Information report for Medtr8g030550
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Arabidopsis thaliana — AT2G46020
Gene Resources
- Pfam: PF00271 PF00176
- UniProt: G7LBQ1
- EMBL: CM001224 , PSQE01000008
- KEGG: mtr:11440396
- InterPro: IPR000330 , IPR001487 , IPR001650 , IPR014001 , IPR014978 , IPR027417 , IPR036427 , IPR038718 , IPR049730
- PANTHER: PTHR10799
- SUPFAM: SSF47370 , SSF52540
- PROSITE: PS51192 , PS51194 , PS51666
- Gene3D: 1.20.920.10 , 3.40.50.10810 , 3.40.50.300
- OrthoDB: G7LBQ1
- CDD: cd18793
- eggNOG: KOG0386
- STRING: 3880.G7LBQ1
Sequences
CDS Sequence
- >Medtr8g030550
ATGCAGTCTGGTGGTGGTGGACCTGGCCGGACGGCGGGGCGGGCGTCGACACCGTCGGCAGCTGCTTCGCCGTCTTCGTCTTCTTCGGCTTCACAGTTAGGGTTTGAATCTTTGCAGCAACAACACCAACAACAGCAGCAGCAACACCAACAGCAGCAGCAACAGCAGCAGATAGGTTCTAGGCAGTCATTTCAACAGCAACTGCTTAGAAAACCTGAAGGGAATGAAGCATTTTTAGCTTATCAAGCAGGGCGTCAAGGTGTATTTGGGAGTAACAATTTCCAACAACCTAATGCTATGCAGCTGCCTCAGCAGTCTGGAAAATTTGTTAATTTAGCTCAACATGGTTCAAACCAAGATGGCCAGCTCAGAGGTCAAGGTAGCGAGCAGCAGCAAATGATAAACCCTGTCCAACAAGCATACCTTCAATATGCTTTTCAGGCTGCGCAACAAAAGCAGCCTGCTTTGGGAATTCATTCGCAACAACAAGCTAAGATGGGAATGTTAAACCCTGCATCTGTAAAGGATCAGGAAATGCGAATGGGAAATCTGAAAATGCAAGAAGCTATGTCAATGCAGGCAGTCAATCAAGCTCAAGGATCATCCTCTAGGAATTCATCTGAACACAATGCTCGTGGAGAAAAGCAGATGGAGCAAGGGCAGCAGATAAGACCTATTCAAGCACCAGAAGCACAGCAGGGCAGCGTTCAAAATGTTATGAACACCCAGATTGCGGTAGCTCATCAATTGCAGATGATGCAAGCATGGGCACGTGAAAATAATATCGATTTATCACATCCTACGAATGCAAATTTAATGGCAAAGCTCATTCCAATGATGCAGTCGAGGATGGTCTTACCACCAAAGGCAGGTGAGAGCAACGTTGGTGCGCAGTCGTCACCTGTCCCTGTTTCAAAGCAGCAGGTTAATTCTCCAGCTGTTGCAAGTGAGAGCTCAGCACATGCTAATTCATCAAGCGATGTGTCTGGGCAGTCAGGTTCTTCGAAAGCTAGGCATACTGTTCCCCCCAGCCATCTTGGCCCAACAACAAATGCTGGTCACTCCAGTGACATGGCCATGCAGCAATTTAATATTCATGGTAGAGAGTCTCAAGCTCCTCTGAGGCAACAAGTAAAAGCTGGAAATGGAATGCCTTCTATGCATTCTCAGCAATCTTCTGCAGCCATGAACTTAGGTGCAGCAGACCATTCTTTGAATGTCAAAGGTTTATCTTCTAGTGCAGAACCTCCTCAAATGCAGTATATCAGGCAGTTAAACCAATCTACTGCTCAGGCCGGAGGTCCAACAAAAGAAGGGGGTTCGAGAAATAATGCTAAATCTCAAGTGCCACCTGCTCAGATGCCTGAGCGACAAAGTGCATTTACCAAACAACAGCTACATGTTCTTAAAGCACAGATACTAGCATTTAGGAGGATAAAGAAAGGAGAAGGAATGCTGCCTCCAGAACTTCTTCAAGCTATCACTCCACCGCCTCTTGAGGTGCAGGCAGAACAACCAAACCAGCCTGCGGGAGGACAAAATCAAGTCAGATCTGCTGGACATATTGCTGCAGAACAACCACGGCATGTTGAGGCCAATGCCAAAGAATCAAAATCTATTCCTGCCGTTAATGGCCACAGTTCTGTAAAGCAGGAATCCTTTTCAAGAGAGGAGAAATCGGCTCCACCACCAGTTCATATTCAAGCTGTTATGCCATCTATGTCTAAGGAATCTGCTTCGACATCATCTGCGGGAAAGGAAGAGCAGAAAACAATTGGATCCTCTTTTAAGCCAAAGCAGGACAGTGAACATGGAAATAACAGTACTCCTGTTAGAAATGAGTCGGCATTAGATAGGGGAAAGGCTATTGCACCTCAGGCCTCTGTATCTGACACGATGCAAATTACAAAACCTGCACAAGCAACCACTGTTTCTCAGCCGAAGGATGTGGGACCAGCCAGAAAATATCACGGACCCCTGTTTGATTTTCCTTTCTTCACTAGGAAACATGACTCTTTTGGGTCGTCAATGATGGTAAACAACAACAACAATTTATCACTGGCATATGATGTCAAAGATCTTCTTTCTGAGGAAGGCGCTGAAGTACTTAACAAAAAGCGGACAGAAAATTTAAAGAAGATTGAAGGTTTACTGGCTGTAAATTTGGAGAGGAAACGAATTAGGCCTGATCTTGTGTTGAGACTTCAAATTGAAGAGAAAAAGCTCCGCCTTTTAGATGTTCAGGCACGTTTGAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCTGATAGGCCATATCGTAAGTTCGTTAGGCTGTGTGAACGTCAGCGTATGGAACTTGTTAGACAAGTGCAGGCGTCTCAGAAAGCTGCAAGGGAGAAGCAACTCAAATCTATATTTCTATGGCGTAAGAAACTTCTTGAGGCACACTGGGCAATTCGTGATGCCCGTACTGCCCGCAACAGGGGGGTGGGTAAATATCATGAGAGGATGTTGAGGGAATTCTCAAAACATAAAGATGACGATAGAAGCAAAAGGTTAGAAGCCTTAAAAAACAATGATGTTGACAGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATTCCGGGTGATGCTGCAGAGAGATATACTGTTCTTTCATCTTTCTTAAGCCAGACTGAAGAGTATCTACATAAATTAGGAAGCAAGATAACAGCTGCCAAAAATCAACAGGAAGTAGAGGAGGCAGCAAAAGCAGCTGCGGATGCTGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCTGCTGCTGCTTGTGCCGGAGAGGAAGTGATGATTAGGAATCGTTTTCTGGAGATGAATGCTCCTAGAGACAGTTCATCCGTCAACAAGTATTACAACCTCGCACATGCAGTGAATGAAATGGTCATAAGACAACCATCCCTATTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGATTACAATGGATGCTTTCTTTGTACAACAACAAATTAAATGGAATTTTAGCAGATGAAATGGGTCTTGGCAAAACTGTACAGGTTATGGCATTGATTGCATACTTGATGGAATTCAAAGGAAACTATGGCCCACATCTCATAATAGTCCCAAATGCTGTCATGGTTAACTGGAAGAGTGAGTTATATAAGTGGTTGCCATCTGTGTCGTGCATCTTTTATGCTGGAGGGAAGGATTATCGAACAAAATTATTTCATCAAGTTTCTGCTCTGAAATTTAATGTCTTGGTGACTACTTATGAGTTCATCATGTATGACCGGGCAAAGCTTTCAAAAATTGATTGGAAGTATATCGTGATTGATGAAGCACAAAGAATGAAGGATAGAGATTCAGTTTTAGCTCGTGATCTTGATAGGTATCGTTGTCAAAGACGTCTGCTTTTGACAGGAACACCGTTGCAGAATGATTTGAAGGAACTCTGGTCACTTTTAAACTTACTTCTTCCTGAGGTTTTTGACAACAAGAAAGCCTTTCATGATTGGTTCTCAAAACCATTTCAAAAGGAAGGTGCTACTCAAAATGCAGAGGATGATTGGCTTGAGACAGAGAAGAAAGTCATCACAATCCATCGACTTCATCAGATTCTTGAACCTTTCATGCTCAGGCGACGAGTTGAAGATGTCGAAGGCTCACTACCACCAAAGGACTCAATAGTTTTACGATGTAAAATGTCATCTGTCCAGAGTGCTATTTATGACTGGGTCAAATCAACTGGTACCCTTCGTCTTGATCCCGAGGATGAGGAACGCAAGGTTCAGAGGAATCCTAACTACCAGCTGAAGCAATATAAAACTTTAAACAACCGATGCATGGAGCTAAGGAAAACTTGCAATCATCCGTTGCTTAATTACCCATTCTTCAGCGACTTATCTAAAGAATTCATTGTAAAATCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTCATAAAACTTCAAAGGACCGGACATCGTGTTCTACTATTCAGTACCATGACAAAACTTCTTGATATATTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTACAGAAGAATTGACGGGACAACTAGTTTAGAAGACCGTGAATCAGCTATAAACGACTTCAATGGCCCTGATTCAGACTGTTTTATCTTCCTGCTTAGCATTCGAGCTGCTGGAAGAGGCCTTAACCTTCAGTCTGCTGACACAGTTGTTATTTATGACCCTGATCCAAATCCTAAAAATGAGGAGCAGGCTGTTGCCAGAGCTCATCGCATTGGACAGAAAAGACCAGTCAAGGTTATCTACATGGAAGCAGTTGTCGACAAAATACCTAGTCATCAGAAGGAAGATGAAATGAGAGGTAGAGGCACTGTCGATCTGGAGGATGAACTTGCCGGCAAGGATCGCTACATAGGATCCATTGAGGGCCTCATAAGGAACAACATTCAGCAATATAAGATAGATATGGCTGATGAGGTGATTAATGCCGGACGTTTCGATCAAAGAACAACACACGAAGAAAGGCGTTTGACTTTGGAGACATTGTTACATGATGATGAGAGGTATCAAGAAACTGTCCATGATGTTCCATCATTGCAGGAGGTAAATCGTATGATTGCTAGGAGTGAAGAGGAAGTTGAACTCTTCGATCAAATGGATGATGAACTGGATTGGATTGAAGAGATGACGTGTTATGATCATGTGCCTAAATGGATTCGTGCCAATTCAAAAGAAGTTAATGCTGCTATAGGTGCTTTATCAAAAAGACCGTTGAAGAAAACTTTATTGGGTGGTAGTATTGCCGTGAATCCAAGTGAACTTGGTTCAGAAAGGAAAAGAGGCCGACCCAAAAAGCATACAAGTTATAAAGAGCTGGATGATGAAGATTTGGAATACTCTGAAGCAAGCTCTGAAGAAAGAAATGGATCTGCAAATGAAGAAGGGGAAGCAGGAGATTTCGAAGATGATGGGTATAGTGGAGCTGATGGAGCTCAGCCCATTGCTAAAGATCAACTGGAAAATAGTATGCTTTGTGACGGTGGATATGAATTTCCTCCATCTTTAGAAATGGTCAGAAATAATCAAGTGGTTCAAGACGCTGGTTCTTCTGGATCATCGGCCGACTGTCAAAAATTGACACAGATAGTATCACCATCAATTTCCGCTCAGAAATTTGGTTCCCTGTCAGCATTAGATGCCCGGCCAGGTTCCATTTCAAAAAGAATGACAGATGAGTTAGAGGAAGGAGAAATAGCAGTATCCTTTGATTCACACATGGAGCATCAACAGTCTGGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAGCAAGTTTTGCAGAAACCGAGGATTAAACGCAAACGTAGTATTCGTGTTCGACCCCGTCATGCCACTGAAAAACCTGAGGATAAGTCTGGTAGTGAAACGATTCCTCGTTTGTCAGTTCAAGCAGACCGTAAATATCAAGCACAGCTGAGGGCTGACCTAGAATCGAAATCACATGTAGAGTCCAATGCTAGCAGGAATGAGCAAAATTCTTCAATAAAAAATAAGCGTACCTTACCTTCAAGGAGGGTTGCTAATACATCCAAATTACATAGCTCACCAAAGCCTACTCGTTTGTCTGCTCCTTCAGAGGATGGTGGTGAACATTCTAGGGAAAGCTGGGAGGGGAAGCCTATCAATTCAAGTGGATCTTCTGCTCATGGCTCTAGGATGACAGAAATCATCCAGAGAAGGTGCAAAAATGTAATTAGCAAGCTCCAAAGGAGGATAGACAAGGAAGGCCATCAAATTGTACCTCTGTTAACAGATTTGTGGAAGAGGATTGAGAATTCTGGGTACAGTGGTGGATCTGGGAATAATCTGTTGGATTTACGAAAGATTGATCAACGAATTGATAAATTGGAGTATACTGGAGCAACAGATCTTGTATTTGACGTCCAGTTCATGTTAAAGAGCGCGATGCAATATTATGGTTTTTCCCTTGAGGTAAGAACTGAAGCAAGGAAGGTTCATAATCTCTTTTTTGATATATTGAAAATTGCATTTCCTGATACTGACTTCCAAGACGCAAAAAGTGCACTCTCTTTCACTGGTCCAATCTCTGCCCCCACCATGGTATCGTCTCCAAGGCAAGTGGCTGTTGGCCAAGGCAAGAGGCACAGGCTGGTAAATGAGGTGGAGCCGGATTCACACCCTTCACAGAGGCAGCTACAGCGCGGATCAGCTTCTAGCGGTGAAAACAGCAGGATTAGAGTCCGTGTCCCACCAAAGGAATCAAGATCCGGATATGGTAGCGGTAGCAGTATTCGAGAGCAACCTCAGCAGCAGGATGATTCTCCTCCACTACTCACTCATCCAGGCGAACTTGTTGTATGCAAGAAAAGAAGAAATGAGAGGGAGAAATCATTGGTGAAGTCTCGGACTGGTCCTGTTTCACCATCTATGAGAAGTCCTGGGGCAGGTTCAGTCCCTAAGGATGTTAGATTAACTCAACAGACTCAAGGGTGGACTGGCCAACCATCTTCTCAACAACCAAATGGTGGGTCAGTTGGGTGGGCCAATCCTGTAAAGAGGCTAAGAACAGATTCCGGTAAGAGGCGACCAAGTCATATGTAA
