Information report for Medtr5g097890
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Actinidia chinensis: CEY00_Acc29548
- Citrullus lanatus: Cla97C02G048640
- Glycine max: Glyma.14G005800
- Gossypium hirsutum: Gohir.D10G082300, Gohir.A10G069101
- Juglans regia: Jr07_32080
- Manihot esculenta: MANES_04G104700
- Populus trichocarpa: POPTR_003G180100v3
- Prunus avium: Pav_sc0000663.1_g240.1.mk
- Prunus persica: PRUPE_2G099100
- Rosa chinensis: RchiOBHm_Chr1g0336931
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: G7K4Y8
- EMBL: CM001221 , PSQE01000005
- AlphaFoldDB: G7K4Y8
- KEGG: mtr:11433942
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- OrthoDB: G7K4Y8
- eggNOG: KOG0845
- STRING: 3880.G7K4Y8
- HOGENOM: CLU_012427_0_0_1
Sequences
CDS Sequence
- >Medtr5g097890
ATGGAATCTGATGTCGGAGGTGTCTGTGATTCTTCTACTGTGCTAAGTTACAAGAAAAGAAGGGTTTCTGAGTGCTATGTTACTCGTTCGAACAAGACCATGACCAAAATTGAAGCTTCATTGCCAATACTGCACTCTCCTGGTTACTACACTGAACCGTCTTTGAAGGATTTAGCGGCCCGTGAAGTCCTTTACCCCGGCTATTGCAGCAGTGTTCCAGATTTCACTGTTGGAAGATTTGGTTATGGATATATTAGGTATGTCAATGAAACGGATGTACGAGGATTATGTTTAGATGACATTGTGAAGTTCCATAAGAATGAGGTTATAGTTTATGAGGATGAAAATAATAAGCCTGTTGTTGGTCAGGGTCTTAACAAAGCAGCTGAAGTGGTTATGGTACTGAATAGTAGAAAGTTGAAGTCTAAGGAGTGTCGGAATGATGTTCTGGTGAAAAAATTAAAACAAAGTACAGAGAGTCAAGGAGCACGGTTTGTGTCATTCGATCTGGTAACTTGTGAGTTGAAAATCTTAGTTGAACACTTCAGTAGATTTGGGTTTGATGACGATGATGAAGAGGACGCTGTTATGGATGATGCTGAGACACATGATGTTGAGAAAGAGTTGCCGATAAATGTCGATGAAATTGAGCTTTCTCATTCTCTTCCTGCCCATCTTAGGCTTGATCCTGTTAAAATGAGAGAAATGAGATCATTGATGTTTCCCGATGAAGAAGAGATGGAGGACTTGGGTCGCAAATCATCTTTTGGTAAGGAAAGTGTGAGGCCTTTGAAAAATTCTGCTCAGTCGGCAATGAATAGATCTACTCCACCAACTGTTCGAAACACTCCATTTCCATTACTTGAATATAAGCACGGAAATCTAGAGTCAAATTCTCCTGGATCCATTTTGATGGTTCAGCAACATAAGAATATGCCTCTGAGGGCAGTAAAAGCTCAGGGTTTTAAGCTGGACCTTAAGCAGGAAACTCCAATATCCGGAAGCTATGCTCACAATATAGTTGATGCTGGTCTGTTCATGGGTAAGTCATTTCGAGTTGGGTGGGGACCAAATGGCATTCTTGTACACTCTGGTACACTTGTAGGAAGTGGTGGTGATCACAAGCTAATGTCATCGGTTGTCAATTTGGAGAAAGTTGCTTTTGACAATTTGGTAAGAGATGAAAATAAAAAAGTGTGTGAAGAACTTGTTGACCATGCTTTGGTTTCTCCATTAAATTTTCACAAAGGAATAAACCATGTGACGAAAGAGGTTGATGTTGGTCCCTACAAGTTAACTCTTCAAAAGCTCGAAGCTAATCGTACAGACCTGCCAGAGATTTCTCATCAATACTGTGATATTATTGAGAGACAAATGAGTGTGCCTGGCTTACCTTCCTGGAACCGATTAGGTTTGACACACCAAGTAATGACCTGGGAGTTAATTAGAGTTCTTTTTTCTGAGAGAAAACAAAAGGGTCAAATAGAATCATTAGGCGCTGACAATGAGGAAGATATGATGGAGGATATAAAGGAAGTTGATAATGATGTTGACCAAGAAGCACTACCTCTTATCAGAAGAGCAGAGTTCAGTTATTGGATGCGAGAGAGTGTCTCCTATCATGTCCAAAACCAAATAAGCTCTCTAAATGACTCTCACTATTTGCAACATGTTTTCACACTCCTGACTGGACGGCAATTGGACGAAGCAGTGCAGTTGGCTGTGTCCAATGGAGATGTGAGGCTGGCTTGTTTGTTAAGTCAGGCTGGTGGTTCTACTCTGAATCGCTCTGATATTGCAAAGCAACTTGATATTTGGAGGAATAAAGGCCTTGATTTCAATTTCATTGAAGAAGACAGATTGAGACTCTATGAACTGCTTGCGGGAAATATTCATGATGCATTGCATGATATCCAAATTGACTGGAGGAGGTTCTTAGGTTTGTTAATGTGGTACCAATTACCTCCTGACACTTCGTTACCAGCTGCTTTTGAGACTTATAAACATTTTCTTGATGAGGGAACAGCTCCATATCCTGTTCCACTTTATATTGATGAAGGAACATCTGAGGAGGTTGTCAGTTTGAAAGCAGATAAACACTTTGACATTTCATTTTATCTCATGCTTCTTCATGCTAAGGAAGATACAGAATTCAGTTTTCTGAAGGCTATGTTTAGTGCCTTCTCGTCAACCCCTGATCCACTTGACTATCATATGATCTGGCACCAACGTGAAGTTTTGGAAGCAGTGGGTGTTATCAATTCTAATGATCTTCATATTCTAGACATGGGATTTGTGTCTCAGCTGTTGTGCTTAGGGAAATGTCACTGGGCCATATATGTGGCCCTTCACTTGCCTCATCGGGAAGATTATCCATTTCTTCATGTAAATCTGATTCGTGAAATATTGTTCCAATACTGTGAAACTTGGAGTTCAGATGAATCTCAGTATCATTTCATTGTGGATTTAGGCATTCCCAAAGAATGGATGCACGAGGCTTTGGCAATATATTACAATTATAATGGGGATCTTGCAGAAGCCCTTGAGCAATATCTTCAGTGTGCAAATTGGCAGAAAGCTCATACCATCTTTGTAACTTCAGTTGCTCATAAGTTATTCTTGCAAGCCAAACATTCTGAGATATGGAGGATTGCAACTTCCATGGAGGACTATAAATCTGAAATTGAAAACTGGGAGTTGGGAGCTGGAATTTATATTTCATTTTATTCAATGAGAAACTCACTTCAGGGAGATGCCAATACCATGACTGAATTGGATTCTCTTCAAAGTAAAAATGCTGCATGTCAGGATTTTGTCAGTCAGTTAAATGAATCTTTGGCTGTTTGGGGTTACAGATTACCTATTGATGCAAGAGTGGTGTATTCTAAAATGGCAAGCCAGATATGTGACTTGCTGTTATCTGCTGTCGGTGAGGGTGCCTCACGTGATGAGCAGTTTGGTTGCTTTAACACTGCTTTCAGTGCTCCCATTCCTGAAGACCTACGATCCGGTCACTTGCAGGATGCAGTGTATCTGTTTACCAGCTATTTGTCAGAGATTGCGACTTAA
Protein Sequence
- >Medtr5g097890
MESDVGGVCDSSTVLSYKKRRVSECYVTRSNKTMTKIEASLPILHSPGYYTEPSLKDLAAREVLYPGYCSSVPDFTVGRFGYGYIRYVNETDVRGLCLDDIVKFHKNEVIVYEDENNKPVVGQGLNKAAEVVMVLNSRKLKSKECRNDVLVKKLKQSTESQGARFVSFDLVTCELKILVEHFSRFGFDDDDEEDAVMDDAETHDVEKELPINVDEIELSHSLPAHLRLDPVKMREMRSLMFPDEEEMEDLGRKSSFGKESVRPLKNSAQSAMNRSTPPTVRNTPFPLLEYKHGNLESNSPGSILMVQQHKNMPLRAVKAQGFKLDLKQETPISGSYAHNIVDAGLFMGKSFRVGWGPNGILVHSGTLVGSGGDHKLMSSVVNLEKVAFDNLVRDENKKVCEELVDHALVSPLNFHKGINHVTKEVDVGPYKLTLQKLEANRTDLPEISHQYCDIIERQMSVPGLPSWNRLGLTHQVMTWELIRVLFSERKQKGQIESLGADNEEDMMEDIKEVDNDVDQEALPLIRRAEFSYWMRESVSYHVQNQISSLNDSHYLQHVFTLLTGRQLDEAVQLAVSNGDVRLACLLSQAGGSTLNRSDIAKQLDIWRNKGLDFNFIEEDRLRLYELLAGNIHDALHDIQIDWRRFLGLLMWYQLPPDTSLPAAFETYKHFLDEGTAPYPVPLYIDEGTSEEVVSLKADKHFDISFYLMLLHAKEDTEFSFLKAMFSAFSSTPDPLDYHMIWHQREVLEAVGVINSNDLHILDMGFVSQLLCLGKCHWAIYVALHLPHREDYPFLHVNLIREILFQYCETWSSDESQYHFIVDLGIPKEWMHEALAIYYNYNGDLAEALEQYLQCANWQKAHTIFVTSVAHKLFLQAKHSEIWRIATSMEDYKSEIENWELGAGIYISFYSMRNSLQGDANTMTELDSLQSKNAACQDFVSQLNESLAVWGYRLPIDARVVYSKMASQICDLLLSAVGEGASRDEQFGCFNTAFSAPIPEDLRSGHLQDAVYLFTSYLSEIAT*