Information report for Medtr3g088480
Gene Details
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Functional Annotation
- a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).
Homologous
- Arabidopsis thaliana — AT1G21700
Gene Resources
- Pfam: PF00249 PF04433 PF16495
- UniProt: G7J4Z5
- EMBL: CM001219 , PSQE01000003
- AlphaFoldDB: G7J4Z5
- KEGG: mtr:11422202
- InterPro: IPR000433 , IPR001005 , IPR007526 , IPR009057 , IPR017884 , IPR032451 , IPR036388
- PANTHER: PTHR12802 , PTHR12802:SF61
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS50135 , PS50934 , PS51293
- Gene3D: 1.10.10.10 , 1.10.10.60
- OrthoDB: G7J4Z5
- CDD: cd00167
- eggNOG: KOG1279
- STRING: 3880.G7J4Z5
- HOGENOM: CLU_004447_4_1_1
Sequences
CDS Sequence
- >Medtr3g088480
ATGCCAGCTTCTCCTTCAGATAACCGAGCCAAATGGAGGAAACGGAAGAGAGAATCACGAATCAACCAGCGTCAACAGAAGCTTCAAGAGGAAGAAGAAGACGACGACGAAGAAAATCCCAATGCCGACGAAGACCACGACCGCGACTACGATTCCGACGACCAACACCACCCTAATTCTCAACCTCAACAAGAAATTGAAGTTCTCTCTGATCACGCTGTTCAGATTTCGCAGTTTCCAATGGTAATTAAGCGTGCTGTCAATCGTCCACACTCTTCTGTAACCGCAATTGTTGCTCTTGAACGAGCTATGGAGTTGGGAGATAGTAAAGCTCAGCTTCAGAACACTCCGTTTCTGGAGAATGTTTCACATGGACAGCTTCAAGCGCTTTCGGCTGTTCCTTCTGATAGTCTTGCTTTGGATCAGGATCGTGCTGAGTCTTCTTATGTTATTACTCCGCCTCCGATTTTGGAAGGACGTGGTGTTGTTAAACGGTTTGGAAGCAGGGTTCTTGTGCTTCCAATGCATTCAGATTGGTTTTCACCTGGAACAGTACACCGGCTAGAGAGACAAGCAGTGCCGCATTTCTTTTCAGGGAAATCTCAGGATCTTACTCCTGAGAAGTATATGGAATGTAGGAATTATATTGTTGCACTATATATGGAGGAACCGGGGAAGAGGATTACCGCGTCTGATTGCCAGGGATTGCAGGTTGGAGTTGGTCATGAAGATTTGACTCGAATTGTTAGGTTTCTTGATCATTGGGGAATTATAAATTACTGTGCTCGGACGCCAAGTCATGAGCCTCCAAATGCCGTGTCTTGTTTGAAGGAGGATACTAGTGGAGAGATCCGTGTGCCGTCAGAGGCCTTGAAGTCTATAGATAGTTTGATTAAATTTGATAAGACAAACTGCAAGCTCAAAGCAGAAGAAATTTATTCACCGTTGACAATGCATAGTGGTGATGTCCCTGATCTGGACAGCAGAATAAGAGAGCACCTGTCTGAAAATCATTGCAATTATTGTTCTTGTCCTCTTCCTGCTGTATACTATCAGTCTCAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGAAAATTTGTCGTTGGTCATTCAAGTATAGATTTTTTAAGGGTGGATTCATCAAGGGATTATGGTGAACTAGATGTTGAAAGTTGGACTGATCAAGAAACTTTGTTGCTGCTCGAAGCAATGGAGATTTACCATGAGAATTGGAATGAAATTGCTGAGCACGTTGGTACCAAATCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCAAGCATGTCTGTGTCATCCAATGTGATGAATAGAGATGATAATGGAAGATCACACCATTACTCAAACGGAGATTCGGCAGGACCTGTACATCATATCAGAGATTCCGACAGCCGCCTGCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTCTGGTTGCCTTTTTAGCCTCTGCGGTTGGACCAAGAGTAGCAGCTTCTTGTGCTCACGCGGCATTATCAGTAATGTCGGAGGATAATACTGGCTCCCAGACTGAATCATCAGGACATGATAATAGGACAAATCCAGAAAACACACATTCTAGAGATGGTGGCTCTCGAGGAGAAACTGCAATTTCAAATAATCATAATGAGGATAAGGCAAAAGCACCTTGTTCGCGGGAGCAAAGTGAGGGTAGGACAACCCCACTCTCTGCTGAAAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCTGCAGCAATGAAAGCTAAATTGTTTGCCGATCACGAAGAACGAGAAATCCAGAGATTATGTGCTAATATAATTAACCATCAGTTGAAAAGATTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTGTTGATGAAGGAATGCGAGCAAGTGGAAAGAGCAAAACAAAGGTTTGCCGCAGAACGCACCCGCGTTATATCAGCACGTTTTGGAACTGCAGGAACTACACCTGCAATGAATGCATCAGGTGTTGGTCCTTCAATGGCTAGTAATGGCAATAATAGGCAACAAATGATCTCTGCTTCTCCCTCACAGCCCAGCATCTCAGGGTATGGTAACAACCAGCCAATTCATCCACACATGTCCTTTGCCCAAAGACCTTCAATGTTTGGGTTGGGGCAAAGGTTGCCCCTATCTATGATACAACAATCACAATCAGCTTCTTCAGCTCCCATGTTCAATGCCCCTAGTAATGTGCAGCCTGGTACCAATCATCCATTGTTGAGGCCTGTGTCAGGAACTAATTCTGGTTTAGGATAA
Protein Sequence
- >Medtr3g088480
MPASPSDNRAKWRKRKRESRINQRQQKLQEEEEDDDEENPNADEDHDRDYDSDDQHHPNSQPQQEIEVLSDHAVQISQFPMVIKRAVNRPHSSVTAIVALERAMELGDSKAQLQNTPFLENVSHGQLQALSAVPSDSLALDQDRAESSYVITPPPILEGRGVVKRFGSRVLVLPMHSDWFSPGTVHRLERQAVPHFFSGKSQDLTPEKYMECRNYIVALYMEEPGKRITASDCQGLQVGVGHEDLTRIVRFLDHWGIINYCARTPSHEPPNAVSCLKEDTSGEIRVPSEALKSIDSLIKFDKTNCKLKAEEIYSPLTMHSGDVPDLDSRIREHLSENHCNYCSCPLPAVYYQSQKEVDILLCTDCFHDGKFVVGHSSIDFLRVDSSRDYGELDVESWTDQETLLLLEAMEIYHENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSVSSNVMNRDDNGRSHHYSNGDSAGPVHHIRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALSVMSEDNTGSQTESSGHDNRTNPENTHSRDGGSRGETAISNNHNEDKAKAPCSREQSEGRTTPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIINHQLKRLELKLKQFAEIETLLMKECEQVERAKQRFAAERTRVISARFGTAGTTPAMNASGVGPSMASNGNNRQQMISASPSQPSISGYGNNQPIHPHMSFAQRPSMFGLGQRLPLSMIQQSQSASSAPMFNAPSNVQPGTNHPLLRPVSGTNSGLG*