Protein Sequence
- >Medtr8g030550
MQSGGGGPGRTAGRASTPSAAASPSSSSSASQLGFESLQQQHQQQQQQHQQQQQQQQIGSRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFQQPNAMQLPQQSGKFVNLAQHGSNQDGQLRGQGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEMRMGNLKMQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQIRPIQAPEAQQGSVQNVMNTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPMMQSRMVLPPKAGESNVGAQSSPVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARHTVPPSHLGPTTNAGHSSDMAMQQFNIHGRESQAPLRQQVKAGNGMPSMHSQQSSAAMNLGAADHSLNVKGLSSSAEPPQMQYIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPERQSAFTKQQLHVLKAQILAFRRIKKGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVRSAGHIAAEQPRHVEANAKESKSIPAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKESASTSSAGKEEQKTIGSSFKPKQDSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITKPAQATTVSQPKDVGPARKYHGPLFDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSEEGAEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDVQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELVRQVQASQKAAREKQLKSIFLWRKKLLEAHWAIRDARTARNRGVGKYHERMLREFSKHKDDDRSKRLEALKNNDVDRYREMLLEQQTSIPGDAAERYTVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAAKAAADAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYKWLPSVSCIFYAGGKDYRTKLFHQVSALKFNVLVTTYEFIMYDRAKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGATQNAEDDWLETEKKVITIHRLHQILEPFMLRRRVEDVEGSLPPKDSIVLRCKMSSVQSAIYDWVKSTGTLRLDPEDEERKVQRNPNYQLKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAINDFNGPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYMEAVVDKIPSHQKEDEMRGRGTVDLEDELAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDDERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDDELDWIEEMTCYDHVPKWIRANSKEVNAAIGALSKRPLKKTLLGGSIAVNPSELGSERKRGRPKKHTSYKELDDEDLEYSEASSEERNGSANEEGEAGDFEDDGYSGADGAQPIAKDQLENSMLCDGGYEFPPSLEMVRNNQVVQDAGSSGSSADCQKLTQIVSPSISAQKFGSLSALDARPGSISKRMTDELEEGEIAVSFDSHMEHQQSGSWIHDRDEGEDEQVLQKPRIKRKRSIRVRPRHATEKPEDKSGSETIPRLSVQADRKYQAQLRADLESKSHVESNASRNEQNSSIKNKRTLPSRRVANTSKLHSSPKPTRLSAPSEDGGEHSRESWEGKPINSSGSSAHGSRMTEIIQRRCKNVISKLQRRIDKEGHQIVPLLTDLWKRIENSGYSGGSGNNLLDLRKIDQRIDKLEYTGATDLVFDVQFMLKSAMQYYGFSLEVRTEARKVHNLFFDILKIAFPDTDFQDAKSALSFTGPISAPTMVSSPRQVAVGQGKRHRLVNEVEPDSHPSQRQLQRGSASSGENSRIRVRVPPKESRSGYGSGSSIREQPQQQDDSPPLLTHPGELVVCKKRRNEREKSLVKSRTGPVSPSMRSPGAGSVPKDVRLTQQTQGWTGQPSSQQPNGGSVGWANPVKRLRTDSGKRRPSHM*