Information report for LR48_Vigan04g206100
Gene Details
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Functional Annotation
- Encodes a nuclear poly(A) polymerase. Located in the nucleus.
Homologous
- Actinidia chinensis: CEY00_Acc22607
- Citrullus lanatus: Cla97C08G155220
- Glycine max: Glyma.06G088500, Glyma.04G086800
- Gossypium hirsutum: Gohir.D07G024800, Gohir.A07G022233
- Juglans regia: Jr11_26550, Jr08_03820
- Manihot esculenta: MANES_11G032900
- Medicago truncatula: Medtr3g110375
- Populus trichocarpa: POPTR_006G235400v3, POPTR_018G057200v3
- Prunus persica: PRUPE_1G444600
- Rosa chinensis: RchiOBHm_Chr6g0306691
Gene Resources
- Pfam: PF01909 PF04928 PF04926
- UniProt: A0A0L9UGI3
- EMBL: CM003374
- AlphaFoldDB: A0A0L9UGI3
- OMA: HYFFFEA
- InterPro: IPR007010 , IPR007012 , IPR011068 , IPR043519 , IPR048840
- PANTHER: PTHR10682 , PTHR10682:SF36
- SUPFAM: SSF55003 , SSF81301 , SSF81631
- Gene3D: 1.10.1410.10 , 3.30.460.10 , 3.30.70.590
- CDD: cd05402
- STRING: 3914.A0A0L9UGI3
Sequences
CDS Sequence
- >LR48_Vigan04g206100
ATGGCGGTTTCCGATAGTCCAAGCGGTGCCTCCACGCCGCCTCAACAGGAACAAGCCAACAAGTACGGTTTCACGAAGCCTCTATCTCTCGCGGGTCCCACCGACGCTGATCTCCACCGTAACAACGAATTGGAGAGGTTCTTGCTCGATTCGGGGCTTTACGAGAGCAATGATGAGTCCGCCGCGAGGAAGGAGGTTCTTCACCGCCTCGATCAGATTGTGAAGAGCTGGGTGAAGCAGTTGACGCGCCAACGTGGCTACACAGATCAGATGGTTGAGGATGCAAACGCAGTCATTTTCACTTTTGGTTCTTACCGACTAGGGGTTCATGGACCTGGAGTTGACATTGACACTTTGTGCATTGGTCCTTCTTATGTGAACCGAGAGGAAGATTTCTTCATCATTTTGCATAACATTCTGGCTGAAATGGAAGAAGTTTCTGAACTTCAACCAGTTCCTGATGCACATGTTCCTGTAATGAAATTCAAATTCCAGGGAATATCTATAGATTTGCTGTATGCAAGTATATCACTTTTGGTTGTGCCAGAAGACCTGGATATCTCTCATGGTTCAGTGCTGTATGATGTTGATGAACCAACTGTTCGAAGTCTTAATGGCTGCCGTGTGGCAGATCAAATTCTTAAACTTGTTCCAAATATTGAGGTTACTGGATTCCTTGGTGGTGTAAATTGGGCTATTTTAGTTGCTCGAATATGCCAGCTTTACCCTAATGCAATCCCTAGTATGTTGGTTTCCCGGTTCTTCAGGGTCTATACACAGTGGCGATGGCCAAACCCTGTAATGCTATGCTCTATTGAAGAGAATGAACTGGGATTCCCTATATGGGATCCTCGTAGAAATCCCCGAGATAGATTTCACACTATGCCAATAATTACTCCTGCATACCCTTGCATGAATTCAAGTTACAATGTCTCAGCAAGTACTCTTCGTGTCATGATGGAACAGTTCCGCTATGGCAATAAGATTTGTGATGAAATTGACCTCAATAAAGCCCAGTGGAGCGCACTTTTTCAGCCTTATATCTTTTTTGAGGCATACAAAAACTATTTACAAGTGGACATAGTTGCATCGGACACTGATGATTTACTAGCATGGAAGGGCTGGGTAGAATCTCGATTGAGGCTGCTTACCCTTAAGATAGAGCGAGATACAAATGGTATGCTGCAGTGCCATCCTTATCCACATGAGTATATAGACACATCGAAGCCATGTGCTCATTCTGCATTTTTCATGGGCTTGCAAAGGAAAGAGGGAGTAAGAGGTCAAGAAGGACAGCAATTTGATATACGTGGAACGGTTGATGAATTTAGACAAGAAATAAATATGTATATCTACTGGAAGCCTGGAATGGAAATTTTTGTTTCTCATGTTCGTCGAAAGCAACTTCCTGCATTTGTTTTTCCTGATGGTTACAAACGCACTAGAATGCCAAGACACATAAGCCATCCGACCGAAAAAACAGGTGATGATGCCACGAAGTGCTACTCTGGATCTGGGCCATCTGAAAGATGCACCAAGAGGAAAAGTTACCCTGAAATGGTGGAAAAGAAGCCAGACAAACCAGATAAACGGGCATCTATTAGCCCACAGAGGTTAGAAAGTGTTTCTCCTGAAAGTTGTACTAGTAAATCAGGTGGTACAGCTCAAATGAGTATTGATAGTATGGAAGGGGTTTGGGTAGCTGGTTCAACAACCAATTATGCTAACAGCAATTGTGAAATTAAGTCATCTGATGTGCTCCCAGGAAGTGGACTAAGCTCTGTCGTAGCTGACATGCAGATAAGTGAACCGGGCTTTGTTGACACCACACATGATATGTTGAAACCGAGGTGTGTAGAAGTTCCTAATGAGAATGGAGTTGTCGATGGGGACAAAGCTCAGGATCTGGCTTTAGATTGCTTGGAAAGTGAAGAAACCGAATCTACTAACAATTTTTCGAACTGTAAAGCGGGTGTCGTCGATATGGATCAGCAACTAGACAAAGCATGTAATTTCATCACAAGGGATGAATGCTCAGATTATGTACCAAATGCCAGCTCCCAGAACCTCAGTTGCGAGGTCCTGCACCACTATACGTGCTATGTTTCCAGTAACTGTGCTTAA
Protein Sequence
- >LR48_Vigan04g206100
MAVSDSPSGASTPPQQEQANKYGFTKPLSLAGPTDADLHRNNELERFLLDSGLYESNDESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNIEVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIDLNKAQWSALFQPYIFFEAYKNYLQVDIVASDTDDLLAWKGWVESRLRLLTLKIERDTNGMLQCHPYPHEYIDTSKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYIYWKPGMEIFVSHVRRKQLPAFVFPDGYKRTRMPRHISHPTEKTGDDATKCYSGSGPSERCTKRKSYPEMVEKKPDKPDKRASISPQRLESVSPESCTSKSGGTAQMSIDSMEGVWVAGSTTNYANSNCEIKSSDVLPGSGLSSVVADMQISEPGFVDTTHDMLKPRCVEVPNENGVVDGDKAQDLALDCLESEETESTNNFSNCKAGVVDMDQQLDKACNFITRDECSDYVPNASSQNLSCEVLHHYTCYVSSNCA