Information report for LR48_Vigan07g050400
Gene Details
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Functional Annotation
- Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
Homologous
- Actinidia chinensis: CEY00_Acc30448
- Beta vulgaris: BVRB_1g008490
- Citrullus lanatus: Cla97C02G050060
- Glycine max: Glyma.14G050200, Glyma.02G267300
- Gossypium hirsutum: Gohir.A08G079500, Gohir.D08G089100
- Juglans regia: Jr14_21470
- Manihot esculenta: MANES_15G105500
- Medicago truncatula: Medtr1g068830, Medtr5g085010
- Populus trichocarpa: POPTR_001G008800v3
- Prunus persica: PRUPE_1G537100
- Rosa chinensis: RchiOBHm_Chr5g0081511
- Vitis vinifera: VIT_06s0004g00950
Gene Resources
- Pfam: PF00097 PF02886 PF12678 PF13639 PF13920 PF13923 PF14447 PF14634 PF14835 PF15227 PF17121 PF18912
- UniProt: A0A0S3RK92
- EMBL: AP015036
- AlphaFoldDB: A0A0S3RK92
- InterPro: IPR001841 , IPR013083 , IPR013956 , IPR017907 , IPR018957
- PANTHER: PTHR23163 , PTHR23163:SF8
- SUPFAM: SSF57850 , SSF57997
- PROSITE: PS00518 , PS50089
- Gene3D: 3.30.40.10
- OrthoDB: A0A0S3RK92
- CDD: cd16499
Sequences
CDS Sequence
- >LR48_Vigan07g050400
ATGGAAAACTCAGACCACGACGAACCCGAGAAGAAGAGGCCTCATCTCACCTCTATTTCTTCTCGCACATCTAGAAACTCCATCAACTCTCCTACCACCAACAAAACTGCTGATGCAGGAGTCTTACAGTTTCAGAATCAGCAGCTTGTTCAACAGATTGACGTCCAGAAACATGCTTTGCATGGCCTTGAAGAAAAAATTAGAGAATTAAAAGGAAAGCAAAGTTCTTATGATGACTTGTTAATTGCTTTGAACCAACTCTGGACTCAGTTGGTTGACGATATGATTCTTCTTGGAATACAAGCTGGGAGAGGCAAAGGCAAAGACAAGTTGCGGTATTTGACTGACATTGAAAATCCTGAAGGTTCACTTCCTTTGTGTCCTGCTGAGGATATATTTCTATGTAGATTAATCCAGAAAGATTCCATTAAAGGAATCAGTGATGATGAGATCACTGGTTATGTTGATGAGGCCCTTGGTTTGCGTCAATCATCTACAATGGAGTTGTTGAAACTCCTAAAAGATATTATTGATGATCAGATGGAAAGATCAGGCGGTATAGCTCAGCTTTTGGACGGAGATATATCACCAGAAGATGCTATAACCCTAATGACTAAGATTGATGATATGATGAAAGAGGAGGCAAATAATTTGCAAGAAGTGATTGATACTCTCCATGCAAAGCATAAAGAGTATACTGTTGGTATTCAAAATTTTATCAATGAGTGCTTACAAGAAAAATCTGATATTAAACATCTAGCAGGTGAGCTTGATGAGATTGTGGCTGAACTTGAAGAGAGTAGAAGAAAACTAGTCAATTTGGAAATGCAAAAGGATACGTCAATAGGGATGAATTCTCCCAATGCAGATGCAGTAAATGGAAATCTGTCTCCTGAAAACATTGCAGACAGGACCATGGGTTTGCGTGAGTTGAAGGATTCAATTGAAGAAGCAAAGATTGTGGATGCTGATCGTATCTCTGAGCTCCAAGAGGCACAGGAAGACAATCAGACCTTGACAAAGCAATTCCAAGATCTTCAGAATGAACTGAAAGATGATAAGTACATACGCAGTTCACGAATATACTCTTTAGCTAATGATCAACTTCAACATTGGACATCTGAATTGGCGCGGTATAAAACATTGGTAGAATCTCTGCAGGCTGGCAGTGTTCATATTGCAAAATGGGAGAATGAACTAAATTTGAAATTGGAGTCTGCTGATTCTGCAAGGCAGCTCCTTGACAATTCTGATCATAGGATTGATGACCTAGAGCACCAGTTGCAGAAGTGTATTATTGAAAAGAATGATCTTGAAATTAAAATGGAAGAAGCTAAACAGGATTCTGGGAGAAAAGATATCAAATCTGAGTTTCGTGTCATGGCTTCAGCTTTATCTAAAGAAATGGGAATGATGGAAGCTCAATTAAAGCGATGGAAAGATGCAGCTCACGAGGCTGTATCATTACGGGAGAAAGCACATTCACTAAGAGAAGTATTGAACGTGAAGACAAGTGAACTAAAGAGCCTTGCAAACAAATGTGCTGAGCAGGTTTTGGAAATCAGGTCTTTAAAAATGCTGACTGAAAAGTTACAGAAAGAGAATCAGGAGTTAGAATTTGTTTTGGATATGTATGGCCAGGAGAATTATGATAAAAGTTATTCAGAGGTTAGAGAATCTGAAAGTAAGGCTCACTCTCAAGCTGAAATACTAAAAAATGCTTTGGATGAGCATAGCCTAGAGTTGAGAGTAAAAGCTGCTAATGAAGCTGAAGCTGCTTGTGAACAAAGGCTTTCTGCCGCTGAAGCTGAAATAGAGGACTTGAGGGCCAAGCTGGATACGTCTGAGAGGGGTATTTTGGAGCTAACTGAGGCTATTAAAGTTAAAGAAGCTGAGGCAGAGGCATATATATCTGAAATTGAGACTATTGGTCAAGCATATGAAGATATGCAGACACAGAACCAAAATCTGTTGGACCAGGTGATTGAGAGGGATGACTATAATATTAAGCTTGTATCAGATAGCGTGAAGACAAAACAGGCCTACAACACTCTATTGACCCAGAAACAGGCCTTAGCTAAACAACTTCAACAACTAAATACTTCAATAGAAAATTCAAAAGCGAGGATTGCACATAGTGAAGAACAGATGAAAACCATTCTATCTGAAGCCATTAAGTGTAATCAAGAAGAAAAACACCTTGCGGTCACCCTGGAATTTGCAAGGTGGGAATTGGCAGATGCCGAGAAGGAATTAAAGCTGCTCAAGTCTTCTGTTTCCTCTTCAGAGAAAGAGTACGATCAAATTCAGAAAGACACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGGAGTTCAAGGAAGAAGCTAGAGGAAGAATTAAGGGAATTGAACAGCCAAATTGCTGAGCTGACTTCTGAAACTGGAGAAACCACAATACAAAAACTTGAAAAAGAAATAAGGATATGCAAGAACATGATCAAGTGTACTGTCTGCACTGATCGTCCTAAGGAGGTTGTGATTGTCAAATGCTATCATTTGTTCTGCAATCCATGCATTCAGAGAAATCTAGAGCTTCGACACCGCAAATGTCCTGCATGTGGAACAGCATTTGGACAGAGTGATGTCCGTTTTGTAAAGATATGA
Protein Sequence
- >LR48_Vigan07g050400
MENSDHDEPEKKRPHLTSISSRTSRNSINSPTTNKTADAGVLQFQNQQLVQQIDVQKHALHGLEEKIRELKGKQSSYDDLLIALNQLWTQLVDDMILLGIQAGRGKGKDKLRYLTDIENPEGSLPLCPAEDIFLCRLIQKDSIKGISDDEITGYVDEALGLRQSSTMELLKLLKDIIDDQMERSGGIAQLLDGDISPEDAITLMTKIDDMMKEEANNLQEVIDTLHAKHKEYTVGIQNFINECLQEKSDIKHLAGELDEIVAELEESRRKLVNLEMQKDTSIGMNSPNADAVNGNLSPENIADRTMGLRELKDSIEEAKIVDADRISELQEAQEDNQTLTKQFQDLQNELKDDKYIRSSRIYSLANDQLQHWTSELARYKTLVESLQAGSVHIAKWENELNLKLESADSARQLLDNSDHRIDDLEHQLQKCIIEKNDLEIKMEEAKQDSGRKDIKSEFRVMASALSKEMGMMEAQLKRWKDAAHEAVSLREKAHSLREVLNVKTSELKSLANKCAEQVLEIRSLKMLTEKLQKENQELEFVLDMYGQENYDKSYSEVRESESKAHSQAEILKNALDEHSLELRVKAANEAEAACEQRLSAAEAEIEDLRAKLDTSERGILELTEAIKVKEAEAEAYISEIETIGQAYEDMQTQNQNLLDQVIERDDYNIKLVSDSVKTKQAYNTLLTQKQALAKQLQQLNTSIENSKARIAHSEEQMKTILSEAIKCNQEEKHLAVTLEFARWELADAEKELKLLKSSVSSSEKEYDQIQKDTEAIEMELESERSSRKKLEEELRELNSQIAELTSETGETTIQKLEKEIRICKNMIKCTVCTDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI