Information report for LPERR02G27040
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Oryza sativa: LOC_Os02g51880
- Setaria italica: SETIT_016290mg
- Setaria viridis: SEVIR_1G332000v2
- Triticum aestivum: TraesCS6A02G318300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A0D9VL78
- AlphaFoldDB: A0A0D9VL78
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- eggNOG: KOG0029
- STRING: 77586.A0A0D9VL78
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >LPERR02G27040
ATGGAGGAAGGCAACGAGGCGCAGCCGCCGGCCGAATCAGCCGAAGCCTCGGAGCCGCCTCCTCCTCCGGTTCCAATGGACCAGGACGAGGGCCAGGCGGCAGCCGCGGAGCCCATGGAGGGCGGCGAAGCGGAAGGCGCTGCGGCGGATGCCGATCCCATGGAGGATGAAGCGGCGGACGAAGCCGGCGCGGCGGAGACCATGGAGGACGACCCGCCGACGTCCTCGCCGACCCCGTCCGCGCCGTCCGCAACAACAGCCGTCGACGACTCGACCATCGCGCGGAAGCGCCGCCGCCGTAAGAAGCAGTTCCCCGGCATGATCCCCACGGCGGGTGTCCGTGTCCTCCGAGCGGCTGCCTCCGCCCCAACCTCGGCGCATCTCAACGGTGTCCCTCGCCGCCGTGGTCGTCCCCCGACCTCCTCCTCCCTCCGCCTCGCTCGGGAGCTCGATGCCGAGGCCCTCATAGCCCTCGCGGCGGGGTTCCCTGCGGATTCCCTCTCCGAGGACGAGGTCGCCGCTGCCGTCCTCCCGCGCATCGGTGGCGCCGACCAGGCCAACTATCTCGTCGTCCGCAACCACGTCCTCGCGCTCTGGCGCTCAAATCCGCTCTCCCCCGTTGCATCCAACGCCGCGCTCGCCTCCATTCGCGCCGAGCACGCGCACCTCGTCGCCGCTGCACATTCCTTCCTTTCAGACCATGCGTACATCAATTTTGGCCTTGCCCCATCGGTTATTTCCCTCCCACCATGCCCACCGCCTTCCATTCCTCCCCCTTCTGTCCTTATTGTCGGTGCTGGTTTTGCTGGACTCGCTGCTGCACGGCATCTGATGTCCCTTGGCTTCAAGGTCGCCATTGTCGAAGGACGACTGCGCCCCGGCGGCCGCGTTTTTACGAAATCCATGCGCTCCACTGCTGCAGAACATCCTGACATTGCAGCTGCTGCTGACCTTGGAGGTAGTGTGCTCACCGGTATCAATGGGAATCCCCTCGGTGTCATTGCACGGCAGCTTGGGTTTCCACTGCATAAGGTGCGGGACAAGTGCCCGCTGTATCTCCCAGATGGTCGCCCGGTTGACCCTGACATGGACGCTCGTGTTGAGGCTGCCTTTAACCAGCTTCTTGACAAGGTTTGCCAACTTCGGCAGGTTATCGCGGATAGCATCCCACATGGTGTGGATGTGTCACTTGGCATGGCATTGGAGGCATTCCGGGAGGCACATGGTGTCGCTGCTGAGCGAGAGGAACGGATGCTTCTTGACTGGCATCTAGCGAATCTGGAGTATGCCAATGCTGCTCCTCTTGCCGACCTATCTATGGCCTTCTGGGATCAGGATGATCCATATGAAATGGGTGGTGACCACTGCTTTATTCCTGGCGGTAATTCTCGTTTTGTCCGTGCGCTTGCTGATGGCATCCCAATATTCTATGGGCAGAATGTGCGAAGGATACAGTATGGGTGTGATGGTGTGATGGTTTACACTGATAAACAGACTTTCCGTGGTGATATGGTGCTCTGCACAGTGCCCCTTGGTGTGCTTAAGAAGGGTGACATTCAGTTTATGCCTGAGCTACCACCTCAGAAGCGAGAGGCCATCGAGCGATTGGGTTTTGGGTTGCTTAACAAGGTTGTGCTGCTGTTCCCCTATGACTTCTGGGATGGCAGGGTGGATACATTTGGGCACTTGACAGAGGAATCTGGTCAGCGTGGAGAATTCTTTCTCTTCTATAGCTATTCGTCGGTCTCAGGAGGGCCTCTTCTCATTGCGCTTGTTGCTGGGGAATCTGCCATTGAGTTTGAGAAGACATTGCCAGCGGAAAATGTTGAGAAGGTGCTAGACACACTTAGAAAAATATTTTCTCCAAAGGGGATTGAAGTTCCAAAGCCGTTGCAGGCCATATGTACTCGATGGGGCACTGATAAGTTTACATATGGTTCATATTCTTATGTGGCCATTGGATCTTCTGGTGATGATTATGACATTCTGGCAGAGAGTGTAAGTGACAGAGTTTTCTTTGCTGGGGAGGCAACAAATAGGCGGTATCCTGCAACAATGCATGGAGCTTTGCTTAGTGGGTACAGGGAGGCTGCCAACATTGTAAGAGCAGCTAGGAGGAGAGCCAAAAAGGTGGACTCACCTAAGAACATGGATGTTAATGATGAAGTCAAATATGATGTTAAAGTTGACAACATTGATTTGGATGATCTCTTCCGTACTCCTGATGCTGCTTTCGGGGGCTTCTCAGTACTCCATGACCCATCTACCTGTGACCCTGATTCAGTTTCATTGTTGCGTGTTGGAATTGGTGCAAGAAAGTTAGGCTCTGGTTCACTGTTTCTCTATGGCTTAATTACGCGAAAAAATGTAGCCAATTTAGCTGCAATGGATGGTGATGAGCAACGATTGAGTACACTGTACCGAGACTTTGGGACAAAGCTTGTGGCTTTAGATGGCTTAGGTGATTCTGGGTCAAGCCTTATATTGCGGATAAAAGCTGCTGCTAGGAAATAA
Protein Sequence
- >LPERR02G27040
MEEGNEAQPPAESAEASEPPPPPVPMDQDEGQAAAAEPMEGGEAEGAAADADPMEDEAADEAGAAETMEDDPPTSSPTPSAPSATTAVDDSTIARKRRRRKKQFPGMIPTAGVRVLRAAASAPTSAHLNGVPRRRGRPPTSSSLRLARELDAEALIALAAGFPADSLSEDEVAAAVLPRIGGADQANYLVVRNHVLALWRSNPLSPVASNAALASIRAEHAHLVAAAHSFLSDHAYINFGLAPSVISLPPCPPPSIPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKSMRSTAAEHPDIAAAADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDARVEAAFNQLLDKVCQLRQVIADSIPHGVDVSLGMALEAFREAHGVAAEREERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSRFVRALADGIPIFYGQNVRRIQYGCDGVMVYTDKQTFRGDMVLCTVPLGVLKKGDIQFMPELPPQKREAIERLGFGLLNKVVLLFPYDFWDGRVDTFGHLTEESGQRGEFFLFYSYSSVSGGPLLIALVAGESAIEFEKTLPAENVEKVLDTLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSYSYVAIGSSGDDYDILAESVSDRVFFAGEATNRRYPATMHGALLSGYREAANIVRAARRRAKKVDSPKNMDVNDEVKYDVKVDNIDLDDLFRTPDAAFGGFSVLHDPSTCDPDSVSLLRVGIGARKLGSGSLFLYGLITRKNVANLAAMDGDEQRLSTLYRDFGTKLVALDGLGDSGSSLILRIKAAARK