Information report for LR48_Vigan11g025500
Gene Details
|
|
Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;LHY1/CCA1-like protein, LATE ELONGATED HYPOCOTYL 1 gene b
Homologous
- Cicer arietinum: XP_004494880.1, XP_004494879.1, XP_004494878.1
- Glycine max: Glyma.07G048500.7.p, Glyma.07G048500.6.p, Glyma.07G048500.5.p, Glyma.07G048500.4.p, Glyma.07G048500.3.p, Glyma.07G048500.2.p, Glyma.07G048500.1.p, Glyma.07G048500, GmLHY1b, Glyma.16G017400.6.p, Glyma.16G017400.5.p, Glyma.16G017400.4.p, Glyma.16G017400.3.p, Glyma.16G017400.2.p, Glyma.16G017400.1.p, Glyma.16G017400, GmLHY1a, Glyma.19G260900.3.p, Glyma.07G048500.7.p
Gene Resources
- Pfam: PF00249
- UniProt: A0A0L9VQJ2
- RefSeq: XP_017442032.1 , XP_017442034.1 , XP_017442035.1 , XP_017442036.1 , XP_017442037.1 , XP_017442038.1 , XP_017442039.1
- EMBL: CM003381 , JABFOF010000009
- AlphaFoldDB: A0A0L9VQJ2
- KEGG: var:108347363
- OMA: VESAKCT
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF177
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A0L9VQJ2
- CDD: cd00167
- STRING: 3914.A0A0L9VQJ2
Sequences
CDS Sequence
- >LR48_Vigan11g025500
ATGGACGCGTACTCCTCTGGAGAAGAAGTAGTTGTAAAGACGAGAAAACCGTATACAATCACAAAGCAAAGGGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAGCTGCACGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCCGTGCAAATCAGGAGCCACGCACAGAAGTTTTTCACAAAGTTGGAGAAAGAAGCCCTTGTAAAGGGTGTTCCAATTGGACAAGCTCTTGATATAGATATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACCAGGATTGGTACCGCAACATTACATAGTGGAGCAAAGGATGGAAAGATCAATTTAGTCGAATTTTCACATGACAACCAAGCACTGGACTTGGAAAAAGAACCAGTTCCGGAGATTTATGATTTAGACGAGGGGCCAACAACAGTAAAGGAAAATAAGGATGAGAACTGTTCAAAAGTATTTACAGATATCCAGGAGGTACCATGTTCCTCTCTATCTTCAGCAAACAGGAGTTCAATATCTATGTCAGTGCCGCTGGGAAATTCATGCGTATTCAAGGAGACTACAACTTCAGTGAAAGAGGTAATAACTCCAGATGACAAAACTGAATCATTTCTGACTGTTGAACTTGAAAATGGGAATTTGGAGATCAATGGTGGAAAACAGGCAAATGGAACTAGTAAAAACTCCACGTTAGAGAATTCTGATGCTTTACTAATGAAATTGGTTCAAAATGAGAAAACAGATGGTCTCGATAGTGCATTAACAATAGAAGGAATGCAAGGCAATAATCAGAATTACCCTAGACATGTAACTGTGCACGTTGTTGACGGGAACCTTGGAACATGTACTCAAAATCCATCACAAGATATGCTGTTTCGTGACTGCATGTTTCAGCCAATAGGAGGGGCTAATGGGCAACCAAATCTTTTCACCAATTCAGCTCCATCGAACACAAGAGAAAGTCAAAATAACACAGCACGATCTTCTGCTCATCAATCATTTCTTCCGTATCCTCCCTTCACCCAACACAACCAGGACGATTACCAATCATTTCTTCACATGTCTTCCACATTTTCTAATCTTATTGTCTCTACCTTGCTGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTCGCTGCTACATTTTGGCCCTATGCAAATCCAGAGACTTCAGCAGATTCTCCTAGGTGCTCTCAAGGAGGTTTCACATCTAGACATATTGGTTCCCCTCCAAGCGTTGTAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCGTGGTGGGCAGCTCATGGACTGCTTCCTTTGTGTGCTCCTCTTCATACTGCTTTTGCTTGTCCTCCTGCATCTGTGACTGCAGTCCCATCAATGAATACTTCTGAAACACCATCTCTAAAGGCAGAACAAGAAAAGAGTACTCTACAAAATCCTCCTCTGCATGATCAGATGATGCATCCAGAATACTCGGAAGCTCCTCAAGCTCAACATTCAGCTTCAAAATCACTAGCTGTCATTTCATCAGATTCTGAGAGTGGAGATGTCAAGTTAAATACTTCACCAAAGGCTACCGATCATGAGACGAACGAAATAATTTCTGAGCACCTTGATTCCAACAAAACGAAAGGCAGAAAACAGGTTGACCGTTCCTCGTGTGGTTCCAACACAGCCTCAAGCAGCGATGTGGAAACTGATGCACTAGGGAAGGATGAGAAAGGGAAGGAAGAGCCTGAAACTCCCGATGCTAACCATTTAGCCATTGAGTTTAGTAATCGTCGTAGAAGCATTTGCAACCTTACCGATTCTTGGAAAGAGGTCTCTGAAGAGGGGAAACTAGCATTTCAGGCTTTGTTCTCCAGAGAGGTGTTACCTCAAAGCTTTTCACCTCCTCATGCTTTAACGAATAAGGACCAAATGGGCATCACCAATGATAACCAGCAAACCATAGATGACAGAAATGAAGACCTTGAAAGCAAGAAATGCAGTTCTATCTATAAACCAATGCAGAAAAATCCGCCATTTGTAGAAAATAATGTGGGACTGTTAACCTTAGGGCTTGGACAAGGAAAGCTTAAGACTCGTCGAACAGGCTTTAAACCCTACAAAAGATGTTCCATGGAGGCCAAGGAAAATAGGGTTGGAGCGAGCAATCAAGGTGAAGAGAAATGTTGTAAGAGAATACGTTTGGAAGGGGATACTTCGACTTGA
Protein Sequence
- >LR48_Vigan11g025500
MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTRIGTATLHSGAKDGKINLVEFSHDNQALDLEKEPVPEIYDLDEGPTTVKENKDENCSKVFTDIQEVPCSSLSSANRSSISMSVPLGNSCVFKETTTSVKEVITPDDKTESFLTVELENGNLEINGGKQANGTSKNSTLENSDALLMKLVQNEKTDGLDSALTIEGMQGNNQNYPRHVTVHVVDGNLGTCTQNPSQDMLFRDCMFQPIGGANGQPNLFTNSAPSNTRESQNNTARSSAHQSFLPYPPFTQHNQDDYQSFLHMSSTFSNLIVSTLLQNPAAHAAASFAATFWPYANPETSADSPRCSQGGFTSRHIGSPPSVVAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASVTAVPSMNTSETPSLKAEQEKSTLQNPPLHDQMMHPEYSEAPQAQHSASKSLAVISSDSESGDVKLNTSPKATDHETNEIISEHLDSNKTKGRKQVDRSSCGSNTASSSDVETDALGKDEKGKEEPETPDANHLAIEFSNRRRSICNLTDSWKEVSEEGKLAFQALFSREVLPQSFSPPHALTNKDQMGITNDNQQTIDDRNEDLESKKCSSIYKPMQKNPPFVENNVGLLTLGLGQGKLKTRRTGFKPYKRCSMEAKENRVGASNQGEEKCCKRIRLEGDTST