Information report for LR48_Vigan477s002500
Gene Details
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Functional Annotation
- Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.
Homologous
- Glycine max: Glyma.03G009200, Glyma.07G070700, Glyma.18G232900, Glyma.09G259400
- Juglans regia: Jr07_06640, Jr07_06650
- Manihot esculenta: MANES_05G034300
- Medicago truncatula: Medtr8g030800, Medtr7g077700
- Prunus persica: PRUPE_2G170500
- Vitis vinifera: VIT_15s0046g02510
Gene Resources
- Pfam: PF09497
- UniProt: A0A0L9TBS4
- EMBL: JABFOF010000009 , KQ258405
- KEGG: var:108321194
- OMA: DCEDCAR
- InterPro: IPR019035
- PANTHER: PTHR46567 , PTHR46567:SF1
- OrthoDB: A0A0L9TBS4
- STRING: 3914.A0A0L9TBS4
Sequences
CDS Sequence
- >LR48_Vigan477s002500
ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGTGCAATTGGTGGACCTTCTACTAGGGACACGGGAAGATCTGATTCACCTTCTTTGCCTGCTAACTTCTCTGTAAGTTCAAGGCGACAACCACCATTAAACCCATACAAGTTGAAGTGTGATAAAGAACCCTTGAACTCTAGGCTTGGGGCACCAGACTTTCATCCCCAAACATCAAATTGTCCCGAGGAGACCTTGACCAGAGAATATTTGCAATCTGGATACAGGGACACAGTTGAGGGACTTGAGGAAGCCAGAGAAATTTCTCTGACGCAGGTTCCACATTTTAACAAGAATGTTGTTCTTGATTGCAAAGAGGCTATTAGAAAACGTTTGAGGGCCATCAATGAATCTCGTGCTCAGAAGAGGAAGGCTGGTCAAGTATATGGTGTAGCTCTTTCAGGATCTCAACTTGCCAGGTCTGGAATTTTCCCAGAACTAAGACCTTGTGGTGAGGACTTCCAGAAGAAATGGATTGAGGGTTTATCTCAGCAGCACAAGCGGTTACGCTCTTTAGCTGATCATGTTCCTCATGGTTACAAAAGGGCATCACTTTTAGACGTTCTTATAAGGAATAACGTTCCATTGCTTAGGGCCACCTGGTTTATCAAGGTTACTTACCTCAATCAGGTTCAACCTGGTTCTGTTGGTATTTCTTCTGGAACTGCTGACAAGATTCAACTCTCACGTTCCGATGTTTGGACCAAAGATGTTATCAATTACTTGCAAGCCCTTCTGGATGAATTTTTGTCAAAGAATGTTTCCCATTCTGCTTGTCATGGTAGAGAGCGATCACCACAAATACCTGGACCACTGCAGAACAAAAGTGATCCATTATTATCTGTTACTGATGGTGAAGGACCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTTCTGCAATGGCATCATGCTGAAGGGCTGCTTCATCCATCTCTTGTCATTGATTGGGTGTTTACTCAACTACAGGAAAAAGATTTGCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGTTTTTTAGAAACTATTGTACTATCTCAAACTTATGTGCGTACCCTTGCTGGACTAGCTCTTCGTGTCGTTCGTGATCCTGCTCCAGGTGGTTCAGATCTGGTAGATAATTCCAGGAGGGCATACACAACTTGTGCTGTGATTGAGATGCTTCAGTATTTAATACTTGTGGTGCCAGATACTTTTGTTGCTTTGGATTGCTTTCCTTTACCTTCTTCTGTTATTTCTCATGCAATGAACGATGGGAATTTTGTACTAAAATCAACTGAAGCTGCAGGCAAGGTAAAAAATAGTTCAGATGATTTTGGTCGCATTATTTCACGCATTCAGAAACATACAGAGGATCTTGCTAAGGCTTCAATCCCAGGCTCTCCAGGTCATTGTCTGGCTAAAGTGGCAAAAGCCTTGGATAAGGCTGTTGTTCTGGGTGATTTGCATGTTGCATATAAATTTCTTTTTGATGATCTTTGTGGTGGAACTGTATCTGAAGGCTGGGTTGCAAAAGTCAGCCCTTGCTTAAGGTTATCTTTGAAATGGTTTGGGACTGTGAATACACCCCTTATATATTCTGTGTTTTTCCTTTGTGAGTGGGCAACATGTGATTTTAGGGATTTTCGTGGTTCCCCTCCTCATGACATTAAGTTTACTGGTAGGAAAGATCTTTCCCAGGTGCATATAGCTGTTAGGCTTTTAAAGATGAAGATTAAGGATGTGAAGATTTCACTGAAACAAACAAATGAATATCACAGAGCCAGTCATTTTGCAAAGAATTCGGGGCGGCGGCCTAATTCAAATTATGTGGGTAAAGTATCCAGACTGAAATCTAGTTCAAAAAGTACAGGTTCTTCAGTTATATTTGAAAGCCCAGGACCACTTCATGATATTATAGTATGCTGGATTGATCAGCATGTGGTACATAAAGGGGAAGGTTCCAAGCGCCTACAACTATTTATGGTGGAACTCATACGTGCTGGCATCTTTTATCCCTTGGCATATGTACGCCAGCTGATAGTCAGTGGGATCATGGATGCGAATGTAAATTTGGTTGACATGGAGCGACGGAGGAGACATTATCGCATCTTAAAGCAGTTACCTGGATGCTTTATCCATGATGTTTTGGAAGAGTCAGGAATTGTTGATGGGGTGCATCTCAAAGAAGCATTACAAATTTACTTGAATGAACGTCGCCTTATACTTCGGAGTCCTCTTAGTGAGTCCCATGATGATGCCAGCGGTACTGATTTACCTCTTCTAAAGAGAAAAAAATATCCTGCTTCAATAAAGGATGAAGTTTCTGGAATTACAATTGATCAGAGAAATGTTATTTCTACCACAAAAAATGTAAAGGATAATGCTAAGATTGAAGAACTAAGAACAGCTATTTCAGTACTGTTACAGCTACCTAATTGTTCATCTAATTTGAGTGCTACAGGCTGTGATGAATCTGAAGGCACTGTTAGAAGATCTATTGGGTCTCAGAACAGCAAAATTGATCCAGTGGAGGGTACACCTGGGTGTGAAGAATGTAGCAGAACAAAGAGACAAAAGTTAAGTGAGGAAAGAAACTCATTCGTACAAGGGCATTCCCCAGTTCAATCTGATGATGACGATGTATGGTGGGTGAAAAAGGGAATGAAATCCCCGGAGCCTCTCAAAGTTGATCAACCACAAAAGTTAACCAAGCAGGTCACGAAGAGTAGGCAGAAGAATGTGCGTAAAACTCAGAGTCTCGCTCAACTGGCAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCAACTAGTCATGTTTGTGGAAGCAAGGTAAACTGCCCTCACCATAAAACTACTATGGATGTGGATGGGCAGAGGTCTGTGGATATCATCCCGACAAGTCATTTTGGAGATATAGTTTCCATTGGAAAAGCTCTAAAGCAGCTACGTTTTGTTGAGAAAAGGGCAATAGCCATTTGGCTGCTGAGTGTTGTTAGACAGGTAATTGAAGAAACGGATAAAAATATTGGTAAAGTTGGTCAGTTTGGCAGGCCTTTTTCTGTTGCTGATGATAGAAGCTCAATACGGTGGAAACTGGGTGAGGATGAACTTTCTGTGATACTGTATTTGATGGATATCTCCCATGATTTGGTATCAGCTGTCAAGTTCCTCCTTTGGTTGCTGCCGAGGCTTCTTAATAGCCCCAATTCCACAATTCATTCTGGGAGGAATGTGCTGATGCCAGCAAGGAATGCGGAAAACCAAGTTTGTGACGTGGGAGAGGCTTTTCTGCTTTCATCACTGAGAAGGTATGAGAACATTCTTGTTGCAGCAGATCTTATTCCAGAAGCCTTGTCATCTGCAATGCATCGAGCTGCCACAATTGTTGCATCTAATGGAAGAGTTTCAGGGTCAGGGGTCCTAGCTTTTGCTCGGTACTTGTTGAGAAAATATGGCAATGTGGCTAGTGTCATTGAGTGGGAGAAAACTTTTAAGGCTACATGTGACACAAGACTTTCCTCTGAACTTGACTCTTGTAGATCAGTGGATGGAGAGTTAGGGCTGCCCCTAGGCGTTCCAGCAGGAGTAGAAGACCCTGATGATTTTTTCCGTCAGAAGATCAGTGGTGGTCGGTTGCCATCCAGAGTAGGTGCAGGCATGAGGGAGGTTGTGCAGCATAAGGTTGAAGAAGCATTCCGCTTTCTTTTTGGAAAGGATAGAAAGCTCTTTGCTGCTGGTACACTAAAAGGTCTTCCTCCTGTAGAAAAATGGGACAATGGATATCAAATTGCTCAACAAATAGTTATGGGTTTGATTGATTGCATAAGGCAGACTGGTGGTGCTGCTCAAGAAGGAGATCCCTCTTTGGTCTCTTCTGCAGTTTCTGCAATTGTTGGCAGTGTTGGTCCAACTTTAGCAAAAATCCCTGATTTTTCATCTGGCAGCAATCATTCAAATATAACATCAGCTTCAAATTTATTGAACGATGCCAGGTGCATTCTGCGAATGCATATAACCTGTCTAGGCCTGCTTAAGGAAGCCTTAGGAGAACGACAAAGCCGTGTATTTGATATTGCACTTGCTACTGAAGCTTCTACTGCTCTAGCTGGCGTTTTCACTCCTAGTAAAGCATCTCGTTCTCAGTTTCAAACATTTCCTGAAGTCCATGATTCTAGTAACACTATTTCAAATGATATGGGAAGCAACTCTAATAAAGTCGTGGTAGCAAAAACCACAAAAATTGCTGCGGCTGTTTCTGCGCTTTTTGTTGGTGCAATTATATATGGTGTTACCAGCCTGGAAAGAATGGTAACAGTTCTCAGATTGAAGGAGGGTCTCGATGCAGTACAATTTGTAAGAAGCACTAGATCCACTTCAAATGGAAATGCTCGTTCAGTTATGGCTTTTAAGATGGATAGTTCAATTGAAGTTCATGTCCATTGGTTTAGACTGCTAGTTGGAAACTGCAGAACAATATGTGAAGGGTTGGTGGTGGAACTCTTGGGTGAACCATTTATTATGGCTCTTTCAAGGATGCAACGTATGCTTCCTTTAAATTTGGTCTTTCCACCTGCTTATTCAATATTTGCCTTTATTAGGTGGCGGCCTTTCATTTTGAATGCTACAGTTCGTGAAGACATGAATCAAATTTATCAGTCTCTTATAGTGGCCATAACTGAAGCAATAAAGCATTTGCCTTTTCGTGATGTATGTTTTAGAGATTGTCAGGGTCTTTATGATCTTATGTCCGCAGACAATAGTGATTCTGATTTTGCAAACCTGCTAGAGTTTAATGGTTCTGACATGCATTTAAAACTCACAGCATTTGTTCCTCTACGCTCCAGGCTTTTCCTTAATGCCATTATTGATTGTAAGATGCCACAGTCTATTTATGCAAAGGATGATGGGAGCCGGATTTCTGGACCTGGTGAGTCTAAAGTTAAACCCACAGATAGTGGGTCTAAGCTTCAGGACATGCTTGTGCATATTTTGGATACCTTGCAACCAGCTAAATTTCACTGGCAGTGGGTTCTCCTCAGGTTACTTTTAAATGAACAAGCCCTCATTGAAAAAGTGGAGAATCATGATGTGCCCTTGGCTGATGCTATAAAGTTGTCCTCACCTAGTCCTGAGAAGGCTGCTAGTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACTAGGTTACTGGTTAGACCTGATGCTGCACCCCTTTTTGCAGAATTGATTCATCTCTTTGGTAGGTCACTAGAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGCCAGGATGTCCTCTTTGGCCGGAAGGCCATTAGACAAAGGCTGCATAACATTGCTGTTAATAAAAAACTTTCTGTTAAGACCCAATTTTGGGAACCTTGGGGTTGGTGTAGTCCGACTACTGATTCATTGACTATCAAAGGGGATAACAAGAAGTTTGACAGCACCTCTCTTGAAGAAGGAGAAGTTGTTGAAGAGGGAACATATTTGAAAAGGTGCCAGCAGCAAGTGATTGAGAGGGCTCTTATCGAGTTGCTTCTTCCTTGCATAGATCAAAGCTCTGATGAAGCTCGCAATTCTTTTGCAACTGACTTAGTGAAACAGTTGAATTATATTGAGACACACATAACTGCTATTACAGGTGGAAGTAAACCAGTGGGAAGTGCTCCTGCTGGAGTTGAAGGTCAGCCAAATAAAGTTAATAACCGCAAAAATTTGAGAACTGGAAGTGCTGCATTATCTAGACGACCAACAGTGGCAACAGATTCTTCTCCACCATCTCCTGCAGCCCTACGAGTTTCTATGTCATTACGTTTGCAGTTGCTCCTGAGATTTCTTCCTACTCTTTGCACTGACAGGGAGCCATCTGTGCGGAGCACAAGACAATTTCTTGCCTCTGTTATTTTTCGTCTCCTTGGTAGTCGGGTTGTGCATCAGGATGCAGACATTTCAGCAAATGCTGTGCCTCTGCCAACGAGGGAGGCAGAGTCATCTTCTGAAGTTGCTTCTGCTGCTTTCGTGGATTCTTCTTCTCAGAGTCTGTTTGATCGTTTGCTGTTGGTTTTACATGGGTTGCTAAGTAGTTATCCTCCAAGTTGGCTCCGACCAAAGCCTTCAAAGACAAACAATGAACCTACAATTGATCGAGAATTGTTGGAGACTTTGCAGAATGAATTGGATCGTATGCAACTACCAGACACTGTTCGGTGGAGAATCCAAGCTGCAATGCCAGTACTCATACCGTCTATGCGGTGCTCTCTATCCTGCCAGCCACCATCTGTTTCAAATTCTGCTCTTATGTGCATTCAACCCGGCACTGCAAATCCTGGGGTTAACCCCAGTAGCTCAACCATCCCCCAGAGGGGTCCAGCTCTATCAAGGGTTGCATCTAATGTATCAGGGAAACCAAAACGACAGGACAATGATTTGGAAATTGATCCTTGGACTCTTTTAGAAGATGGCGCTGGCTCTATCCCTCTGGCAGGTAATACTGCTAGCCTAGGAAGTGGTGATCATGTTAACATTCGAGCCGCAAGCTGGCTTAAAGGAGCTGTAAGGGTGAGACGGACCGACCTCACATATGTTGGTGCGGTAGATGATGATAGTTGA
Protein Sequence
- >LR48_Vigan477s002500
MQRYHAGSCTSAVNNSAIGGPSTRDTGRSDSPSLPANFSVSSRRQPPLNPYKLKCDKEPLNSRLGAPDFHPQTSNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKNVVLDCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLARSGIFPELRPCGEDFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRSDVWTKDVINYLQALLDEFLSKNVSHSACHGRERSPQIPGPLQNKSDPLLSVTDGEGPSLHFRWWYIVRLLQWHHAEGLLHPSLVIDWVFTQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALRVVRDPAPGGSDLVDNSRRAYTTCAVIEMLQYLILVVPDTFVALDCFPLPSSVISHAMNDGNFVLKSTEAAGKVKNSSDDFGRIISRIQKHTEDLAKASIPGSPGHCLAKVAKALDKAVVLGDLHVAYKFLFDDLCGGTVSEGWVAKVSPCLRLSLKWFGTVNTPLIYSVFFLCEWATCDFRDFRGSPPHDIKFTGRKDLSQVHIAVRLLKMKIKDVKISLKQTNEYHRASHFAKNSGRRPNSNYVGKVSRLKSSSKSTGSSVIFESPGPLHDIIVCWIDQHVVHKGEGSKRLQLFMVELIRAGIFYPLAYVRQLIVSGIMDANVNLVDMERRRRHYRILKQLPGCFIHDVLEESGIVDGVHLKEALQIYLNERRLILRSPLSESHDDASGTDLPLLKRKKYPASIKDEVSGITIDQRNVISTTKNVKDNAKIEELRTAISVLLQLPNCSSNLSATGCDESEGTVRRSIGSQNSKIDPVEGTPGCEECSRTKRQKLSEERNSFVQGHSPVQSDDDDVWWVKKGMKSPEPLKVDQPQKLTKQVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCGSKVNCPHHKTTMDVDGQRSVDIIPTSHFGDIVSIGKALKQLRFVEKRAIAIWLLSVVRQVIEETDKNIGKVGQFGRPFSVADDRSSIRWKLGEDELSVILYLMDISHDLVSAVKFLLWLLPRLLNSPNSTIHSGRNVLMPARNAENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMHRAATIVASNGRVSGSGVLAFARYLLRKYGNVASVIEWEKTFKATCDTRLSSELDSCRSVDGELGLPLGVPAGVEDPDDFFRQKISGGRLPSRVGAGMREVVQHKVEEAFRFLFGKDRKLFAAGTLKGLPPVEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKIPDFSSGSNHSNITSASNLLNDARCILRMHITCLGLLKEALGERQSRVFDIALATEASTALAGVFTPSKASRSQFQTFPEVHDSSNTISNDMGSNSNKVVVAKTTKIAAAVSALFVGAIIYGVTSLERMVTVLRLKEGLDAVQFVRSTRSTSNGNARSVMAFKMDSSIEVHVHWFRLLVGNCRTICEGLVVELLGEPFIMALSRMQRMLPLNLVFPPAYSIFAFIRWRPFILNATVREDMNQIYQSLIVAITEAIKHLPFRDVCFRDCQGLYDLMSADNSDSDFANLLEFNGSDMHLKLTAFVPLRSRLFLNAIIDCKMPQSIYAKDDGSRISGPGESKVKPTDSGSKLQDMLVHILDTLQPAKFHWQWVLLRLLLNEQALIEKVENHDVPLADAIKLSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFAELIHLFGRSLEDSMLLQAKWFLGGQDVLFGRKAIRQRLHNIAVNKKLSVKTQFWEPWGWCSPTTDSLTIKGDNKKFDSTSLEEGEVVEEGTYLKRCQQQVIERALIELLLPCIDQSSDEARNSFATDLVKQLNYIETHITAITGGSKPVGSAPAGVEGQPNKVNNRKNLRTGSAALSRRPTVATDSSPPSPAALRVSMSLRLQLLLRFLPTLCTDREPSVRSTRQFLASVIFRLLGSRVVHQDADISANAVPLPTREAESSSEVASAAFVDSSSQSLFDRLLLVLHGLLSSYPPSWLRPKPSKTNNEPTIDRELLETLQNELDRMQLPDTVRWRIQAAMPVLIPSMRCSLSCQPPSVSNSALMCIQPGTANPGVNPSSSTIPQRGPALSRVASNVSGKPKRQDNDLEIDPWTLLEDGAGSIPLAGNTASLGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS