Information report for Medtr1g053955
Gene Details
|
|
Functional Annotation
- Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).
Homologous
- Arabidopsis thaliana — AT3G12810
Gene Resources
- Pfam: PF00271 PF07529 PF00176
- UniProt: A0A072VUA9
- EMBL: CM001217
- KEGG: mtr:25483514
- InterPro: IPR000330 , IPR001650 , IPR014001 , IPR014012 , IPR027417 , IPR038718 , IPR049730 , IPR050520
- PANTHER: PTHR45685 , PTHR45685:SF1
- SUPFAM: SSF52540
- PROSITE: PS51192 , PS51194 , PS51204
- Gene3D: 1.10.10.60 , 1.20.120.850 , 3.40.50.10810 , 3.40.50.300
- OrthoDB: A0A072VUA9
- CDD: cd18003 , cd18793
- STRING: 3880.A0A072VUA9
- HOGENOM: CLU_000315_13_1_1
Sequences
CDS Sequence
- >Medtr1g053955
ATGGCGTCGAAAGGTCCAAGGTCTAAGATTGATCCCGAGTATAAAGTTAAACGGCATAAGGCTGTTGAAGCTTCAAGGGAGCCTAGACGACCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGTGTGGCTATCAAAGGACTTCGAGTCAGAGAGGAAATGGAAATTAGCTCAGGCAAAGAAAGTTGCTTTAAAAGCCAGCAAAGAAGGCATGTTAGATCCAGCTGCAAGGGGTGAAAAGAAGATGAAGGAAGAAGAGCAGCGGTTAAGAAAAGTTGCACTAAATATTTCTAAGGATGTTAAGAAATTTTGGACAAAAATAGAAAAGCTGGTTCTTTACAAACATCAAATGGAACTTGATGAGAAAAAGAAAAAGGCACTTGACAAACAGCTTGAGTTTCTTTTAGGGCAAACTGAGAGATACTCAACTATGTTGGCCGAGAATCTTGTGGATGCTAATGCACCAGCAGAGAAAAATTCTGCAGAGCATCAGATGAGTTTTCAATGCAAAGATATAGGCGGAGACATTATCAATGAACCTAAGGAAGCTAATGTTGAGTATAAATCCGATGCACCTGATCATGATGAAGAATATGATGTACAATCTGACGATGTATCGGATGATGATGAGCAAACGCTCGAGGAAGATGAGGCTCTTATAACTAAAGAAGAACGGCAAGAGGAATTGGCAGCTTTGCACAGCGAAATGGATCTTCCAATTGAGGAGTTACTCAAACGTTATGCTGGAGATAAAGGAGAATTGGCAAGGCAGGAAAGTAGTCCAGAGAGTAGTGAAGATGGTGGACAGATAGTTAGAACTGGTGATCCTGATGGCCAGGAAGAACTTGCATCAGAAAATGGAGATCATATATCTATCAGTGAAATATGTACAAACGACTCCAGCACGGTCCTCGGTCGACGTTGTGATGACAGTAACGGTGATGTGGCTACACCAACAAATAATCTATCTCAAAATGAGGTTCATCAATCTGAAAATCTCAAAGAGGTTCCCAGTGAGGCAGCCAATGAAAATGTTCCATTTGATTTTTCTGACGAAGAGGAAGACGGCGACTTTTTGTTTGGCACAGAGGATAAGGACGATGAAACAACCTTATCCGAGGAAGAAAAACTGGACAGAGTTGATGCAATTGATCCAAAGGATGAGATTGCATTACTACAAAAAGAGAGTGACATGCCTGTTGAGGAACTGCTTGCAAGGTATAAAAAGGACCTGAGTGATGATTGGGATCAGGAAGATGAGTCAGATTGTGCTTCTGCTTCATCAGAAGACCAGCGGAATTCACCAGTCCATGATGATGCTAAGCAGACAGATCCTGATATTTCTGTGGATGAAGATATGAATTCCAGTGAGAAACTGGCTACTGTACAGACACAGGCAGAAGAACAGGGGGAAGCACCTTGTGAAAATTCAGAGGAAAGAGAAAGTGAGGATATAATTGCTGATGCAGCTGCTGCTGCAAGATCAGTACAACCAACTGGAAACACTTTCTCCACAACTAAAGTGCGTACAAAATTTCCCTTTCTACTCAAGTACTCTCTTCGTGAATATCAACATATTGGATTGGATTGGCTCGTTACAATGTATGAAAAAAAGCTGAATGGAATTTTGGCAGATGAAATGGGGCTTGGAAAAACCATTATGACTATAGCTTTGCTTGCACATCTTGCCTGCGAAAAGGGGATTTGGGGTCCACATCTAATTGTGGTGCCAACTAGTGTGATGCTTAACTGGGAGACTGAATTTCTGAAATGGTGTCCTGCGTTCAAAATTTTGACCTATTTCGGAAGCGCAAAGGAGCGAAAACATAAAAGACAAGGATGGTTAAAACCAAACTCATTTCATGTGTGCATAACAACTTACAGATTAGTTATTCAGGATTCCAAAGTTTTCAAGCGCAAAAAGTGGAAATACTTGATCTTAGATGAAGCTCACCTCATTAAAAACTGGAAATCACAAAGGTGGCAGACACTGCTGAATTTCAATTCAAAACGACGAATTCTGTTGACCGGTACACCACTACAGAATGATCTCATGGAACTGTGGTCTCTCATGCATTTCTTGATGCCCCATGTTTTCCAGTCACACCAAGAGTTTAAGGATTGGTTTTGTAATCCTATATCAGGAATGGTCGAGGGAGAGGAAAAAGTTAATAAGGAGGTTGTAGATCGCCTGCATAATGTCCTTCGTCCGTTCTTACTCCGTCGATTGAAGAGAGATGTAGAAAAGCAACTTCCAATGAAACATGAGCATGTCATATACTGTAGGCTGTCAAAGAGGCAGAGGAATTTGTACGAAGATTTTATTGCTAGCTCAGAGACTCAAGCTACTCTTGCGAATGCCAATTTTTTTGGGATGATTAGTATCATCATGCAACTTCGCAAGGTTTGTAATCATCCTGACCTATTTGAGGGCCGTCCAATCGTCAGTTCTTTTGATATGTGTGGGATTCATACTCAGTTAAGTTCTTCTATTTGCTCCATGCTTTTGCCTAGCTCCTTTTCTACAGTCGACTTAGAAGGTTTGGGTCTTCTATTTACTCATCTTGACTATAGCATGACATCTTGGGAGAGTGATGAAGTGCAAGCTATTGAGACCCCTGCAACTTTAATTATGGAACGCACTGATAGGGCTGACCTGGAAGTAATTAAGCCCGGACTGAAATGTCAGAAAAAGCAGTTAGGAACAAACATTTTTGAAGAGATTCAAAAGGCAATTTGGGAAGAGAGGATAAGAGAGGCAAAGGAACGTGCAGCAGCTATTGCATGGTGGAACTCCTTGAGGTGTAAAAAAAGACCCATCTACTCAACGACTCTAAGGGACCTTGTTACCATAAGGCATCCTGTATATGATATTCATCAAAAGAAGGCAAACCCTGTTTCATACTTGTTCCCATCAAAACTGGCTGACATTGTTCTCTCCCCAGTTGAACGATTTCAGAGGATGATTGATGTGGTTGAAAGTTTCATGTTTGCGATTCCTGCTGCCCGAGCATCCCCTCCTGTTTGCTGGTGCAGTAAAAGCGAGACAACAGTGTTTCTGCACCCATCTTACAAGCAGCAATGCTCTGATATTCTGTCACCACTATTGTCACCCATCAGGCCCGCAATTGTTCGTCGGCAAGTATATTTCCCAGACAGGCGACTTATACAATTCGACTGTGGAAAATTGCAGGAGCTAGCGATTTTGCTGAGGAAATTAAAATCAGAAGGTCACCGAGCTCTGATATTCACTCAAATGACTAAGATGCTTGACATATTAGAAGCCTTCATTAATTTGTATGGTTATACTTACATGCGCTTAGATGGATCAACCCAACCAGAGGAGAGGCAGACCTTAATGCAGCGTTTTAACACAAACCCCAAATATTTTCTTTTCATCTTGTCAACTCGTAGTGGGGGTGTTGGTATCAATCTAGTTGGAGCTGACACAGTTATTTTTTATGATAGTGACTGGAATCCTGCTATGGATCAACAAGCTCAAGATCGGTGCCACAGAATTGGCCAGACGCGTGAAGTCCATATATATCGATTGATTAGTGAGAGCACCATTGAGGAAAATATTTTGAAGAAAGCAAAGCAAAAGCGCGCACTTGATGATCTGGTTATACAGAGTGGGGGTTATAATACTGAGTTCTTTAAGAAGCTTGATCCTATGGAACTATTTTCAGGTCATAGAACACTCTCAATTAAAGATACGCCGAAGGAGAAAAACCAGAACAGTGGAGAAGTTTCTGTAACTAATGCAGATGTAGATGCTGCATTAAAACATGTCGAAGATGAGGCAGATTATATGGCCCTGAAGACACGTGAACTGGAAGAAGCTGTGGATAACCAGGAATTTACAGAAGAAGCCAGTGGGAGACTTGAAGAGGATGAGTATGTAAATGAGGATGATGAGCCTCAAGAGTTGGGTGAATCTGTCTCCAATTTGAATAAAGAGAATGAATTAATGTTAAATGGAGGTGATCCTAACGAAGATAAACTACCCGCTGTTGTTGCCAAGGATGATGATGTTGACATGCTGGCAGATGTCAAACAGATGGCGGAAGCTGCAGCTGCAGCTGGACAGGCTTTATCAGCCTTTGAGAATGAGCTACGCCCTATTGACCGATACGCCATTCGTTTTCTAGAGCTGTGGGATCCAATTATAGATAAGGCAGCCTTGGAATCTGAAGCCAGGATTGAGGACACTGAGTGGGAATTGGATCGCATTGAAAGGTATAAGGAGGAGATGGAAGCCGAAATTGACGAAGATGAGGAGCCTCTTGTATATGAAAGCTGGGATGCTGATTTTGCAACAACGGCTTATCGGCAGCAAGTAGAGGCCTTGGCTCAACATCAGTTAATGGAGGAACTTGAATATGAAGCTAAACTGAAAGAGGAAGCTGAAGAAGAGAAAAACAGGACTCAAGCACCAAGTGAGTCAAAGCCCAAGCCTAAAAAGAAACCAAAGAAAACAAAGTTCAAATCTCTGAAGAAAGGATCTCTAACCTCTGGTGTAAGAACTGTGAAAGACGAGCTACGAGCAGTGCCAATGGTCATAGATGATGATGATGTTGTCACTAGTCCTGATTTTGTGTCTCCAAGTTCAAGTATGCATAAAAAACGCAAGAAGTCTAAATTAACAGCTGATGGTGAAGAAGAAAAGAGATCTAAGAAGACCAAAAAGTCCAAGAGGGATCTTCTTGACATCTATGATTCAGATTTAGAATCCAACTCATTAGATATGCAGGATGAACATGCAGAATCAGATCCATATAAAAGTCTGGTTGTGTCGGAACAGAAAACAGTTGGCAGGAGTAGGATGGGAGGAAAAATAACCATCACTCCAATGCCTGTGAAACGTGTGTTTATAATAAAATCAGAAAAACTGAAGAAGGGAAATATTTGGTACAAAGATTGTATTCCATCAGCTGATTTTTGGTTGCCTCAGGAGGATGCAATATTATGTGCAGTTGTTCATGAATATGGTCCTAACTGGAGCTTTGTTAGTGAAATCCTTTATAGCATGACTGCTGGGGGGGCATATAGGGGGAGATTTCGTCATCCTGTCCATTGTTGTGAGAGGTTCAGAGAATTATTCCAAAAATACATCTTGTTCTCTATGGACAATGCAAATCATGAGAAAATCAACTCTACAACCTCTGGAAAGGCTCTTAAAGTAACAGAGGATAACATTCGGATATTGTTAGATGTTGCTTCTGAGCAGGCAAATAGAGAGTTATTACTGCAGAAGCACTTTTTTGCGTTGCTTTCTTCTGTCTGGAAGGTGGGGTCACGTGTTGACCGCAGGCAAAATCCACCTGCCACTTGCAATGGTCTCTATTTCGATCAGAGTTTTTTCACTTCAATTGGCCAGCACTCACAAAATCCCCCAAACAAACCCTATGACAGGATGACGTTTGCTAATTCAGCCCAGAGCAAGAAGTTAATTGCAGCTGCACTGGATGACATGAGAAGTAGGCCAGAGAATGACAAAATATTCCTCTCTAACCAGGGTGAAGACATGCCGGTGAGTGCAGATCAGGTGGATATAACTCTGGAGTTCCCGAAAGAGGAAAGTGATTCCTTATCCTCATTTCCATCTGTTATAAAGTTATCAATAAAAGGGGATGAAGCGCCACCGTCTTTAAAGCACACAAGAGATGATCATCTTAAAATGTGTTATTCTGCTGCTGAGAATCGTTTCAGGGATATAGCAAAAGCTTGTGAAGAAGACAGTTCTGGATGGGCTTCACCGACAAATGATGCAAGGTCTCGACCTGGTTCCAAGATACAATCTTCTGGAAAGCAAAGGTCTTCCATCTCCGACATTACTAAGCTGTCAAGGTCAAAGACCAAAAGAGCTTCAGTGGATTCTAATGAAATGCATCGCCATCAGGCTGAGTTATTGCCGCCAGTGCCATCGCTTCATGAACTGACACTGGATCTCCCTTCATCCACTATGGACGAATTTGGATTTAACATGGATAGCAATTTCACCTTTGATTTGAATGAGGAAAGTTCATTGGAAAGGGAAAATTTTGGAGTGGTCCCCCATGATTATGTAGCTGAGTTAATCCCAGGCCTTGATGATTGTATAGCATTCTCTGAATATACTGATATTAGATAA
Protein Sequence
- >Medtr1g053955
MASKGPRSKIDPEYKVKRHKAVEASREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALKASKEGMLDPAARGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDANAPAEKNSAEHQMSFQCKDIGGDIINEPKEANVEYKSDAPDHDEEYDVQSDDVSDDDEQTLEEDEALITKEERQEELAALHSEMDLPIEELLKRYAGDKGELARQESSPESSEDGGQIVRTGDPDGQEELASENGDHISISEICTNDSSTVLGRRCDDSNGDVATPTNNLSQNEVHQSENLKEVPSEAANENVPFDFSDEEEDGDFLFGTEDKDDETTLSEEEKLDRVDAIDPKDEIALLQKESDMPVEELLARYKKDLSDDWDQEDESDCASASSEDQRNSPVHDDAKQTDPDISVDEDMNSSEKLATVQTQAEEQGEAPCENSEERESEDIIADAAAAARSVQPTGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGEEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLANANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIHTQLSSSICSMLLPSSFSTVDLEGLGLLFTHLDYSMTSWESDEVQAIETPATLIMERTDRADLEVIKPGLKCQKKQLGTNIFEEIQKAIWEERIREAKERAAAIAWWNSLRCKKRPIYSTTLRDLVTIRHPVYDIHQKKANPVSYLFPSKLADIVLSPVERFQRMIDVVESFMFAIPAARASPPVCWCSKSETTVFLHPSYKQQCSDILSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKAKQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLSIKDTPKEKNQNSGEVSVTNADVDAALKHVEDEADYMALKTRELEEAVDNQEFTEEASGRLEEDEYVNEDDEPQELGESVSNLNKENELMLNGGDPNEDKLPAVVAKDDDVDMLADVKQMAEAAAAAGQALSAFENELRPIDRYAIRFLELWDPIIDKAALESEARIEDTEWELDRIERYKEEMEAEIDEDEEPLVYESWDADFATTAYRQQVEALAQHQLMEELEYEAKLKEEAEEEKNRTQAPSESKPKPKKKPKKTKFKSLKKGSLTSGVRTVKDELRAVPMVIDDDDVVTSPDFVSPSSSMHKKRKKSKLTADGEEEKRSKKTKKSKRDLLDIYDSDLESNSLDMQDEHAESDPYKSLVVSEQKTVGRSRMGGKITITPMPVKRVFIIKSEKLKKGNIWYKDCIPSADFWLPQEDAILCAVVHEYGPNWSFVSEILYSMTAGGAYRGRFRHPVHCCERFRELFQKYILFSMDNANHEKINSTTSGKALKVTEDNIRILLDVASEQANRELLLQKHFFALLSSVWKVGSRVDRRQNPPATCNGLYFDQSFFTSIGQHSQNPPNKPYDRMTFANSAQSKKLIAAALDDMRSRPENDKIFLSNQGEDMPVSADQVDITLEFPKEESDSLSSFPSVIKLSIKGDEAPPSLKHTRDDHLKMCYSAAENRFRDIAKACEEDSSGWASPTNDARSRPGSKIQSSGKQRSSISDITKLSRSKTKRASVDSNEMHRHQAELLPPVPSLHELTLDLPSSTMDEFGFNMDSNFTFDLNEESSLERENFGVVPHDYVAELIPGLDDCIAFSEYTDIR*