Information report for Medtr3g055090
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.
Homologous
- Arabidopsis thaliana — AT3G13682
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: G7J029
- EMBL: CM001219 , PSQE01000003
- AlphaFoldDB: G7J029
- KEGG: mtr:11423713
- OMA: PYVFWGE
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF373
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: G7J029
- eggNOG: KOG0029
- STRING: 3880.G7J029
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >Medtr3g055090
ATGGCAAGCTCGTCTTCTGAATCTGTTTCGAGGCGTATGTCTCTGAGAAAGAAAGCGAATTATCGTAGTTATGAGGGATTGCTAGATGATGAGCGAATTGATAAGAAGTTGCATAGCACTTTGAAGAAGATGGGTAAAAATACAGATTTTCAGAAAGAAACCAACACCGAGGCTATGATCACCTTTTCACTTGGTTTCCCAATGAATGCTTTGCTTGAGCATGAGGTTCAATCTGGGGTTGTCACAAAATTAGGTGTGAAAGAGCAAAACGATTATGTTGTTGTGAGGAATCATATACTGGCTCGCTGGAGGGGGAATGTTATGAGTTGGTTGACGAAGGAACAGATTAAAGAAACTGTGAGCAAGGAGTTTGAATATTTGATTAATTCTGCTTATGATTACCTTTTGCATAATGGCCACATCAATTTTGGTGTTTTGCGGTCATTTACATCTCATTTTCCTGAGGCGACGAAAGGGACAGTTGTTGTTATTGGTGCTGGCATTGCTGGATTGACTGCGGCAAGGCAACTGTTGTTATTTGGTTATAAGGTTGTCGTTTTGGAAGGTAGGAACCGTCCTGGCGGCAGAGTTTACACTCAAAGGATAGGTAATGAGGATAAGTTTGCAGCCTTAGATCTTGGTGGGAGCGTAATTACTGGAATTCATGCTAACCCTTTAGCGGTTCTGGCACGACAACTATCAATTCCGCTTCATACAGTAAGACCTGATTGCCCTTTATTCAAGCCGAATGGGGATCCGGTTGATAAGGAAATAGATTCCAAGGTTCATTTTGTATTCAATAAGTTGCTTGACCATAGCATGGACCTGAGGGAAATTATGGGTGGGTTTGCAAGTGATACCTCACTTGGCTCAGTCTTGGAGACACTCAAAAATTTATATGTGGTGGCTCAAACTACCAATGAGAAGCAGATGTTTGATTGGCATCTTGCAAATTTAGAGTACGCAAATGCTGGATGTCTTTCAAATCTTTCAGCTGCCAATTGGAATCAGGATGATCCTTATGAAATGAAGGGCGATCATTGTTTTCTTGCTGGTGGAAATTGTAGATTGATAAAAGCTATGTGTGAAGGAATTCCTATTTTTTATGGAAAGACCGTCAACACTATCCGATATGGAAATGAGGGTGTTGAGATTATTGCTGGGGATCAAGTCTTTCAAGCAGACTTCGCCTTATGCACTGTGCCTCTTGGAGTTCTAAAAAAGAAGGTCATTAATTTTGAACCTGAATTACCTGCAAGAAAGCTCGAATCAATTGAGAGAATGGGTTTTGGGCTTCTGAACAAAGTTGCAATGGTTTTTCCTCATGTGTTTTGGGGGGAAGATCTGGACACATTTGGATGTCTCAAGGAAAACAGTCATGATCGAGGGGAATTCTTTTTATTTTACGGTTACCACACTGTTTCTGGGGGGCCAGCACTTATTGCGCTTGTGGCCGGTGAAGCTGCACACGCCTTTGAAACCACCGATCCATCCATCTTACTTAATCGGGTTTTGACAACTCTAAAAGGTATTTTTCAACCTAAAGGCATCAATGTGCCTGATCCAATACAATCAATTTGTACGAGATGGGGAAGCGATCCCTTTTCTTATGGTTCATACTCTCATGTCAGTGTGCAATCATCTGGTAAGGATTATGATATCCTTGCAGAAAACGTGGGAAACCGATTGTTCTTTGCAGGTGAGGCCACTTCTAGGCAATATCCAGCCACTATGCATGGTGCTTTCATGAGTGGCTTGAGAGAAGCTTCTTGCATTTACCAGTTAACCTCTGTTCAGCAACCTTGTCCGAAGAAGTCCTTGTCTAAGAATATAGGACCCAACAGCGGTATCCTGGTTAATTTATTCAAGAGACCTAATTTGGAATTCGGAAATTTTTCTTTCATATCTGATCCTTTATCAGATGATCCACAGTCGAAGGCGATTATGCAATTCACTTTTGGTGGTAATGAAGAAAGTTACAAGGAGATAGTACGCTGCTATCCAGATACCAAAGCGTTGCCATTGAAGGTTTACACTATTTTATCCATTGAACAGGTGGATCGAATGCAGGAAATTACTGGAGGAGATGAAACCATGTTGTCATATTTGACAAAAAACCTCGGGTTGAAGCTAATGGGTTTGAGCGCTTTACTCATTGCCGGTAATGATGTAATAGCTAGCGTTGCTGCCTCCCGAAAAGGTAGATCAAGGAACCGAAAAATTCCCCATAATCCAAAGAAGAAATAG
Protein Sequence
- >Medtr3g055090
MASSSSESVSRRMSLRKKANYRSYEGLLDDERIDKKLHSTLKKMGKNTDFQKETNTEAMITFSLGFPMNALLEHEVQSGVVTKLGVKEQNDYVVVRNHILARWRGNVMSWLTKEQIKETVSKEFEYLINSAYDYLLHNGHINFGVLRSFTSHFPEATKGTVVVIGAGIAGLTAARQLLLFGYKVVVLEGRNRPGGRVYTQRIGNEDKFAALDLGGSVITGIHANPLAVLARQLSIPLHTVRPDCPLFKPNGDPVDKEIDSKVHFVFNKLLDHSMDLREIMGGFASDTSLGSVLETLKNLYVVAQTTNEKQMFDWHLANLEYANAGCLSNLSAANWNQDDPYEMKGDHCFLAGGNCRLIKAMCEGIPIFYGKTVNTIRYGNEGVEIIAGDQVFQADFALCTVPLGVLKKKVINFEPELPARKLESIERMGFGLLNKVAMVFPHVFWGEDLDTFGCLKENSHDRGEFFLFYGYHTVSGGPALIALVAGEAAHAFETTDPSILLNRVLTTLKGIFQPKGINVPDPIQSICTRWGSDPFSYGSYSHVSVQSSGKDYDILAENVGNRLFFAGEATSRQYPATMHGAFMSGLREASCIYQLTSVQQPCPKKSLSKNIGPNSGILVNLFKRPNLEFGNFSFISDPLSDDPQSKAIMQFTFGGNEESYKEIVRCYPDTKALPLKVYTILSIEQVDRMQEITGGDETMLSYLTKNLGLKLMGLSALLIAGNDVIASVAASRKGRSRNRKIPHNPKKK*