Information report for Medtr8g007390
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Citrullus lanatus: Cla97C05G083680
- Cucumis melo: MELO3C006286
- Cucumis sativus: CsGy3G010620
- Glycine max: Glyma.03G107700, Glyma.07G119000, Glyma.09G245000
- Gossypium hirsutum: Gohir.A11G074700
- Juglans regia: Jr05_02460, Jr05_02450, Jr14_02920
- Prunus avium: Pav_sc0002465.1_g050.1.mk
- Prunus persica: PRUPE_2G120600
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: A0A072TM71
- EMBL: CM001224 , PSQE01000008
- AlphaFoldDB: A0A072TM71
- KEGG: mtr:25500115
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: A0A072TM71
- CDD: cd00590
- eggNOG: ENOG502QRDT
- STRING: 3880.A0A072TM71
Sequences
CDS Sequence
- >Medtr8g007390
ATGCCTCCAAAGACGCCAAAGAGAGGTTCAGCGGGTAGTGGTTCAAAGAGGGGTGGCAGATTATCGAGAGGAACTGCGAAATCTGCGCAGAATCAACAACAGCAGCAATCTGAACTTGTTGAAGAGAAGACGGTGATTGAGGAAGAGATCAAGGTTGAAGAGAATCTTGTTGTCGAGGAAAAGCCTGTGGTGGAAGAAGATAATCCTGTTGTTGAAGATAAAGCTATTGATATGAATCAAATTGCTCCTGAGGCTGTAGAAGATGCTAATTCTGCGAAAAAAGATGAAGAGGAGGTTAAGGAGTCTATAGATGAATATGAGAGAGACGAGCGTCTAGATTTGGAGGATAATGATCCTGAGTATGAACCTGAGGAGTATGGTGGGGTTGACTATGATGAGAAGGAAATTGAACAGGAAGAGGGACATGAGGTGGGAGATGAAGTTGAGGAAGAACCTGAAGAAAATGTTGTTGAAGAAGGTGATTCAGGTGAGGAAGAAGTCGAAGATGGTCATGATGAAATTGAGGGAGAAGAGGATGACGAGCATGCTGATGAGGAGCATGACCGTGAGCGTGCGGAGATGGCTGATGTGGATGAAGAGGAACATCGTGAAGTTGTGAAGGAGAGGCGAAAGCGGAAAGAATTTGAAGTATTTGTTGGGGGCCTAGACAAGGATGCTACTGAAGATGATCTGAGGAAGGTTTTCAGTGAAGTTGGGGTTGTGACTGAGGTCAGGCTGATGATGAATCCTCAGACAAAAAAGAACAAGGGATTTGCATTCTTGCGGTTTGAAAATGTGGAACAAGCAAAACGAGCTGTAGCAGAGCTTAAAAACCCAGTGATTAATGGAAAACAATGTGGTGTTACTCCGAGTCAGGACAGTGATACCCTCTATTTGGGAAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGCTGAAGCATTATGGAGTTACAAATGTTGAGGATATAACTTTGGTAGAAGATTCTAATGATAAAGGAACAAACCGTGGATTTGCATTCTTGGAATTTTCCTCCCGCTCAGATGCAATGGATGCCTTTAAGAGACTGCAGAAGAGGGATGTTACGTTTGGAGTTGATAAGCCTGCAAAGGTTTCATTTGCAGATTCTTTTATTGACCCGGGTGATGAAATTATGTCACAGGTTAAAACTGTATTTATTGATGCACTTCCTCCTTCATGGGATGAAGATTATGTCCGGAATCTTCTCAAGAAATATGGTGAGGTTGAAAAGATTGAGCTTGCAAGGAACATGCCAGCTGCTCGTAGAAAGGACTATGGATTTGTTACCTTTGGCTCACACGATGCTGCTATAAGATGTGCTGACAGCATTACTGGTACAGAATTGGGTGAAGGCGACAAAAAGGCCAAAGTGAGGGCTAGGTTATCAAGGCCACTTCAGAGAGGCCGTGGAAAACATGTTGGTCGTGGGGACTATCGCCCGAGTCGCGGATCTGCAATAATGTCAAGGCCTTCTTGGAGCAGCCGACCTGCTCCTCGTAGTTTCTCGTCGCGTGGGGTAAGAGGAATTGGAAGTCGTGCTCCGCCAATCAGGTCTATTAGTGCTAGAGATAGACGCCCTGTCATGTCTATACCAGTTAGAAGTAGGCCACTACCTCCTCCAGCTAGATCTTATGATAGAAGACCAGCTGATGCTGCATATTCAAAAAGCAGCGTGAAGAGAGATTATGGTCGGCGTGATGATCTACCACCTCCAAGAAGTAGAGTTGCTGTAGATTATGGATCAAGGATGACCTCTGAAAGACGCCCAACTTATAGGGATTATCCACCTCGTGGATCTGACTACTCTGATCCCCCTAGAAGTACAGCTCGTGCTGCACCTAGGAGAGGTTATGTGGATGATGGTTACAGCCAAAGGTATGAGAGGCCACCTCCTCCTCCACCCCCTTCCCATCCAAGTTATCGCGAGGGACGCCCTCGTGATTATGATTCTCTATCTGGCTCAAAACGTTCTTACGCTGCCGTGGATGATGTTCCCCCAAGATACGCCGATACTGGTGCTCGCCAATCAAGAGCTCGATTGGAGTATGACTATGGTGGCAGTGCTTCACAGTATGGTGATGCTTATGGTGATAGAGTTGGAAGATCTAGTCTTGGATATGGTAGTGGCAGCCGAAGTTCTATTTCTGGTCAAGATTCACATGGGGTGTATAGCAGTCGGCAGGGCATGAGTTATGGTGGAGGCTCTTATGGCGGTAGTGATGTTGGAGGCATGTACTCATCAAGTTATGGCGGTGATTACGTTTCTCGTGGAAATGATGTTGGCGGCAGCTCATATTCATCTATGTATTCTGGCAGGGGTGCGGGTGGCGGTAGCAGTTACATGGGAAGCGGTGGTTCAGGATCTTATTATTGA
Protein Sequence
- >Medtr8g007390
MPPKTPKRGSAGSGSKRGGRLSRGTAKSAQNQQQQQSELVEEKTVIEEEIKVEENLVVEEKPVVEEDNPVVEDKAIDMNQIAPEAVEDANSAKKDEEEVKESIDEYERDERLDLEDNDPEYEPEEYGGVDYDEKEIEQEEGHEVGDEVEEEPEENVVEEGDSGEEEVEDGHDEIEGEEDDEHADEEHDRERAEMADVDEEEHREVVKERRKRKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSFSSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRPLPPPARSYDRRPADAAYSKSSVKRDYGRRDDLPPPRSRVAVDYGSRMTSERRPTYRDYPPRGSDYSDPPRSTARAAPRRGYVDDGYSQRYERPPPPPPPSHPSYREGRPRDYDSLSGSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSHGVYSSRQGMSYGGGSYGGSDVGGMYSSSYGGDYVSRGNDVGGSSYSSMYSGRGAGGGSSYMGSGGSGSYY*