Information report for Medtr1g063040
Gene Details
|
|
Functional Annotation
- Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.
Homologous
- Actinidia chinensis: CEY00_Acc17216
- Glycine max: Glyma.19G240700, Glyma.03G243400
- Gossypium hirsutum: Gohir.D13G177400, Gohir.A13G171600
- Juglans regia: Jr11_01510
- Populus trichocarpa: POPTR_013G032100v3
- Prunus persica: PRUPE_6G336100
- Rosa chinensis: RchiOBHm_Chr3g0452661
- Vitis vinifera: VIT_14s0030g01250
Gene Resources
- Pfam: PF19273 PF08389
- UniProt: A0A072VJE3
- RefSeq: XP_013468132.1
- EMBL: CM001217
- AlphaFoldDB: A0A072VJE3
- InterPro: IPR011989 , IPR013598 , IPR016024 , IPR045065 , IPR045478
- PANTHER: PTHR11223 , PTHR11223:SF3
- SUPFAM: SSF48371
- Gene3D: 1.25.10.10
- STRING: 3880.A0A072VJE3
- HOGENOM: CLU_004265_0_0_1
Sequences
CDS Sequence
- >Medtr1g063040
ATGAAAGCAAGTGGTGATATACGGACATTACCGACCACATTGTTCCTTCTGGTGAAAAAGAATTGGTCATCTGAAATCCGGTTGCATGCTTTTAAGATGCTGCAGCATTTGGTGCGGTTAAAGTGGGAGGAATTAAGCCCGAAAGAGCACAAAAACTTTGCGAAACTCTCCATTGATTTAATGTATGAGATTGCAGATCCTTGTGAAGACTGGACTCTTAAAAGTCAGACATTGCTTCTTATTCTGTCACATTTGCAATTTCGCTTGATAGTTAGAAGAGAGGGTCTTGTTCTATTATGGCATGAAGAAATGCTTCCAATCTTTGGTTACTCTATCCAGCAAGGGTCCAATACAAGTAAATTTCAAGCTGAGTTGGTTTCAATGATGCTGCGGTGGCTTTCTGAGGACATTACAGTTCACAACGAGGACTTAGAAGGTGACCGCCGAAGGCTACTTTTGCGCTGGGTAACTCAATCATTGCCAGAAACTTTGCCTCTATTACACACTTTACTAGAAAAACACTGTACAGCTGCACTAAGTGAAGCCAGTAGAAAACAGATCGACGTTGCCAAATTGCATGCTGCTGCAGTAACAGCTACTTTAAATGCAGTAATTGCATATGCTGAGTGGGCTCCATTGACTGATCTTGCGAAGTCTGGTATCATTAATCTTTGTGGTTTCCTACTATCTGCTCCAGAATTTCGTCTTCATGCTTCTGAGTTTTTCAAACTTGTTTCATCAAGGAAGAGATCTGTTGATGCATCTGCTTCTGAAATTGACCAAGTTATGAGGGACATCTTTCAAATATTAATGAATATATCTAGAGAGTTTTTGCACAAATCTGGTTCAGGTCTCGGCTCCATGGATGAGAGTGAATACGATTTTTCTGAATGCATATGTGAAAGTATGGTGTCACTGGGTTCCTTTAACTTGCAAAGTATTGCCGGAGATAGTGCCGTATTTTCACTCTACCTAGAACAGATGCTAGGTTTTTTCAAAAACTACAAGTTTGCAATTCATTTTCAATCCCTGCAATTCTGGCTGGTGCTAATGAGGGATTTAACGCCAAAGCCAAGAAGTTCCACTCATTCAGCCTGTGACAGTCCATCTGTTAGTTGCTCCGGTTCTGAAAATGCAAAGAAGAAGGACACTTTCTTCACATTCTCAAAAGAGAATACATCTCTTTTGAGTGATGATTTTTGTAGTGCAATGTTGGATACATCTTTCCTTCATATTCTCAAAAGAGAGAAAACTCTGCCTGGAACTGCACTTTCTTTAGTGGCACCAGAGTTGTGGAGTGACGATTTTGAGGACAAGGGTCAATTCATCCAGTATCGTTATAGTCTGTTGGAGCTGATTAGATTTGTTGCTTCGTACAAACCCCTGATAGCTGCTGCTAAAGTTTCTGAAAAAATTGATACAATAATCAAGAGTTTCTTGCTTTCACCATCGCCGTCTCAGGACTTAGCTGCGATCGAAAGCATGCCTTTGGCTTTAGAGAATGTTGTAAATGCAGTTTTCGGTGGATCCAACGATATGGCCGAGGAGAACGCTGAAGTTCAGTTAGAATTATGCAGAACATTTGAAGGCTTACTCCAACAATTTATTTCCTTGAAATGGACGGAGCCTGCACTTGTGGAAGTACTTGTTCACTATTTAGATGCAATGTGTCTCTTTTTGAAGTATTCTCCGGATGCAGCTGGCAGTGTTATCAATAAACTATTTGAACTTCTAACATCTCTTCCACTTGAAATTAAGGAGACATCAACATCAAGTGCTCGGCATGCAAGGTTACATATCTGTTCATCATTTATTCGGATAGCAAAAGCTACTGACAAAAGCATCTTGCCTCATCTGAAGTTGTTCACAGTACTTCCCGCCGGACTAATAAGTTTGCTGTGCTATATAACTGGTTATGACGTTATGTTCAGTTGTTCACAATATAATGTACTGGGCTTGTCAATAACCATTGGGGATTCATTTTTCAAAAACTTGGATGTGCACTTTGTTGCAGTTGCCCTGATGGAGAATATACAGTCAATGGAGTTTAGTCATTTGAGGGAACTTGTTCATTGCATTTTGATTCCGTTGGTTAAAAATGGTCCTGTCGATATGAGGGAGATTTGGCTGGAAAAGCTTCTGCACCCATTATTTGATCATGTTCAGCAAGCTCTTAGCTGTTCATGGTCAAGTCTTCTGCAAGATGGTAGAGCAAAGGTTCCTGATACTCATGGCATTCTTAGTGGATCAGACCTGAAAGTACAGGTGATGGAGGAAACACTTTTGAGGAATCTAACACGTCAGATTTGTTCACTCCTCTCTGTGATTGCTTCTCCTCCCCTAAATACTGGAATCCCTTCTTTGGAACAGTCTGGGCATATTATTCCTTTCGACATGTCTTCTGTGAAAAGCTTGGATGCAGTTGCATCATGCTCTTTGGTTGGGTTCCTGCTGAAGCATGAAGGTCTTGCCCTTCCAACGTTAAGAATGTGTTTAGAAGTTTTTAAATGGACAGATGGTGAAGCCGTGACAAAGATTTCTTCTTTTTGCTCTGCGATGGTAGTTCTTTCAACAGTAACAAACCATACCAAACTCGTAGAATACGTTTCTACAGATCTTTTTACATCCGTTATTCAAGGATTAGAGCTCGAGTTGAATGCAATAATCAGTGCTGATCTAGTTGAAATTTGTCGAGAGATATTTGTATATCTTGGTGATAGACACCCAGCTCCCAGGAAGGTTTTGCAGTCTCTCCCATTTATTACTTCTCGTGATTTACATGCCTTCGAGGAATCTTTGTCGAAAACGTCAAGTCCAAAGGAACAAAGGCAGCACATGAAAAATTTGCTTCTGATGGCAACTGGTAACAAATTAAAAGCACTTGCAGAACAGAAACGCAGGTTGAAACTTACAGGAGCCCGAGACCCCGACAACTGCTGCTAA
Protein Sequence
- >Medtr1g063040
MKASGDIRTLPTTLFLLVKKNWSSEIRLHAFKMLQHLVRLKWEELSPKEHKNFAKLSIDLMYEIADPCEDWTLKSQTLLLILSHLQFRLIVRREGLVLLWHEEMLPIFGYSIQQGSNTSKFQAELVSMMLRWLSEDITVHNEDLEGDRRRLLLRWVTQSLPETLPLLHTLLEKHCTAALSEASRKQIDVAKLHAAAVTATLNAVIAYAEWAPLTDLAKSGIINLCGFLLSAPEFRLHASEFFKLVSSRKRSVDASASEIDQVMRDIFQILMNISREFLHKSGSGLGSMDESEYDFSECICESMVSLGSFNLQSIAGDSAVFSLYLEQMLGFFKNYKFAIHFQSLQFWLVLMRDLTPKPRSSTHSACDSPSVSCSGSENAKKKDTFFTFSKENTSLLSDDFCSAMLDTSFLHILKREKTLPGTALSLVAPELWSDDFEDKGQFIQYRYSLLELIRFVASYKPLIAAAKVSEKIDTIIKSFLLSPSPSQDLAAIESMPLALENVVNAVFGGSNDMAEENAEVQLELCRTFEGLLQQFISLKWTEPALVEVLVHYLDAMCLFLKYSPDAAGSVINKLFELLTSLPLEIKETSTSSARHARLHICSSFIRIAKATDKSILPHLKLFTVLPAGLISLLCYITGYDVMFSCSQYNVLGLSITIGDSFFKNLDVHFVAVALMENIQSMEFSHLRELVHCILIPLVKNGPVDMREIWLEKLLHPLFDHVQQALSCSWSSLLQDGRAKVPDTHGILSGSDLKVQVMEETLLRNLTRQICSLLSVIASPPLNTGIPSLEQSGHIIPFDMSSVKSLDAVASCSLVGFLLKHEGLALPTLRMCLEVFKWTDGEAVTKISSFCSAMVVLSTVTNHTKLVEYVSTDLFTSVIQGLELELNAIISADLVEICREIFVYLGDRHPAPRKVLQSLPFITSRDLHAFEESLSKTSSPKEQRQHMKNLLLMATGNKLKALAEQKRRLKLTGARDPDNCC*