Information report for LR48_Vigan04g210900
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Citrullus lanatus: Cla97C08G156060
- Glycine max: Glyma.06G075500, Glyma.04G074300, Glyma.14G132500, Glyma.17G201000
- Gossypium hirsutum: Gohir.D13G185401, Gohir.A13G181900
- Juglans regia: Jr11_28260
- Medicago truncatula: Medtr3g108660, Medtr1g010040
- Prunus avium: Pav_sc0003562.1_g090.1.mk
- Prunus persica: PRUPE_1G462800
- Rosa chinensis: RchiOBHm_Chr6g0312261
- Vitis vinifera: VIT_04s0008g03170
Gene Resources
- Pfam: PF00443
- UniProt: A0A0L9UGR9
- EMBL: CM003374
- AlphaFoldDB: A0A0L9UGR9
- OMA: GSCEEMP
- InterPro: IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- CDD: cd01795 , cd02668
- STRING: 3914.A0A0L9UGR9
Sequences
CDS Sequence
- >LR48_Vigan04g210900
ATGAGTAGACCATCAACACGAGGTAAAAATAAAAGACACAGACAAGGGGATGATGGCAACGGGACTGTGGAAATATGGAGGAAAATTCACAATAGTGGTGTGGTAACTCATGATGATATGAATCAGTTATATATGATCTGGAAGCCAGTTTGTTCAGGATGTCGCGTCAATAGCAAAGACAACCCAAATTGCTTCTGTGCATTGGTTCCACCTCTAAATGGATCCCGGAAATCTGGCTTGTGGCAAAAGATGTCCGATTTTCTTGAAGGTCTTGGCCATGATCCGAATAAGGATCTACGGGCATCTGCTAATTCTCCTGCAGGTCTCACAAATCTTGGCGCAACATGCTATGCCAACAGTATACTTCAGTGTTTGTATATGAATCAATCTTTTCGAGAAGGCATCTTTTCTGTAGAACAAGATGTTTTACAACAACAGCCTGTGCTGGATCAGCTGACCCGACTTTTTGTGCAGTTGCATATTAGCAAAATGGCTTTTATAGATTCTTCTCCATTTGGTTGTCTTAGCCATTCCAAAGTGCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAAAGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAGATGGAAGATTTCTATGAACTGGAGTTGAATGTCAAAGGATTGAAAAGTTTAGATGAGAGCTTAGATGAATATCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGCGAGTCATGTAAAGGAAGAGTTGATGCTACTCGCAGCATCAAGCTGCGTACATTGCCCAAAATACTTAATTTTCAACTTAAACGTTACATCTTCCTTCCTAAGACTACAACAAAGAAGAAAGTTAATTCTGCTTTCTCATTTCCTGCTGAACTTGATATGCGGCATAGAATGTCGGAGTTGTCTGAGTTTGATTTGGTGTATGATCTGTCAGCTGTATTGATTCACAAGGGAACTGGTGCTAATAGTGGCCATTACATTGCACATATTAAGGATGTAAACACTGGGCAATGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTTGTCATCCATTTGGTGAAGGGTCTTCAAATTCTACCTCTAAATCCATCAAGAATGAGGCAATTCATTCTGGAAGTTCTCAAGGGATGATAGCTGACAGTAATGGAAATGGTTTGAATGTCTCTCATTTGCAATCTTCACGTGTGGAGACATTTTTGTCTACTGATGCGTACATGTTGATGTACCATCTTAAACATACGAAAAATGTAGGTGAAAGTGGGAGTGTAATTTGTGGAGCTAGGCATAATGAAAGAGAGGGTGTTGAAGTTGCTATGCAAAATGGCACTTCTCTTCCATTTCATATTTATGATGAGATTCAAAATTTTAATGCGTCATATGATGAGGTTTGTCAGCAGTACAGCAAGATGAAAGAGTTCGAATTGGGTCGTATTACTGGGAGGAGACAGGAGGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCTTTGGAGCAACCATTTTACTGGATTTCTAGTGAATGGCTTCGCCAGTGGGCTGACAACATTGTTCCAAACCCTCTTGACAACTCGCCTGTTCAATGTTCACATGGGAAAGTCCCAGTTTCAAAGGTTACCTCAATGAAGCGGTTGTCTGCCAAAGCATGGGATATGTTGAACTGCATACTCTGCTGGACAGATGTAAATAATGATGATTTTTCATTTGATGGTTTATATGTGTATCTCTTCCATATTCTTGTTCCTATTGCTGCTTCCGCTCTCACCATTTGCGGTAATAATAATATAGATGATGTGTTCCCTTTATTGACTTTTAAAATTCAGTATGGTGGGGGCCCCACATTATCTCATGATGAGCACTGTTTGGATTGCCTGATTCATGGGGCTAAGACCGTGGTTTCAGCTGACTCCTACCGGGATAGAAGAGATTCAATGAAATCACTTGCACGGGATATTCTAGATGGAAACTGCCCGGATGGAAAGTTTTACATTTCCAGACAATGGTTGCAACAATGGTGGAAAAGGAAAGTTCTTGATGCTCCATCTGAAGCTGATGCTGGGCCAACAGCAGCCATTAGTTGTCCACATGATCAACTGCTGCCTGAGCAAGCTCCTGGTGCTAAGCGTGTGCTTATTCCTGAGAGTTTTTGGCTCTTCTTATATGAAGATGCGGTGTCTGTGAAGCCTGGTGATCCTTTGGGTGGCCCAACATTTTCTTCAGATTCTGAACAGTGTTCCCTGTGCAGTAATGAATTATCAGAAGTAGCATGCTTTGAGGACTCCTTGAGATTAGTTAAACAAAAGCAACGTCAGAATCATGAGAAATTGTTCCAGGCTAAAAGTCTGCCACTTTCTCTAAACTGCAAGTATTTCTTGGTGCCTTCATCTTGGATTTCAAATTGGAGAAATTACATCAATCCAACCCTGAAGAATTCAGATAAACCTGAAACTTTAGATGGGGCAATTGATTCATTGTTATGTGAAAAGCACTCACAGCTTCTTGAAAGACCTCCTGAATTGGTTTTCAGACGCGGTGCCATTATCCAGAAGGAGTCTTCTGTAGGTGGCTTAACCATTGTATCTGAGAATGATTGGAAACGCTTCTGTGAAGAATGGGGTGGTATTGAGACTAAAGGAATATCTGCAACTATTGATCATACTAGTAATCCAGGCAATGTTTTGGCTGGATCCAGTGAAGAAATGCTGACATGCAAGGATCAGTTGGGCACAGCAGATAAAATGAATTATGAAAATGGAACTGGACTAGTCTTCATCAAGACTTGTCCTGAGGTTTGTGAAAATTGCATTGGAGAAAGAGAGAGCTGTGAGCTGATGCAGAAGCTTAATTATTCCAACGAGGACATATGTGTTATTCTTGTCCGTGGTAAGGAGGTACCAAGATCAATGTTAGAAGCTTCAAAGGGGTCTGTTGAAACAGATCGTCGAGTTTCCAAGCGTTCCCGTAAGACTAAAAACGGGAGTTCAATTAGTCTAAAAGTTTCTGCTTCAACAACTTTATATCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTTAAGGAAAACCAAATACTGCATAAAGGTGATAGGATAATTGATAGTGATAATGAAGGTGCTACCCTCGTGGATGTGAACATATTTGCTGGAGATCAGCTTATAGTGAGAGACTCTGAGATCCACGAAAATCGAGATATTGCTGATGAGCTTTGCGATGATAAAAAGGATCTGCAGCATACCGAGGAAGGGTTCCGTGGAACACTTCTTACAGCAAATGTTTCATCTCAGGTTGTTTAA
Protein Sequence
- >LR48_Vigan04g210900
MSRPSTRGKNKRHRQGDDGNGTVEIWRKIHNSGVVTHDDMNQLYMIWKPVCSGCRVNSKDNPNCFCALVPPLNGSRKSGLWQKMSDFLEGLGHDPNKDLRASANSPAGLTNLGATCYANSILQCLYMNQSFREGIFSVEQDVLQQQPVLDQLTRLFVQLHISKMAFIDSSPFGCLSHSKVPKARTIVQDLFRGSVSHVTKCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDEYLTVEELNGDNQYFCESCKGRVDATRSIKLRTLPKILNFQLKRYIFLPKTTTKKKVNSAFSFPAELDMRHRMSELSEFDLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGCHPFGEGSSNSTSKSIKNEAIHSGSSQGMIADSNGNGLNVSHLQSSRVETFLSTDAYMLMYHLKHTKNVGESGSVICGARHNEREGVEVAMQNGTSLPFHIYDEIQNFNASYDEVCQQYSKMKEFELGRITGRRQEVRSVLAEAPVQPLEQPFYWISSEWLRQWADNIVPNPLDNSPVQCSHGKVPVSKVTSMKRLSAKAWDMLNCILCWTDVNNDDFSFDGLYVYLFHILVPIAASALTICGNNNIDDVFPLLTFKIQYGGGPTLSHDEHCLDCLIHGAKTVVSADSYRDRRDSMKSLARDILDGNCPDGKFYISRQWLQQWWKRKVLDAPSEADAGPTAAISCPHDQLLPEQAPGAKRVLIPESFWLFLYEDAVSVKPGDPLGGPTFSSDSEQCSLCSNELSEVACFEDSLRLVKQKQRQNHEKLFQAKSLPLSLNCKYFLVPSSWISNWRNYINPTLKNSDKPETLDGAIDSLLCEKHSQLLERPPELVFRRGAIIQKESSVGGLTIVSENDWKRFCEEWGGIETKGISATIDHTSNPGNVLAGSSEEMLTCKDQLGTADKMNYENGTGLVFIKTCPEVCENCIGERESCELMQKLNYSNEDICVILVRGKEVPRSMLEASKGSVETDRRVSKRSRKTKNGSSISLKVSASTTLYQLKMMIWESFGVVKENQILHKGDRIIDSDNEGATLVDVNIFAGDQLIVRDSEIHENRDIADELCDDKKDLQHTEEGFRGTLLTANVSSQVV