Information report for Medtr7g081210
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Citrullus lanatus: Cla97C05G083680
- Cucumis melo: MELO3C006286
- Cucumis sativus: CsGy3G010620
- Glycine max: Glyma.09G245000, Glyma.18G248200, Glyma.03G107700, Glyma.07G119000
- Juglans regia: Jr05_02450, Jr05_02460
- Nicotiana attenuata: A4A49_34832
- Prunus persica: PRUPE_2G120600
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: G7KTC8
- EMBL: CM001223
- AlphaFoldDB: G7KTC8
- KEGG: mtr:11433736
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: G7KTC8
- CDD: cd00590
- eggNOG: KOG0118
- STRING: 3880.G7KTC8
- HOGENOM: CLU_356937_0_0_1
Sequences
CDS Sequence
- >Medtr7g081210
ATGCCTCCGAAAGTGGTGAAAAGAGGTTCTGCGGCAAAGAAGGCGAAGGTTTCTTCAAAAACCTCAATTCAGAATCCGCCGCAAGAACCTGAACCCAAACCTATCAAGAATCATGAAGACAATCATGTTGATGATTCTGCGGTGGAGGAGAATTCTGTTGAAACAGTGCCTAATGGTGTAGCTATGGTGGAAAACAATGGAGAGGAGGTTAAGGAGTCCATAGATGAATATGAAAAAGATGAACACTTAGATTTTGAGGATAATTATCATGAGTATGATCCTGAGGAGTATGTTGGTGATGATGACTATGATGAGAGAGGAATTGAACAAGACGAGGGTCAGGAGGCCGGAGATGAAGTGGAGGAAGAACCTGAAGAGAATGTGGATGAAGAAGAGGGTGATACAGGTGATGAGGAAGTTGAAGAAGTTGAATATGTTTATGAAGAAGTCGAGGGTGATGATGATGATGTTGCTGGTGATGATGAGCATGCCAGTGAGGAGAACGTGCATGAGCATCTGGCTGATGTAAAGGAAGAGGAACAAGTTGAAGTTATAAAGGAGACGCAGAAGCAGAAGGAATTGGAAGTATTTGTTGGGGGCCTAGACAAGGAGGCTACAGAGCATGATTTGAGGAAGGTTTTCAGTAAAGTTGGGGAGATTACTGAAGTTAGGATGACTGTGAATCCTCAGACTAAAAGAAACAAGGGATTTGCTTTATTGCGTTTTGAAACTGTTGAACATGTTAAAAGAGCATTGGCAGAGCTAAAAAATCCTGTGATTAATGGCAAACAATGTGGTATCACTATCACCACATGTCAGGACAGTGATACTCTTTATTTAGATAACATATGCAAGTCATGGAAAAAGGAAGCTTTAAAGGAGAAATTGAAACATTATGGAGTTGAAAGTTTCAAGGATTTGACTTTATTAGAAGATGATAACAATGAGGGAACAAACTGTGGATGTGCTTTTTTGGAATTTTCATCTCATTCAGATTCTAAGGACGCCTATAAGCGATTGCAGAAGACAGATGTTGTTTTTGGAGTTGATAAACCTGCCGAGGTTTCCTTTGCAAACTCCTTTATTGACCTGGGTGATGATATTATGGCACAGGTTAAAACAGTATTTATTGATTTACTGCCTCCTTCATGGGATGAAGATTATGTCCGAGCTCTTCTTAAGAAATATGGGGCGGTTGAAAAAGTTGAGCTTGCTAAGAACATGCCAGGTGCTCGCAGGAAGAATTATGGATTTGTTACGTTTGGTACACATGCTGCTGCTGTAGAATGTGCTGAGAGCATTACCAGTGCAGGGTTAGGCGAAGGCAACAAAAAGGCAAAAGTTAGGGCTAGATTGTCGAGACCTCTTCCGAAAGTTCGTGGTAAACATGTTCCTCATAGGGACATTTCTGGCCGCAAGATTGGAAGATTGGAAAGGCCTTCACGTAGTAGACCTGCACCACGTAGTAGACCTGCACCACAGAGTCGACCTGCTCATGTGTTCAGAAGACTTGGGAGTCGCATTCCACCAGCTAGACCTTCTAGTGCGAGAAATAGACGTCCTGTAACGTCGATACCAGTAAGAGCTAGGCCAGCCTCTCCTCCAGCTAGATCCTACAGGAGATTAGCAGCTGCATATCCAAAAAGTAGCATGAAGAGAGATTATGGTCGACCTGTGGATCTGCCACCTCCAAGAAGTAGAGTTTCTGCAGATTATGGTTCTCAGGTGGTCTCTCAAAGAGGTCCATCTTATAGAGATTATCCAGCCCGTGACTCTGGCTACCCTGACCTGCATAGGGATACATCTCGTACTGCACCAAGGAGGGGTTATCTGGATGATGGTTATGATCGGAGACTTGAAAGGCCTCCTTCTCCATCTCCCCGTCTAAGTTATCGCGAAGGACGCCCCCGCGATTATGACGCACTATCTGGCTCGAAACGTCCTTATGCTGCCATAGATGACATTTCTCCACGGTATGCTGATGCTGGTGCTCGCCAATCAAGATCTCGTTTAGACTATGACTATGGAGGCAGTGCTTCCCGATATAGAGAGGCTTATGGTGATAGTAGGCTCGAAAGATCTAGTTTAGGATATAGTGGCAGTAGAAGTTCTCTATCTAATCAAAACTCACATGGGGCATATAGCAGTCGACAGGACCCAAGTTATGGCAGAGGCTCTCTTGGTGGTAGTGATGGAGGTATCTACTCATCAAGCTATGGTGGTGATTACTTATCTCGTGGAAGTGATGTTGGTGGCAGCTCATATTCATCCATGTATTCTAGTAGGGGTATGAACGGTAGTAGCAGTTATATGAGTGGTAGCGGTGGTGGATCTAGATCTTATTATTGA
Protein Sequence
- >Medtr7g081210
MPPKVVKRGSAAKKAKVSSKTSIQNPPQEPEPKPIKNHEDNHVDDSAVEENSVETVPNGVAMVENNGEEVKESIDEYEKDEHLDFEDNYHEYDPEEYVGDDDYDERGIEQDEGQEAGDEVEEEPEENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVIKETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPAEVSFANSFIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAESITSAGLGEGNKKAKVRARLSRPLPKVRGKHVPHRDISGRKIGRLERPSRSRPAPRSRPAPQSRPAHVFRRLGSRIPPARPSSARNRRPVTSIPVRARPASPPARSYRRLAAAYPKSSMKRDYGRPVDLPPPRSRVSADYGSQVVSQRGPSYRDYPARDSGYPDLHRDTSRTAPRRGYLDDGYDRRLERPPSPSPRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAYGDSRLERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGRGSLGGSDGGIYSSSYGGDYLSRGSDVGGSSYSSMYSSRGMNGSSSYMSGSGGGSRSYY*