Information report for Medtr3g108660
Gene Details
|
|
Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Glycine max: Glyma.06G075500, Glyma.04G074300, Glyma.14G132500, Glyma.17G201000
- Gossypium hirsutum: Gohir.A13G181900, Gohir.D13G185401
- Juglans regia: Jr11_28260
- Prunus avium: Pav_sc0003562.1_g090.1.mk
- Prunus persica: PRUPE_1G462800
- Rosa chinensis: RchiOBHm_Chr6g0312261
- Vitis vinifera: VIT_04s0008g03170
Gene Resources
- Pfam: PF00443
- UniProt: G7JCB7
- EMBL: CM001219 , PSQE01000003
- AlphaFoldDB: G7JCB7
- KEGG: mtr:11435462
- OMA: GSCEEMP
- InterPro: IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00973 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- OrthoDB: G7JCB7
- CDD: cd01795 , cd02668
- eggNOG: KOG1863
- STRING: 3880.G7JCB7
- HOGENOM: CLU_010287_0_0_1
Sequences
CDS Sequence
- >Medtr3g108660
ATGAGTAGACCGACGACTCGGAGTAAAAATAAAAGACAAAAACAGGGTGATGATGGTGTCTGTACTAATGAAACATGGAGGAAAATTCACGAAACCGGTGTGGTTACTGAAGATGATGTTAATCAGTTGTATATGATTTGGAAACCGGTTTGTTCAGGCTGCCGTGTCAATACCAAAGATAACCCTAATTGCTTTTGTGGATTGGTTCCACCTCCAAATGGATCCAGGAAGTCAGGCTTATGGGAGAAGATGTCAGATTTTGTTGAAAGTCTTGGCCCTGATCCAAACAATGATCTTCGTGATTCTGCTGATTCTCCTGCAGGTCTAACAAATCTTGGGGCAACGTGTTATGCCAATGGAATACTTCAATGCTTGTACATGAACAAATTATTCCGAGAAGGCATATTTTCTGCAGAACCAGATGTTTTAAGGCAACAACCGGTGTTAGATCAACTAGCTCGACTTTTTGCGCAGTTACAAGCTAGTAAAATGGCTTATATAGATTCTTCTCCCTTTGTGAAAACACTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCACGAATTCTTGACATTGCTTCTGTCATTGCTTGAGCGTTGTCTGAGTCATTCCAAAGTTCCCAAGGCAAGAACAGTAGTTCAAGATCTTTTCCGCGGAAGTGTATCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGATTTTTATGAGTTAGAGTTGAATGTGAAGGGATTGAAAAGTTTAGATGAGAGTCTAGATGATTACCTAGCTGTTGAAGAGCTTCATGGAGACAATCAATATTTTTGTGATTCATGCAACACAAGAGTTGATGCCACTCGCAGCATCAAGCTGTGTACATTACCTGATGTACTTAATTTTCAACTTAAACGTTGTGTCTTTCTTCCAAAGACTACTACAAAGAAGAAAATTACTTCTGCATTTTCATTTCCTGCACAACTTGATATGCAGCACAGACTGCCTGAGTTGTCTCAGTTTGATTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGAACCGGTGTTAATAGTGGCCATTACATTGCCCACATCAAGGACAAAAACACGGGGCAGTGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTAACCATCCATTTGGCGAAGGATCTTCTAGTTCTACTACTAAGTCCATTGCAATTGATGCAATTCACTCTGACTGCTCTGAAGCAAGGATAGCTGAAAGTAATGGAAACGGCTTCCACACCACCCATTCACAATCTTCGCTTATAGAGACATTTTCTTCTTGTGATGCATACATGTTGATGTACCATCTTAGACATACTAAAGGTATAAAGGAAAATGGGGGCATAGTTTGCGGTGCTAGCCATAAAGAAATAGAGGGTGTTGTAGCTACTGCACAAGATGATGCTTCTCTTCCTTCTCATCTTTATGATGAGATTTGCAATGTCAACGCCTCATATCTTGATGCTTGTCAACAATACAGTCATAGGAAAGAGTTAGAATTGAGTCGTATTACTGATAGGAGACATGAAGTTCGATCTATTTTAGCTGAAGCTCCTGTTCCACCATTGGAGCGACCGTTTTATTGGATTTCTAGTGACTGGCTTCGCCAGTGGGCTGACAACATTATTCCAACTTCTATCGACAACACATCCATCCAATGTTCACATGGGAAAGTCCCAGTTTCAAAGGTTCCCTCAATAAAGCGACTGTCTGTCAAAGCCTGGGATAAGTTGTTCTCCAAGTATGGTGGGATTCCAACACTATCTCATGATGACCATTGTCGGGATTGTCTGATATGCGGGGCTCAGACAGTGGTATCAGCCGACACCTATCGCGGTAGAAGAGAATCATTGAAGTCACTTGCACGGGATATTCTTGATGGGAACTGTCTAGATGGAAAGTATTTCATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTTCTTGATGCTCCATCTGAAGCTGATGCTGGACTAACAGCAGCAATTAATTGTCCGCACGGTCTATTGATGCCAGAGCAAGCTCCTGGTGCAAAGCGGGTGCTTATTCCTGAGACTTTTTGGCTCTTCTTATACGAAGATGCTATTTCTGTAAAACCTGATGATCCTGTAGGTGGCCCAGCTCTTCCTTCAGATTCCCTAGAGTGTTCTCAATGCACTGTTGAATTATCTCAAGCAGCATGCTTGGAGGACTCCTTGAGAGTAGTTAAACAAAAGCAGCGTCAGAATCATGAGAAATTATTCCAGGCTAAAAGCATGCCACTCTCTGTGAATTGCAAATATTTCTTGGTGGCTTCTTCATGGATTTCTAAATGGAGAAATTACATTAGTCCACCATTCAAGAATCTAGATAAACCTGAAACTTTAGATGGGGTAATTGATTCGCTGATTTGTGAAAAGCACTCACGACTTATTGAAAGACCTCCTGAACTGGTTTTCAGACGCGGTGCTATAATCCAGAGAGAATCTTCGGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGATATGCTTCTGTGAAGAATGGGGTGGTTCTGAGACCAAAGGAATATCAGCAACAATTGATTATATTAATGATTCAGATAACTTATTGACTGGATCCTGCGACGAGATGCTGATATGTGAGGATCAGTCACACACGGAGGATAAAATGAATAATGAAAATGGAACTGGACAAATTTTGATCAAGACCTGTCCTGAGGTCTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAATTAATGCATAAACTTAACTATTGCAATGAGGACATATGTGTAATTCTTGTACGTGGTAAGGAGGTACCTAAATCAATATTGGAGGCCTCAAAGGGATTAGTTGAAACAGATCGGCGGATTTCCAAGCGCTCCCGGAAGACTAAAAATGGAAGTTCGGTTAGTCTGAAAGTTTCTGCTTCCACATCACTATACCAGCTGAAGATGATGATATGGGAGTCCTTTGGGGTTGTCAAGGAAAACCAGATCCTACATAAAGGTGATAGGATAATTGATATGGATGATGAATGTGCTACCCTTGCGGATGCAAATATATTTGCCAGAGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATCGAGATATTGCAGATGAGCTCTGCTGTGATAAGATGGATGTGCAGCATACGGAGGAAGGTTTTCGTGGAACACTTCTTACAGCAAACATTTCATCCCAGGTTGTCTAA
Protein Sequence
- >Medtr3g108660
MSRPTTRSKNKRQKQGDDGVCTNETWRKIHETGVVTEDDVNQLYMIWKPVCSGCRVNTKDNPNCFCGLVPPPNGSRKSGLWEKMSDFVESLGPDPNNDLRDSADSPAGLTNLGATCYANGILQCLYMNKLFREGIFSAEPDVLRQQPVLDQLARLFAQLQASKMAYIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTVVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLAVEELHGDNQYFCDSCNTRVDATRSIKLCTLPDVLNFQLKRCVFLPKTTTKKKITSAFSFPAQLDMQHRLPELSQFDLVYDLSAVLIHKGTGVNSGHYIAHIKDKNTGQWWEFDDEHVTNLGNHPFGEGSSSSTTKSIAIDAIHSDCSEARIAESNGNGFHTTHSQSSLIETFSSCDAYMLMYHLRHTKGIKENGGIVCGASHKEIEGVVATAQDDASLPSHLYDEICNVNASYLDACQQYSHRKELELSRITDRRHEVRSILAEAPVPPLERPFYWISSDWLRQWADNIIPTSIDNTSIQCSHGKVPVSKVPSIKRLSVKAWDKLFSKYGGIPTLSHDDHCRDCLICGAQTVVSADTYRGRRESLKSLARDILDGNCLDGKYFISRPWLQQWWKRKVLDAPSEADAGLTAAINCPHGLLMPEQAPGAKRVLIPETFWLFLYEDAISVKPDDPVGGPALPSDSLECSQCTVELSQAACLEDSLRVVKQKQRQNHEKLFQAKSMPLSVNCKYFLVASSWISKWRNYISPPFKNLDKPETLDGVIDSLICEKHSRLIERPPELVFRRGAIIQRESSAGGLTIISENDWICFCEEWGGSETKGISATIDYINDSDNLLTGSCDEMLICEDQSHTEDKMNNENGTGQILIKTCPEVCESCIGEKESCELMHKLNYCNEDICVILVRGKEVPKSILEASKGLVETDRRISKRSRKTKNGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDMDDECATLADANIFARDQIIVRDSEIHENRDIADELCCDKMDVQHTEEGFRGTLLTANISSQVV*