAACAGGGGAAATTTCAGCAGGGGCAGGAGTTTCAATCATCATGGGGGGCGTGGTCAAATCAGAAGAATGGGTTTTTGGGACGAACCTGATTTTAGTATGCATCCGGATTTCCATCAGCGGCAATTTGGTCCACAAGGACCTATGAGGGGCGGGCATTATGCAGCTAGTCGAGGTGGCGCTCCTTTTGCTGGTCCATCTAGACATTATCATGATAGAGCATGGTATGGTATCCCTGACGGAGGCCCCATTGAGCCTATTCCTCCAAGAAGGCCCTACTCTCCTGGTGGACAGTTTTATGGTATCCCTGATGGAGGCCCCGGTGAGCCTATTCCTCCAAGAAGGCCCTACTCTCCAGGTGGACAGTTTTATGGTATCCCTGATGGAGGCCCTGGTGAGCCTATTCCTCCAAGAAGGCCCTACTCTCCAGGTGGGCAGTTTTATCGTATCCCTGATGGAGGCCCCGGTGAGCCTATTCCTCTAAGAAGGCCATACTCTCCAGGTGGACAGTTTGACATGCCATTTATGGGAAGGCATGTTGATGATCCATATCTATATGATGACAATATGCGTGGAATCAAACGCCCATTTCATATGACTGACCCTGAACCTGATTACATCGGGCCTAATAGATTTCGCCCCCGATTTGATTATGCCGATCCATCTGTATTTCACGGAACTCAACATCATGATTATGCTGGTGCTGGCAGAGGACAGTTCCCGCCGGACTATTATGCTTCTGACCATGGTGGAGCTCCATATCCATCTTTTTATGGGGGTGAAGGCCCACATGGACACAGATACTATTATTAG
Protein Sequence
- >Medtr8g076100
MRTRNADSSSKSTTPKKTPPARKSAGESPAAKRTPPSKPKNAKKTEASPATDPDQSQKKKLLASATTAKSGKWKSPGKPRTKVVAVTPNLEEKLEVEADETTVIDKVEEVGNVNDIDADTMECEKEGEQKPMEVDQPVVEKVCELVEKGKSTVEVEPIFSQDGSISLKQPGCTLVDLNISAADNEDYTGVKEGGETLKEEELTVQEGERGKEELKAPEGERGTDKLKAQEGERGTDKLKAHEGEKGTDELKEQGENGKEELDQQKSEKEMEEFKAVEGEEGKEELKESVGDKEKEELKEHGEKGKEELKEEDLENTKGEEANIIGHEEHSSVEVQAQLQKDVDLKNYGVERAKSGESIDLGEQERVQLEDEDPEEDPEEDPEEDPEELPEDTETLDEEHDEHMEFEAIAKQRRIRKEHEIFVGGLDRDTTEEDLKKIFQRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSEMKNPVIRGKRCGTSPSEDNDTLFLGNICNTWTKEAVKQKLKDYGVEGVENITLVPDVQHEGLSRGFAFLEFSCHADAMLAYKRLQKPGVIFGHAERTAKVAFAEPIREPDPEIMAQVKSVFINGLPLHWDEDHVREHLKSYGEIVKIVLARKMSTSKRKDHGFVDFSTHEAALACVDGVNKSELGDGTSKIKLRARLSNPLPKTQAVKGGMCGGLRIGQARSEAYPRSERGFGRGRGRQPFNNRGNFSRGRSFNHHGGRGQIRRMGFWDEPDFSMHPDFHQRQFGPQGPMRGGHYAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMPFMGRHVDDPYLYDDNMRGIKRPFHMTDPEPDYIGPNRFRPRFDYADPSVFHGTQHHDYAGAGRGQFPPDYYASDHGGAPYPSFYGGEGPHGHRYYY*