Information report for LR48_Vigan03g008900
Gene Details
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Functional Annotation
- Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.;Encodes a trithorax group chromatin‐remodelling factor, an homologue of Arabidopsis Trithorax protein1 (ATX1)
Homologous
- Actinidia chinensis: CEY00_Acc08874, CEY00_Acc00215
- Glycine max: Glyma.08G258500, Glyma.18G282700
- Gossypium hirsutum: Gohir.A10G136500
- Juglans regia: Jr07_16030, Jr07_16040
- Manihot esculenta: MANES_04G059300
- Medicago truncatula: Medtr7g021365
- Populus trichocarpa: POPTR_014G146300v3, POPTR_002G232800v3
- Prunus avium: Pav_sc0000017.1_g1380.1.mk
- Prunus persica: PRUPE_1G177800
- Rosa chinensis: RchiOBHm_Chr4g0409981
- Vitis vinifera: VIT_05s0124g00250
Gene Resources
- Pfam: PF05965 PF05964 PF00855 PF00856 PF00628
- UniProt: A0A0S3RR99
- EMBL: AP015037
- AlphaFoldDB: A0A0S3RR99
- InterPro: IPR000313 , IPR001214 , IPR001965 , IPR002219 , IPR003616 , IPR003888 , IPR003889 , IPR011011 , IPR013083 , IPR019786 , IPR019787 , IPR034732 , IPR041956 , IPR042010 , IPR046341 , IPR047365 , IPR050701
- PANTHER: PTHR13793 , PTHR13793:SF140
- SUPFAM: SSF57903 , SSF63748 , SSF82199
- PROSITE: PS01359 , PS50016 , PS50081 , PS50280 , PS50812 , PS50868 , PS51542 , PS51543 , PS51805
- Gene3D: 2.170.270.10 , 2.30.30.140 , 3.30.160.360 , 3.30.40.10
- OrthoDB: A0A0S3RR99
- CDD: cd10518 , cd15494 , cd15662 , cd20142 , cd20404
Sequences
CDS Sequence
- >LR48_Vigan03g008900
ATGGCAGCGGCGTTCCAGGAAGGAGGAGGTGCCGACGACGATGCCACCATCGACGTCCACACAACGCGTGGCACGCCCATCCGCTACCTTCCCCTCGACCACCTCTACTCTGCCACGTCGCCCTGCCGCGTCACGGCCAGCGGCTCCTCCAACGTCATGTCCAAGAAGGTCAAGGCTCGAAAACTCACTACTCTCGCCGCGCATCATCATTTCACAAACCACGACCACAAGAAAACCATGTCGTCCTCATCCTCCTCCTCCCACCCTCCTTCTTCCAAGCCTCCCTTGCTCTTCGTCTACTCGCGCCGCCGCAAGAGGCATTCCCCTTCCACGGCGCTGTGCAAAACCGAGGGCAAGGTGAATGCGGACGAGAATGAGGATGAGACAAGGTTGTTGAAGAAGAGGAAAATTGGGAGCACTGAGTTGGAGAGGTTGGGTGTGGATTTGAACACTGCGATTGGGGATGCTGACGGACCTCGATTGAGGGAATGCCGAAACCAATTTGGGAATTCTGGTGCTGCTGGGAATGTTAAGTGTGGTTCCTTGGAGAATTTGCCGAAAATTTCGCCCGATTCTCGCCCTGTGAAAAAATGGGTCGGGTTGAGTTTTGATAATGCTGATCCCGAGGTGTTTGTTGGATTAAGATGCAAGGTTTTTTGGCCCATGGATTTGAAAGCGTACACTGGCTATGTCAGAGGTTATGACAAGGAAACTAAGATACATCATGTCAAGTATGATGATGGAGACGAGGAAAATTTGATTCTTTCAAATGAAAATATTAGATTCCATGTTTCCCGTGATGAGGTGAAACATTTAAAATTGAATCTTGCCAAAGTTCGTGACAACAATGTCTCTGATTATGATGTTGAAGAGATGCTTGCAATGGCTGCAAGTTTGGATGATTGTCAAGACTTTGAGCCTGGGGATATCATATGGGCTAAGCTAACAGGCCATGCAATGTGGCCAGCTGTTGTTTTGGAGGAATCACTTGCTAGCAACTGTAAAGGTTTAAAGACGAGTTTGGGAGGAAGATCAGTTCCTGTCCAATTTTTTGGCACCCATGACTTTGCAAGGGTTAGACTGCAACAGGTGAAATCATTTCTCAGTGGACTTCTTACCGATCTACACTCAAAATGCAAGAAACATAGTTTTATTGAAGGTTTAGAAGAGGCAAAAAGATATTTAAGTGAACAGAAGCTTCCTTTGGAAATGCTAGAGTTGCAGAAAAGATGTGCAGCAGATAATTGTAACAATGTAAGTAGAGAGGAAGGAGGATGTACAGATTCAGGCGATGATTGTTTACAAGGCGAGAGGACTTTATTGGCTAAGGAAACTGTTGAAAATTTTCCTTACGAATTAGGAGACCTCCAAATTCTAAGCCTTGGAAAAATAGTTGAAGATTCTGCATTCAGAGATGGAAGGTTTATCTGGCCTGAAGGGTACACAGCAGTGAGGAAGTTTGCTTCAGTTACTGGCCCAGAAGTTTTTGCTTCTTATAAGATGGAGGTGTTGAGAGATCCAGAGTCCAAAGTTCGTCCTCTATTTAGAGTGACAGTTGATGGCGGCGAGCAGTTCAACGGTAATACTCCATCTGTTTGTTGGAACGAGATATTCAAAAAGATAAAAGAAATGGAAAAGAATGCTTCTGAAGGCAGTCTTGCTGAAGGTGGGGTAGAAAGGGGCTACGCATCTGGGTCTGATATGTTTGGTTTCTCCAATCCTAAGGTGCTTAAACTTATACAGGGATTGTCTAAATCCAAAATCTCTTCAAGGAATTCATCTGGCAAGTTAGGTTCCCAAAGACATAATAACTTGCCTCTTGGTTATAGACAAGTTCATATTAACTGGTTTGACCTCGATAAGTGCAACGTGTGCCACATGGATGAGGAGTATGAGAACAACCTGTTTCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCTAGATGTTATGGAGAACTAGAACCTGTTAATGGGGTGCTATGGTTATGCAACTTATGTCGTTCAGGAGCTCCGCCTCCACCTTGCTGCTTATGTCCACTCATAGGTGGTGCAATGAAGCCTACTACAGATGGCCGGTGGGCTCATTTGGCTTGTGCCATGTGGATACCTGAAACTTGTTTAGCTGATGTCAAGAGAATGGAGCCTATTGATGGTTTGAGTAGAATCAGTAAGGACCGCTGGAAGTTGCTATGCAGCATATGTGGTGTATCTTATGGTGCCTGCATCCAATGTTCAAATAGTTCTTGTCGAGTAGCATATCACCCACTCTGTGCACGTGCTGCTGGTCTCTGTGTTGAGCTTGAAAATGAGGATAGGCTCTATCTGCTTTCTGTTGACGATGATGAAGATCAGTGCATACGCTTACTCTCTTTCTGCAAGAAACATAGGCAACCGTCCAATGAACATTCTGTTGCTGATGATCGTATAGTTCGAGTATCTGGTCTATGTTCAGACTATGAACCACCGCCCAATCCATCTGGTTGTGCTCGAAGTGAACCATATGATTACTTTGGCAGGAGAGGTCGAAAGGAACCTGAAGCACTTGCAGCTGCATCATTGAAACGGTTGTTCGTGGAGAATCAGCCTTACTTAGTAGGTGGATACTGCCAGCATGGATCATTAAATGACCCAGAGCCTTCTGGCAGAGGAGTCTGCTCCAAATTTTTTTGTAGCCAACAAAGGCTAAGAACATCTCTGATGGACACATCTAACAACATACTTTCTATCTCTGAAAAATATGAGTACATGAGGGAAACCTTTCGGAAGCGGCTTGCATTTGGGAAATCAAGAATTCATGGATTTGGCATCTTTGCAAAGCATCCACATAAAGGTGGAGACATGGTGATTGAATACACTGGTGAACTTGTTAGACCACCAATAGCTGACCGGAGAGAACACTTTATATACAATTCATTGGTCGGTGCTGGAACATATATGTTTCGGATTGACGATGAACGAGTCATTGATGCTACTAGAGCAGGAAGCATTGCTCATTTAATAAACCATTCTTGTGCACCAAATTGCTATTCAAGAGTAATAAGTGTTAATGGCGACGAGCATATTATAATATTTGCAAAGAGGGACATAAAACAGTGGGAAGAGCTTACATATGATTATAGATTTTTCTCAATTGATGAACGGCTTGCTTGTTATTGTGGCTTCCCAAAGTGCCGAGGTATAGTAAACGATACGGAAGCAGAAGAGCGAGCTGCTACCCTTTATGCACCACGAAGGGAATTGATAGATTGGAGAGGAGAATGA
Protein Sequence
- >LR48_Vigan03g008900
MAAAFQEGGGADDDATIDVHTTRGTPIRYLPLDHLYSATSPCRVTASGSSNVMSKKVKARKLTTLAAHHHFTNHDHKKTMSSSSSSSHPPSSKPPLLFVYSRRRKRHSPSTALCKTEGKVNADENEDETRLLKKRKIGSTELERLGVDLNTAIGDADGPRLRECRNQFGNSGAAGNVKCGSLENLPKISPDSRPVKKWVGLSFDNADPEVFVGLRCKVFWPMDLKAYTGYVRGYDKETKIHHVKYDDGDEENLILSNENIRFHVSRDEVKHLKLNLAKVRDNNVSDYDVEEMLAMAASLDDCQDFEPGDIIWAKLTGHAMWPAVVLEESLASNCKGLKTSLGGRSVPVQFFGTHDFARVRLQQVKSFLSGLLTDLHSKCKKHSFIEGLEEAKRYLSEQKLPLEMLELQKRCAADNCNNVSREEGGCTDSGDDCLQGERTLLAKETVENFPYELGDLQILSLGKIVEDSAFRDGRFIWPEGYTAVRKFASVTGPEVFASYKMEVLRDPESKVRPLFRVTVDGGEQFNGNTPSVCWNEIFKKIKEMEKNASEGSLAEGGVERGYASGSDMFGFSNPKVLKLIQGLSKSKISSRNSSGKLGSQRHNNLPLGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGLSRISKDRWKLLCSICGVSYGACIQCSNSSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKKHRQPSNEHSVADDRIVRVSGLCSDYEPPPNPSGCARSEPYDYFGRRGRKEPEALAAASLKRLFVENQPYLVGGYCQHGSLNDPEPSGRGVCSKFFCSQQRLRTSLMDTSNNILSISEKYEYMRETFRKRLAFGKSRIHGFGIFAKHPHKGGDMVIEYTGELVRPPIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLACYCGFPKCRGIVNDTEAEERAATLYAPRRELIDWRGE