Information report for LR48_Vigan1091s001900
Gene Details
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Functional Annotation
- Encodes a poly(A) polymerase. Located in the nucleus.
Homologous
- Citrullus lanatus: Cla97C04G077650
- Cucumis sativus: CsGy1G006850
- Glycine max: Glyma.09G179500, Glyma.07G099400
- Gossypium hirsutum: Gohir.A09G176100, Gohir.D09G171800
- Juglans regia: Jr15_10090, Jr06_15070
- Manihot esculenta: MANES_01G015800, MANES_05G137200
- Medicago truncatula: Medtr8g106560, Medtr6g082000
- Populus trichocarpa: POPTR_015G043200v3
- Prunus persica: PRUPE_5G226600
- Rosa chinensis: RchiOBHm_Chr7g0179251
Gene Resources
- Pfam: PF01909 PF04928 PF04926
- UniProt: A0A0L9TIP1
- RefSeq: XP_017411310.1
- EMBL: KQ258629
- AlphaFoldDB: A0A0L9TIP1
- KEGG: var:108323380
- OMA: VAFVCQM
- InterPro: IPR007010 , IPR007012 , IPR011068 , IPR014492 , IPR043519 , IPR048840
- PANTHER: PTHR10682 , PTHR10682:SF41
- SUPFAM: SSF55003 , SSF81301 , SSF81631
- Gene3D: 1.10.1410.10 , 3.30.460.10 , 3.30.70.590
- OrthoDB: A0A0L9TIP1
- CDD: cd05402
- STRING: 3914.A0A0L9TIP1
Sequences
CDS Sequence
- >LR48_Vigan1091s001900
ATGGGAAGCCCTGGATTCGGCAATCAAAATAATGGGCAGCAGCAACGGTTAGGCATAACAGAGCCCATCTCATTGGGTGGACCCACTGAATATGATCTGATCAAGACACGTGAACTTGAGAAGCATTTGCAAGATGCTGGCTTGTATGAGAATCATCAGGAGGCAGTTAGTAGGGAAGAAGTACTTGGCAGGCTAGACCAGATTGTGAAAATTTGGGTCAAAACCGTAAGTCGTGCAAAGGGGCTAAATGAACAACTTGTGCAAGAGGCAAATGCCAATATTTTCACTTTTGGCTCGTATCGACTTGGGGTACATGGTCCTGGAGCAGATGTAGACGTTCTTTGTGTGGGGCCAAGATATGCATCAAGAGATGAAGATTTCTTTGGCGAGCTGCATAAGATGCTATCCGAGATGCCAGAAGTAACAGAGTTGCACCCTGTGCCTGATGCTCATGTACCAGTGATGGGGCTCAAGTTCAATGGCGTTTCAATAGATCTTCTTTATGCAAAATTATCTTTGTGGGTCATTCCTGAAAACTTAGATATATCACAGGAGTCAATATTACAAAATGCAGATGAGCAAACTGTCCGCAGTCTTAATGGTTGTAGAGTGACCGATCAAGTCTTGCGTTTGGTTCCAAATATTCAGAATTTTCGAACAACATTGAAGTGCATGAAGTTTTGGGCAAAGCATCGTGGTGTTTATTCGAATGTTACAGGTTTTCTTGGTGGTATAAACTGGGCGTTGCTTGTTGCACGAATATGCCAGTTATTTCCAAATGCACTGCCGAATATGTTAGTGTCTCGATTCTTCAGAGTATATACAAAGTGGCGTTGGCCAAATCCAGTAATGCTTTGTGGTATTGAAGAGGGATCACTTGGACTTCAAGTTTGGGATCCCAGAAGATATCCCAAAGATAGATCTCATCTAATGCCAATAATTACTCCTTCTTATCCTTGCATGAATTCTAGCTACAATGTGTCGTCAAGTACATTGCGTATTATGATGAAAGAATTTCAGAGGGGAAATGAAATATGTGAGGCTATGGAGGCTAAGAAGGCCGATTGGGACACTCTTTTTGAGCCTTTTCCCTTCTTTGAGGCTTATAAGAATTATTTGCAGATAGAGATATCAGCCGAGAGTGGTGACGATCTTAGAAAATGGAAAGGGTGGGTTGAGTCTCGCCTGCGCCAGTTGACATTGAAAGTGGAGAGGCACACCTATGGCATGCTTCAGTGTCATCCACATCCTGGTGAGTATCCTGACAAATCCAGACCTTTCCACTACTCCTACTTCACGGGACTGCAACGTATGCAAGGTGTTCCTGTCAGTGGTGCTGATGTTTCACAGTTTGATATAAGACTGAGTGTTGAAGAATTTAAGCATTCTGTCAACATGTACACTCTATGGAAACCTGGAATGGATATCCATGTCTTTCATGTGAAACGTCGTAGTATACCAACCTTCGTATTTCCTGGTGGCCTTCGACCTTCACACCCATCTAAACTAGCTTGGGAGAGTAAGCGGGGTTCAGAATTAAGTATTTCTGGCCATGCTCCACCACAACACTCTCAAGAAGGAGCCAACCATGGCAGGAAGAGAAAACTAGCTGAAGATAGTGCGCATAGCTTGAGAAATTCCAAGTCTCTTGCATCTTTGTCTCCCTCCACGAGGGAAGTTCATCCTGTTGTCATTGCTAGTTGTTGCTATGAGAAATGTAATGACTCGGAAATCATTAGTACCAGTGAAGAACAGAGTGAGAAACCTGATTTGGAATCTACAAGGAAATGTCACGGGGATTGGGATGCCAATGGATCGTCTACTTCACAAGATGCTGAAAAGCTAGCTATTGAGAAGATTATGTGTGGTCCAAATGATGCATACCGTGTCTTTTCAGAGGAATCCGATGAGCTTGAGTACAGAAATCAAGTCAAAGATTTTGGTGAGAATATGAAAAACAGCAGCAACTTAGACTCTTCAAACTCACAGGAACCAATTATTCCTCAGAAGGGCACTGCTTCTGCAACTTGTTTAAACTCAAACGGTGGTTCAGAAGACCTCGAGCCGGCGGAGCTGACGGTGCCATTATTTAGTGGGATCACTGCACCTGTGCCACAGCGGAAGCCCCTTATCAGGTTGAAGTTCACCTCCTTAGGAAAAGCTGCTGATTGA
Protein Sequence
- >LR48_Vigan1091s001900
MGSPGFGNQNNGQQQRLGITEPISLGGPTEYDLIKTRELEKHLQDAGLYENHQEAVSREEVLGRLDQIVKIWVKTVSRAKGLNEQLVQEANANIFTFGSYRLGVHGPGADVDVLCVGPRYASRDEDFFGELHKMLSEMPEVTELHPVPDAHVPVMGLKFNGVSIDLLYAKLSLWVIPENLDISQESILQNADEQTVRSLNGCRVTDQVLRLVPNIQNFRTTLKCMKFWAKHRGVYSNVTGFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTKWRWPNPVMLCGIEEGSLGLQVWDPRRYPKDRSHLMPIITPSYPCMNSSYNVSSSTLRIMMKEFQRGNEICEAMEAKKADWDTLFEPFPFFEAYKNYLQIEISAESGDDLRKWKGWVESRLRQLTLKVERHTYGMLQCHPHPGEYPDKSRPFHYSYFTGLQRMQGVPVSGADVSQFDIRLSVEEFKHSVNMYTLWKPGMDIHVFHVKRRSIPTFVFPGGLRPSHPSKLAWESKRGSELSISGHAPPQHSQEGANHGRKRKLAEDSAHSLRNSKSLASLSPSTREVHPVVIASCCYEKCNDSEIISTSEEQSEKPDLESTRKCHGDWDANGSSTSQDAEKLAIEKIMCGPNDAYRVFSEESDELEYRNQVKDFGENMKNSSNLDSSNSQEPIIPQKGTASATCLNSNGGSEDLEPAELTVPLFSGITAPVPQRKPLIRLKFTSLGKAAD