Information report for LR48_Vigan01g003400
Gene Details
|
|
Functional Annotation
- Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.
Homologous
- Cajanus cajan: C.cajan_26850
- Cicer arietinum: XP_004503803.1
- Glycine max: Glyma.05G200800.4.p, Glyma.05G200800.1.p, Glyma.05G200800, Glyma.08G008100.1.p, Glyma.08G008100, Glyma.05G200800.3.p, Glyma.05G200800.2.p, Glyma.05G200800.5.p, Glyma.06G164900.1.p, Glyma.06G164900, Glyma.04G200600.1.p
- Medicago truncatula: Medtr8g100050.1, Medtr8g100050
Gene Resources
- Pfam: PF02309 PF06507 PF02362
- UniProt: A0A0L9TIW1
- EMBL: CM003371
- AlphaFoldDB: A0A0L9TIW1
- OMA: DANPNRW
- InterPro: IPR003340 , IPR010525 , IPR015300 , IPR033389 , IPR044835 , IPR053793
- PANTHER: PTHR31384 , PTHR31384:SF79
- SUPFAM: SSF101936 , SSF54277
- PROSITE: PS50863 , PS51745
- Gene3D: 2.30.30.1040 , 2.40.330.10 , 3.10.20.90
- CDD: cd10017
- STRING: 3914.A0A0L9TIW1
Sequences
CDS Sequence
- >LR48_Vigan01g003400
ATGCACCCTCGTTGCAAATGCATATCGCTGCCCGTTCACAGCAAGACAACGCCATTTCCCAATAAAAACAGTGCAACTTTCCCGCCACCGTCAAGACAAACGGCGTTACATGCCTCGTCCAATAACTCATCCGCGTCTGTTAACGCCGCTAGAACATACGTCTTTCACTGTCCCAGGAGCCGTCAAGGAGATCGCGCTGCCTTGCCAGGGAAAACAATCCCACCTGGTGTAGCCGGTTCCCAACGGGGCTCAACCGGTAAAAGCCGATTCTGCAACAGTGAAGAGAAGCGGAGGCTCCGATCTTGCCATGTGGTGTGCGAGAGATCTGTGAGGAGCTTCAACGGAAAAAAAATGGCGTCGTCGGAGGTATCGATCAAGGGAAATTCGGTGAACGGTAAAGCAGAGAACAGTTCCGGTGGCTTCAACGGCTGCAACGATGTTAGGAACGCTGGAGGAGAGCTTCAGAATGCTTCTTCCTCATCATCCGCCAGAGACGCGGAAACAGCGCTTTACAGGGAGCTATGGCACGCGTGCGCGGGTCCGCTGGTGACGGTGCCTAGAGAAGGAGAGCGCGTGTTCTACTTTCCTCAAGGACATATTGAGCAGGTGGAAGCGTCGACAAATCAGGTAGCGGAACAGCATATGCCGGTTTACGATCTACCACCGAAGATCCTTTGTCGGGTCATCAACGTCATGCTCAAGGCGGAGCCAGACACAGACGAGGTGTTTGCCCAAGTAACCTTACTTCCTGAGCCAAATCAAGACGAGAATGCGGTGGAGAAGGAGGGTCCTCCGGCACCGCCTCCCCGGTTTCACGTCCATTCGTTTTGTAAGACACTTACGGCTTCTGATACGAGTACGCACGGTGGATTTTCGGTGTTGAGACGACATGCTGATGAATGCCTTCCCCCGCTGGACATGTCAAAGCAGCCACCTACCCAGGAGTTGGTGGCCAAGGATCTGCACGGGAACGAGTGGCGATTCAGGCATATTTTTCGGGGTCAACCGCGTAGACACTTGCTGCAAAGTGGTTGGAGTGTTTTTGTCAGCTCCAAGAGGCTGGTTGCTGGGGATGCGTTTATATTTTTAAGGGGTGAGAATGGGGAACTTCGAGTTGGTGTTAGGCGTGCAATGAGGCAGCAGGGTAACGTTCCCTCCTCGGTTATCTCGAGCCACAGTATGCATCTTGGTGTTCTTGCAACTGCTTGGCATGCCATATTGACTGGAACCATGTTTACCGTGTATTACAAACCTAGGACTAGTCCAGCCGAATTTATAGTTCCGTATGATCAATACATGGAGTCACTAAAAAACAATTACACCATCGGGATGCGCTTCAAAATGAGGTTTGAAGGTGAAGAGGCTCCCGAGCAAAGGTTTACCGGTACCATTGTGGGAATAGAAGATGCTGATCAAAAAAGGTGGCCTAACTCCAAATGGAGAAGCCTTAAGGTGAGGTGGGATGAAACTTCTAACGTACCTCGTCCTGAGAGAGTTTCCCAATGGAAAATAGAGCCCGCTCTCGCTCCTCCTGCTCTTAACCCTTTACCAATGCCCAGGCCTAAAAGGCCTCGATCTAATGTGGTTCCATCATCCCCTGATTCCTCTGTTCTTACCCGTGAAGCATCATCTAAAGTGAGTGTGGACCCTTTGCCAGCAAGTGGATTCCAAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGTAAATTTTGCCGAAAGCAATGAATCTGATACGGCAGAGAAGTCTGCATGGTCATCTGCTGCAGACGATGAAAAGATTGATGTTGTTTCCACCTCTAGAAGGTATGGATCAGAGAGCTGGATGTCAATGGGAAGGCACGAACCAACTTATCCAGATCTGCTTTCTGGCTTTGGGGTTCATGGAGATCAGGCTTCCCATCCATCGTTGGTTGATCAAAATGGTCCTGTAGCTAACCTTAGTAGAAAACATTTTTTCGACCGCGAAGGCAAACATAATGTTCTTAGTCCTTGGCCTGTAGTGCCATCTAGTCTATCACTCAATCTATTGGACTCTAATACAAAAGTCTCTGCTCAAGGTGGTGATCAAGTTCGAGGGAATTTGAGATTTAGCAGTGCATTTGGTGACTATACTGTGCTTCATGGACACAAAGTTGATCATTCGCACGGAAACTTTTTGATGCCACCACCACTGTCAACTCAATATGAGAGCCCTCGTTCTAGAGAACTGTTACCCAAACCAATATCAGGAAAACCTTCTGAGGTATCAAAACCGAAGGACAGTGACTGTAAGCTATTTGGCATCTCACTTCTTAGTAGCCCCATTGCTCTGGACCCTTCTGTATTACAAAGAAATGTTGCAATCGAGCCAGTTGGTCACATGCATACCACACATCAACAGCGCACATATGAAAATGACCCAAAGTCTGAGAATTCAAGGGGATCGAAACCGGCTGATGGTGTGCTGATTGACGACCATGAAAAGCCTGCACAAACTTCTCAGCCACAGCTGAAAGATGTTCAACCCAAATCTAATGGTGGTTCTGCTAGAAGTTGCACTAAAGTTCACAAGAAAGGGATTGCACTTGGTAGGTCGGTGGACCTCACAAAATTCAGTGCATATGATGAATTAATTGCTGAATTGGATGAGCTATTTGAATTCGGAGGTGAATTAACCTCTCCCCAAAAAGATTGGCTTATTGTCTACACTGATAATGAGGGCGATATGATGCTTGTTGGTGATGATCCTTGGCAGGAATTTGTTGCTATGGTACGAAAAATTTATATCTATCCCAAAGAGGAGATTCAGAAAATGAGCCCGGGTACCTTAAGTTCAAGGAACGAAGAGAATCAATCGGCTAGTGAAGGTGCGGACGCTCAACAAGAAAATAAATGTCAGCTGAATCATTCAGCTTCAGAGGCCTGA
Protein Sequence
- >LR48_Vigan01g003400
MHPRCKCISLPVHSKTTPFPNKNSATFPPPSRQTALHASSNNSSASVNAARTYVFHCPRSRQGDRAALPGKTIPPGVAGSQRGSTGKSRFCNSEEKRRLRSCHVVCERSVRSFNGKKMASSEVSIKGNSVNGKAENSSGGFNGCNDVRNAGGELQNASSSSSARDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADQKRWPNSKWRSLKVRWDETSNVPRPERVSQWKIEPALAPPALNPLPMPRPKRPRSNVVPSSPDSSVLTREASSKVSVDPLPASGFQRVLQGQELSTLRVNFAESNESDTAEKSAWSSAADDEKIDVVSTSRRYGSESWMSMGRHEPTYPDLLSGFGVHGDQASHPSLVDQNGPVANLSRKHFFDREGKHNVLSPWPVVPSSLSLNLLDSNTKVSAQGGDQVRGNLRFSSAFGDYTVLHGHKVDHSHGNFLMPPPLSTQYESPRSRELLPKPISGKPSEVSKPKDSDCKLFGISLLSSPIALDPSVLQRNVAIEPVGHMHTTHQQRTYENDPKSENSRGSKPADGVLIDDHEKPAQTSQPQLKDVQPKSNGGSARSCTKVHKKGIALGRSVDLTKFSAYDELIAELDELFEFGGELTSPQKDWLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSRNEENQSASEGADAQQENKCQLNHSASEA